| cilium morphogenesis | GO:0060271 | 85 | 0.213 | |
| signal transduction | GO:0007165 | 455 | 0.110 | |
| epithelial cilium movement | GO:0003351 | 15 | 0.110 | |
| smoothened signaling pathway | GO:0007224 | 30 | 0.106 | |
| urogenital system development | GO:0001655 | 97 | 0.104 | |
| tube morphogenesis | GO:0035239 | 349 | 0.083 | |
| meiotic nuclear division | GO:0007126 | 4 | 0.080 | |
| regulation of developmental process | GO:0050793 | 247 | 0.079 | |
| microtubule based movement | GO:0007018 | 33 | 0.071 | |
| regulation of establishment of protein localization | GO:0070201 | 4 | 0.064 | |
| aging | GO:0007568 | 2 | 0.063 | |
| regulation of oligodendrocyte differentiation | GO:0048713 | 1 | 0.062 | |
| positive regulation of transport | GO:0051050 | 2 | 0.062 | |
| nuclear import | GO:0051170 | 3 | 0.061 | |
| regulation of cytokine production | GO:0001817 | 3 | 0.060 | |
| transport | GO:0006810 | 220 | 0.058 | |
| regulation of cell communication | GO:0010646 | 232 | 0.057 | |
| establishment of endothelial barrier | GO:0061028 | 3 | 0.055 | |
| single organism metabolic process | GO:0044710 | 217 | 0.053 | |
| larval development | GO:0002164 | 2 | 0.051 | |
| maintenance of location | GO:0051235 | 4 | 0.051 | |
| regulation of protein transport | GO:0051223 | 3 | 0.050 | |
| regulation of response to stimulus | GO:0048583 | 269 | 0.047 | |
| cilium movement | GO:0003341 | 26 | 0.047 | |
| cognition | GO:0050890 | 1 | 0.045 | |
| regulation of metabolic process | GO:0019222 | 359 | 0.044 | |
| digestive system development | GO:0055123 | 289 | 0.044 | |
| nephron tubule morphogenesis | GO:0072078 | 1 | 0.043 | |
| regulation of nucleotide catabolic process | GO:0030811 | 2 | 0.043 | |
| guanosine containing compound metabolic process | GO:1901068 | 4 | 0.042 | |
| gtp catabolic process | GO:0006184 | 2 | 0.041 | |
| heterocycle metabolic process | GO:0046483 | 290 | 0.041 | |
| nucleocytoplasmic transport | GO:0006913 | 4 | 0.041 | |
| renal tubule morphogenesis | GO:0061333 | 1 | 0.038 | |
| positive regulation of cellular catabolic process | GO:0031331 | 3 | 0.038 | |
| regulation of signaling | GO:0023051 | 235 | 0.037 | |
| epithelial cilium movement involved in determination of left right asymmetry | GO:0060287 | 8 | 0.037 | |
| epithelial tube morphogenesis | GO:0060562 | 148 | 0.037 | |
| negative regulation of kinase activity | GO:0033673 | 4 | 0.037 | |
| regulation of nucleoside metabolic process | GO:0009118 | 2 | 0.036 | |
| cellular localization | GO:0051641 | 97 | 0.036 | |
| negative regulation of gliogenesis | GO:0014014 | 1 | 0.036 | |
| negative regulation of cellular process | GO:0048523 | 283 | 0.036 | |
| regulation of cell shape | GO:0008360 | 1 | 0.035 | |
| regulation of gtp catabolic process | GO:0033124 | 2 | 0.034 | |
| regulation of glial cell differentiation | GO:0045685 | 4 | 0.034 | |
| response to chemical | GO:0042221 | 320 | 0.034 | |
| cellular nitrogen compound metabolic process | GO:0034641 | 290 | 0.033 | |
| lipid storage | GO:0019915 | 1 | 0.033 | |
| regulation of purine nucleotide catabolic process | GO:0033121 | 2 | 0.033 | |
| positive regulation of translation | GO:0045727 | 1 | 0.033 | |
| small molecule metabolic process | GO:0044281 | 77 | 0.033 | |
| regulation of stem cell differentiation | GO:2000736 | 4 | 0.033 | |
| single organism localization | GO:1902578 | 225 | 0.033 | |
