Danio rerio

0 known processes

shox

short stature homeobox

(Aliases: zgc:123182,si:ch211-134k13.1,MGC123182)

shox biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
central nervous system developmentGO:00074173870.311
embryonic organ developmentGO:00485683810.154
cell projection organizationGO:00300302840.150
morphogenesis of an epitheliumGO:00020093330.135
negative regulation of biological processGO:00485193040.129
head developmentGO:00603223030.114
cell morphogenesisGO:00009022890.107
agingGO:000756820.106
embryonic organ morphogenesisGO:00485622740.102
eye developmentGO:00016542770.100
regulation of response to stimulusGO:00485832690.099
cellular component morphogenesisGO:00329893360.098
cell surface receptor signaling pathwayGO:00071663250.095
cell part morphogenesisGO:00329902460.086
cognitionGO:005089010.086
brain developmentGO:00074202930.081
regulation of synaptic plasticityGO:004816710.080
single organism localizationGO:19025782250.076
regulation of macromolecule metabolic processGO:00602553170.075
heart developmentGO:00075073130.072
cell projection morphogenesisGO:00488582440.071
negative regulation of cellular processGO:00485232830.071
maintenance of locationGO:005123540.068
larval developmentGO:000216420.067
signal transductionGO:00071654550.066
response to stressGO:00069502630.064
positive regulation of cellular catabolic processGO:003133130.064
single organism transportGO:00447652060.061
nuclear transportGO:005116940.060
response to abiotic stimulusGO:00096281220.060
cell morphogenesis involved in differentiationGO:00009041950.059
system processGO:00030081850.058
positive regulation of catabolic processGO:000989640.056
establishment of localizationGO:00512342440.055
regulation of nucleotide catabolic processGO:003081120.055
positive regulation of transportGO:005105020.055
response to chemicalGO:00422213200.055
developmental growthGO:00485891660.054
regulation of protein transportGO:005122330.053
nitrogen compound metabolic processGO:00068073190.053
neuron differentiationGO:00301823530.052
heterocycle metabolic processGO:00464832900.051
embryo development ending in birth or egg hatchingGO:00097922710.051
sensory organ developmentGO:00074233930.051
regulation of biological qualityGO:00650082630.050
negative regulation of map kinase activityGO:004340720.050
regulation of nucleoside metabolic processGO:000911820.049
transportGO:00068102200.049
response to external stimulusGO:00096052640.047
generation of neuronsGO:00486993850.046
tube morphogenesisGO:00352393490.046
nucleocytoplasmic transportGO:000691340.046
cellular component movementGO:00069283350.044
cellular aromatic compound metabolic processGO:00067252950.044
negative regulation of protein phosphorylationGO:000193340.044
carbon dioxide transportGO:001567030.043
gtp metabolic processGO:004603940.043
immune system processGO:00023762410.043
regulation of primary metabolic processGO:00800903110.043
cellular response to external stimulusGO:007149620.042
chordate embryonic developmentGO:00430092710.042
regulation of signalingGO:00230512350.042
gtp catabolic processGO:000618420.041
protein polymerizationGO:005125840.040
retina development in camera type eyeGO:00600411460.040
cell motilityGO:00488702440.040
digestive system developmentGO:00551232890.040
axon ensheathment in central nervous systemGO:003229120.039
regulation of reactive oxygen species metabolic processGO:200037720.039
organic cyclic compound metabolic processGO:19013603010.039
cellular component assemblyGO:00226071700.038
multicellular organism growthGO:003526440.038
heterocycle biosynthetic processGO:00181302150.038
guanosine containing compound catabolic processGO:190106920.038
embryonic heart tube developmentGO:00350501330.037
small molecule metabolic processGO:0044281770.037
guanosine containing compound metabolic processGO:190106840.037
regulation of multicellular organism growthGO:004001440.037
regulation of protein catabolic processGO:004217610.037
regulation of cytoplasmic transportGO:190364940.036
positive regulation of biological processGO:00485182530.036
transmembrane transportGO:00550851200.036
cellular localizationGO:0051641970.035
regulation of epithelial cell proliferationGO:005067830.035
cilium morphogenesisGO:0060271850.035
adult behaviorGO:003053420.035
determination of bilateral symmetryGO:00098552040.034
positive regulation of cellular component biogenesisGO:004408930.034
regulation of signal transductionGO:00099662250.034
cellular carbohydrate metabolic processGO:004426240.034
regulation of nitrogen compound metabolic processGO:00511712510.034
regulation of nucleocytoplasmic transportGO:004682220.034
regulation of cell shapeGO:000836010.033
cellular nitrogen compound biosynthetic processGO:00442712180.033
epithelial tube morphogenesisGO:00605621480.033
cellular macromolecule metabolic processGO:00442603910.033
nucleobase containing compound metabolic processGO:00061392740.033
negative regulation of protein kinase activityGO:000646940.033
growthGO:00400071740.033
regulation of purine nucleotide catabolic processGO:003312120.033
cellular biosynthetic processGO:00442492860.033
regulation of reproductive processGO:200024140.033
cellular response to nutrient levelsGO:003166920.033
cell morphogenesis involved in neuron differentiationGO:00486671630.032
cellular nitrogen compound metabolic processGO:00346412900.032
regulation of multicellular organismal processGO:00512392770.032
camera type eye developmentGO:00430102220.032
skeletal muscle organ developmentGO:0060538780.031
cellular component biogenesisGO:00440851780.031
cation transmembrane transportGO:0098655650.031
proteolysis involved in cellular protein catabolic processGO:005160330.031
regulation of synapse organizationGO:005080730.031
neuron projection morphogenesisGO:00488121610.031
sensory perception of chemical stimulusGO:000760630.031
embryonic heart tube morphogenesisGO:00031431080.031
neuron developmentGO:00486662620.031
regulation of multicellular organismal developmentGO:20000262230.030
regulation of cellular macromolecule biosynthetic processGO:20001122220.030
carbohydrate homeostasisGO:003350010.030
digestive tract developmentGO:00485652650.030
establishment of protein localization to organelleGO:007259440.030
cellular response to extracellular stimulusGO:003166820.029
amine metabolic processGO:000930820.029
response to alkaloidGO:004327920.029
synaptic growth at neuromuscular junctionGO:005112420.029
single organism organelle organizationGO:19025891990.029
organonitrogen compound metabolic processGO:1901564740.029
rna biosynthetic processGO:00327741810.029
developmental growth involved in morphogenesisGO:0060560860.029
cellular amine metabolic processGO:004410620.028
lipid storageGO:001991510.028
regulation of metabolic processGO:00192223590.028
positive regulation of cytosolic calcium ion concentrationGO:000720440.028
protein localization to nucleusGO:003450430.027
regulation of intracellular protein transportGO:003315730.027
muscle tissue developmentGO:00605371100.027
organelle organizationGO:00069962270.