| cell morphogenesis | GO:0000902 | 289 | 0.032 | |
| hormone secretion | GO:0046879 | 2 | 0.032 | |
| nitrogen compound metabolic process | GO:0006807 | 319 | 0.031 | |
| negative regulation of biological process | GO:0048519 | 304 | 0.031 | |
| regulation of dna replication | GO:0006275 | 3 | 0.031 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 1 | 0.030 | |
| b cell activation | GO:0042113 | 2 | 0.030 | |
| single organism nuclear import | GO:1902593 | 3 | 0.029 | |
| positive regulation of catabolic process | GO:0009896 | 4 | 0.029 | |
| gastrulation | GO:0007369 | 208 | 0.029 | |
| stem cell maintenance | GO:0019827 | 4 | 0.029 | |
| cellular macromolecule metabolic process | GO:0044260 | 391 | 0.029 | |
| leukocyte proliferation | GO:0070661 | 1 | 0.029 | |
| gtp metabolic process | GO:0046039 | 4 | 0.029 | |
| nuclear export | GO:0051168 | 1 | 0.028 | |
| establishment of protein localization to organelle | GO:0072594 | 4 | 0.028 | |
| positive regulation of metabolic process | GO:0009893 | 108 | 0.028 | |
| positive regulation of cell cycle | GO:0045787 | 3 | 0.028 | |
| cellular aromatic compound metabolic process | GO:0006725 | 295 | 0.028 | |
| lymphocyte proliferation | GO:0046651 | 1 | 0.027 | |
| protein metabolic process | GO:0019538 | 183 | 0.027 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 271 | 0.027 | |
| nuclear transport | GO:0051169 | 4 | 0.026 | |
| intracellular signal transduction | GO:0035556 | 85 | 0.026 | |
| small gtpase mediated signal transduction | GO:0007264 | 8 | 0.025 | |
| guanosine containing compound catabolic process | GO:1901069 | 2 | 0.025 | |
| regulation of rho protein signal transduction | GO:0035023 | 2 | 0.025 | |
| single organism transport | GO:0044765 | 206 | 0.025 | |
| organic cyclic compound metabolic process | GO:1901360 | 301 | 0.025 | |
| cellular component morphogenesis | GO:0032989 | 336 | 0.025 | |
| regulation of cellular metabolic process | GO:0031323 | 320 | 0.025 | |
| cellular macromolecule biosynthetic process | GO:0034645 | 224 | 0.025 | |
| organelle fission | GO:0048285 | 23 | 0.024 | |
| response to organic substance | GO:0010033 | 153 | 0.024 | |
| negative regulation of signal transduction | GO:0009968 | 94 | 0.024 | |
| meiotic cell cycle process | GO:1903046 | 3 | 0.024 | |
| heart development | GO:0007507 | 313 | 0.024 | |
| toll like receptor signaling pathway | GO:0002224 | 4 | 0.024 | |
| multicellular organismal signaling | GO:0035637 | 22 | 0.023 | |
| negative regulation of protein phosphorylation | GO:0001933 | 4 | 0.023 | |
| cell projection organization | GO:0030030 | 284 | 0.023 | |
| modification dependent protein catabolic process | GO:0019941 | 3 | 0.023 | |
| regulation of nucleobase containing compound metabolic process | GO:0019219 | 250 | 0.023 | |
| regulation of cell differentiation | GO:0045595 | 142 | 0.023 | |
| morphogenesis of an epithelium | GO:0002009 | 333 | 0.023 | |
| chordate embryonic development | GO:0043009 | 271 | 0.022 | |
| regulation of gtpase activity | GO:0043087 | 2 | 0.022 | |
| response to stress | GO:0006950 | 263 | 0.022 | |
| protein modification process | GO:0036211 | 100 | 0.022 | |
| regulation of primary metabolic process | GO:0080090 | 311 | 0.022 | |
| cellular component disassembly | GO:0022411 | 1 | 0.022 | |
| regulation of signal transduction | GO:0009966 | 225 | 0.022 | |
| negative regulation of metabolic process | GO:0009892 | 86 | 0.022 | |
| spermatid development | GO:0007286 | 2 | 0.022 | |
| response to oxygen containing compound | GO:1901700 | 55 | 0.022 | |
| negative regulation of stem cell differentiation | GO:2000737 | 2 | 0.022 | |
| regulation of protein targeting | GO:1903533 | 2 | 0.021 | |
| female meiotic division | GO:0007143 | 2 | 0.021 | |
| regulation of cytoplasmic transport | GO:1903649 | 4 | 0.021 | |
| liver development | GO:0001889 | 96 | 0.021 | |
| oxoacid metabolic process | GO:0043436 | 31 | 0.021 | |
| regulation of cell activation | GO:0050865 | 1 | 0.021 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.021 | |
| ras protein signal transduction | GO:0007265 | 7 | 0.020 | |
| negative regulation of protein kinase activity | GO:0006469 | 4 | 0.020 | |
| nucleobase containing compound metabolic process | GO:0006139 | 274 | 0.020 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 4 | 0.020 | |
| transmission of nerve impulse | GO:0019226 | 19 | 0.020 | |
| protein complex disassembly | GO:0043241 | 1 | 0.020 | |
| positive regulation of tyrosine phosphorylation of stat3 protein | GO:0042517 | 1 | 0.020 | |
| gene expression | GO:0010467 | 252 | 0.020 | |
| adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains | GO:0002460 | 4 | 0.020 | |
| negative regulation of protein transport | GO:0051224 | 3 | 0.020 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 7 | 0.020 | |
| organic substance transport | GO:0071702 | 58 | 0.019 | |
| negative regulation of small gtpase mediated signal transduction | GO:0051058 | 1 | 0.019 | |
| positive regulation of gtp catabolic process | GO:0033126 | 1 | 0.019 | |
| regulation of macromolecule metabolic process | GO:0060255 | 317 | 0.019 | |
| cell morphogenesis involved in neuron differentiation | GO:0048667 | 163 | 0.019 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 0 | 0.019 | |
| protein import into nucleus | GO:0006606 | 3 | 0.019 | |
| peptide transport | GO:0015833 | 1 | 0.019 | |
| negative regulation of ras protein signal transduction | GO:0046580 | 1 | 0.019 | |
| cell surface receptor signaling pathway | GO:0007166 | 325 | 0.019 | |
| regulation of leukocyte mediated immunity | GO:0002703 | 1 | 0.019 | |
| specification of symmetry | GO:0009799 | 204 | 0.019 | |
| protein acetylation | GO:0006473 | 2 | 0.019 | |
| regulation of cellular amine metabolic process | GO:0033238 | 0 | 0.018 | |
| positive regulation of secretion | GO:0051047 | 1 | 0.018 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 3 | 0.018 | |
| positive regulation of gtpase activity | GO:0043547 | 1 | 0.018 | |
| establishment of localization in cell | GO:0051649 | 77 | 0.018 | |
| regulation of protein modification by small protein conjugation or removal | GO:1903320 | 3 | 0.018 | |
| macromolecular complex subunit organization | GO:0043933 | 74 | 0.018 | |
| cell part morphogenesis | GO:0032990 | 246 | 0.018 | |
| cellular amine metabolic process | GO:0044106 | 2 | 0.018 | |
| embryonic organ morphogenesis | GO:0048562 | 274 | 0.018 | |
| immunoglobulin mediated immune response | GO:0016064 | 3 | 0.018 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 3 | 0.018 | |
| mononuclear cell proliferation | GO:0032943 | 1 | 0.018 | |
| organic acid metabolic process | GO:0006082 | 31 | 0.018 | |
| gliogenesis | GO:0042063 | 45 | 0.018 | |
| cellular ketone metabolic process | GO:0042180 | 11 | 0.017 | |
| renal system development | GO:0072001 | 94 | 0.017 | |
| cellular nitrogen compound biosynthetic process | GO:0044271 | 218 | 0.017 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 2 | 0.017 | |
| multicellular organism growth | GO:0035264 | 4 | 0.017 | |
| regulation of protein localization to nucleus | GO:1900180 | 2 | 0.017 | |
| regulation of mrna processing | GO:0050684 | 3 | 0.017 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 1 | 0.017 | |
| positive regulation of biological process | GO:0048518 | 253 | 0.017 | |
| establishment of localization | GO:0051234 | 244 | 0.017 | |
| centrosome organization | GO:0051297 | 1 | 0.017 | |
| negative regulation of cytokine production | GO:0001818 | 1 | 0.017 | |
| regulation of cyclin dependent protein serine threonine kinase activity | GO:0000079 | 1 | 0.017 | |
| spermatid differentiation | GO:0048515 | 2 | 0.017 | |
| regulation of neural precursor cell proliferation | GO:2000177 | 3 | 0.017 | |
| regulation of receptor activity | GO:0010469 | 2 | 0.017 | |
| somatic stem cell maintenance | GO:0035019 | 1 | 0.017 | |
| regulation of cellular biosynthetic process | GO:0031326 | 245 | 0.016 | |
| response to carbohydrate | GO:0009743 | 3 | 0.016 | |
| positive regulation of nucleoside metabolic process | GO:0045979 | 1 | 0.016 | |
| amino acid transport | GO:0006865 | 2 | 0.016 | |
| macromolecular complex disassembly | GO:0032984 | 1 | 0.016 | |
| negative regulation of dna metabolic process | GO:0051053 | 4 | 0.016 | |
| internal protein amino acid acetylation | GO:0006475 | 2 | 0.016 | |
| regulation of cell substrate adhesion | GO:0010810 | 1 | 0.016 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 114 | 0.016 | |
| cilium organization | GO:0044782 | 71 | 0.016 | |
| macromolecule modification | GO:0043412 | 111 | 0.016 | |
| regulation of intracellular signal transduction | GO:1902531 | 57 | 0.016 | |
| protein secretion | GO:0009306 | 1 | 0.016 | |
| organonitrogen compound metabolic process | GO:1901564 | 74 | 0.016 | |
| organelle organization | GO:0006996 | 227 | 0.016 | |
| determination of liver left right asymmetry | GO:0071910 | 11 | 0.016 | |
| ensheathment of neurons | GO:0007272 | 18 | 0.015 | |
| regulation of molecular function | GO:0065009 | 70 | 0.015 | |
| microtubule organizing center organization | GO:0031023 | 1 | 0.015 | |
| digestive tract morphogenesis | GO:0048546 | 231 | 0.015 | |
| embryonic organ development | GO:0048568 | 381 | 0.015 | |
| cell cycle | GO:0007049 | 93 | 0.015 | |
| nephron morphogenesis | GO:0072028 | 2 | 0.015 | |
| regulation of protein catabolic process | GO:0042176 | 1 | 0.015 | |
| nitrogen compound transport | GO:0071705 | 23 | 0.015 | |
| cellular protein catabolic process | GO:0044257 | 4 | 0.015 | |
| internal peptidyl lysine acetylation | GO:0018393 | 2 | 0.015 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 3 | 0.015 | |
| regulation of intracellular protein transport | GO:0033157 | 3 | 0.015 | |
| protein import | GO:0017038 | 3 | 0.014 | |
| regulation of cell development | GO:0060284 | 100 | 0.014 | |
| regulation of muscle contraction | GO:0006937 | 3 | 0.014 | |
| cellular protein modification process | GO:0006464 | 100 | 0.014 | |
| neuronal action potential | GO:0019228 | 18 | 0.014 | |
| response to amino acid | GO:0043200 | 2 | 0.014 | |
| protein targeting to nucleus | GO:0044744 | 3 | 0.014 | |
| female gonad development | GO:0008585 | 4 | 0.014 | |
| regulation of hormone secretion | GO:0046883 | 2 | 0.014 | |
| regulation of protein import into nucleus | GO:0042306 | 2 | 0.014 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 80 | 0.014 | |
| regulation of smoothened signaling pathway | GO:0008589 | 18 | 0.014 | |
| nucleic acid templated transcription | GO:0097659 | 181 | 0.014 | |
| cytokinesis | GO:0000910 | 3 | 0.013 | |
| cell cycle arrest | GO:0007050 | 1 | 0.013 | |
| regulation of tube size | GO:0035150 | 2 | 0.013 | |
| innate immune response activating signal transduction | GO:0002758 | 5 | 0.013 | |
| regulation of transporter activity | GO:0032409 | 2 | 0.013 | |
| regulation of peptidyl tyrosine phosphorylation | GO:0050730 | 1 | 0.013 | |
| action potential | GO:0001508 | 19 | 0.013 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 76 | 0.013 | |
| regulation of biosynthetic process | GO:0009889 | 250 | 0.013 | |
| b cell mediated immunity | GO:0019724 | 3 | 0.013 | |
| negative regulation of signaling | GO:0023057 | 96 | 0.013 | |
| kidney development | GO:0001822 | 92 | 0.013 | |
| rna transport | GO:0050658 | 2 | 0.013 | |
| negative regulation of secretion by cell | GO:1903531 | 2 | 0.013 | |
| regulation of multicellular organismal development | GO:2000026 | 223 | 0.013 | |
| positive regulation of jnk cascade | GO:0046330 | 3 | 0.013 | |
| determination of bilateral symmetry | GO:0009855 | 204 | 0.013 | |
| development of primary female sexual characteristics | GO:0046545 | 4 | 0.013 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 3 | 0.013 | |
| rna localization | GO:0006403 | 4 | 0.013 | |
| regulation of microtubule cytoskeleton organization | GO:0070507 | 3 | 0.012 | |
| regulation of cellular protein metabolic process | GO:0032268 | 52 | 0.012 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 59 | 0.012 | |
| regulation of cell matrix adhesion | GO:0001952 | 1 | 0.012 | |
| macromolecular complex assembly | GO:0065003 | 35 | 0.012 | |
| cytoskeleton dependent cytokinesis | GO:0061640 | 3 | 0.012 | |
| g2 m transition of mitotic cell cycle | GO:0000086 | 4 | 0.012 | |
| phosphate containing compound metabolic process | GO:0006796 | 108 | 0.012 | |
| positive regulation of nucleotide catabolic process | GO:0030813 | 1 | 0.012 | |
| negative regulation of cell communication | GO:0010648 | 96 | 0.012 | |
| transmembrane transport | GO:0055085 | 120 | 0.012 | |
| female sex differentiation | GO:0046660 | 4 | 0.012 | |
| regulation of cardiac muscle contraction | GO:0055117 | 2 | 0.012 | |
| release of sequestered calcium ion into cytosol | GO:0051209 | 3 | 0.012 | |
| meiotic spindle organization | GO:0000212 | 1 | 0.012 | |
| mitotic dna damage checkpoint | GO:0044773 | 4 | 0.012 | |
| regulation of catalytic activity | GO:0050790 | 55 | 0.012 | |
| regulation of ras gtpase activity | GO:0032318 | 2 | 0.012 | |
| anion transport | GO:0006820 | 38 | 0.012 | |
| negative regulation of response to stimulus | GO:0048585 | 104 | 0.012 | |
| single organism organelle organization | GO:1902589 | 199 | 0.012 | |
| negative regulation of developmental process | GO:0051093 | 65 | 0.011 | |
| cellular amino acid metabolic process | GO:0006520 | 7 | 0.011 | |
| organic cyclic compound biosynthetic process | GO:1901362 | 223 | 0.011 | |
| regulation of protein metabolic process | GO:0051246 | 56 | 0.011 | |
| nitric oxide metabolic process | GO:0046209 | 2 | 0.011 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 0 | 0.011 | |
| positive regulation of cyclin dependent protein serine threonine kinase activity | GO:0045737 | 1 | 0.011 | |
| cellular protein metabolic process | GO:0044267 | 129 | 0.011 | |
| cell proliferation | GO:0008283 | 80 | 0.011 | |
| nucleobase containing compound biosynthetic process | GO:0034654 | 205 | 0.011 | |
| carboxylic acid metabolic process | GO:0019752 | 22 | 0.011 | |
| regulation of nucleotide metabolic process | GO:0006140 | 17 | 0.011 | |
| regulation of phosphate metabolic process | GO:0019220 | 43 | 0.011 | |
| positive regulation of ras gtpase activity | GO:0032320 | 1 | 0.011 | |
| proximal distal pattern formation | GO:0009954 | 1 | 0.011 | |
| regulation of neurogenesis | GO:0050767 | 87 | 0.011 | |
| regulation of transport | GO:0051049 | 45 | 0.011 | |
| regulation of establishment of planar polarity | GO:0090175 | 4 | 0.011 | |
| regulation of cell proliferation | GO:0042127 | 37 | 0.011 | |
| cellular component movement | GO:0006928 | 335 | 0.011 | |
| epithelial cell differentiation | GO:0030855 | 116 | 0.011 | |
| transcription dna templated | GO:0006351 | 181 | 0.011 | |
| rho protein signal transduction | GO:0007266 | 5 | 0.011 | |
| intra s dna damage checkpoint | GO:0031573 | 1 | 0.011 | |
| regulation of transmembrane transporter activity | GO:0022898 | 2 | 0.011 | |
| synaptic vesicle endocytosis | GO:0048488 | 1 | 0.011 | |
| cell death | GO:0008219 | 121 | 0.011 | |
| regulation of cellular macromolecule biosynthetic process | GO:2000112 | 222 | 0.011 | |
| regulation of metal ion transport | GO:0010959 | 4 | 0.011 | |
| regulation of protein complex assembly | GO:0043254 | 3 | 0.011 | |
| cellular response to xenobiotic stimulus | GO:0071466 | 35 | 0.011 | |
| cellular response to organic substance | GO:0071310 | 105 | 0.011 | |
| regulation of blood vessel size | GO:0050880 | 2 | 0.011 | |
| pancreas development | GO:0031016 | 84 | 0.011 | |
| lipid homeostasis | GO:0055088 | 3 | 0.011 | |
| immune system process | GO:0002376 | 241 | 0.011 | |
| proteasomal protein catabolic process | GO:0010498 | 2 | 0.011 | |
| angiogenesis | GO:0001525 | 158 | 0.011 | |
| protein localization to nucleus | GO:0034504 | 3 | 0.010 | |
| nucleobase containing compound transport | GO:0015931 | 2 | 0.010 | |
| positive regulation of cellular metabolic process | GO:0031325 | 94 | 0.010 | |
| cation transport | GO:0006812 | 81 | 0.010 | |
| axon development | GO:0061564 | 166 | 0.010 | |
| auditory receptor cell fate commitment | GO:0009912 | 4 | 0.010 | |
| protein dephosphorylation | GO:0006470 | 3 | 0.010 | |
| lateral line system development | GO:0048925 | 76 | 0.010 | |
| positive regulation of stress activated protein kinase signaling cascade | GO:0070304 | 3 | 0.010 | |
| regulation of ion transmembrane transporter activity | GO:0032412 | 2 | 0.010 | |
| phagocytosis | GO:0006909 | 3 | 0.010 | |
| cellular respiration | GO:0045333 | 3 | 0.010 | |
| synaptic target recognition | GO:0008039 | 1 | 0.010 | |
| single organism intracellular transport | GO:1902582 | 25 | 0.010 | |
| wnt signaling pathway | GO:0016055 | 80 | 0.010 | |
| organic substance biosynthetic process | GO:1901576 | 289 | 0.010 | |
| amine metabolic process | GO:0009308 | 2 | 0.010 | |
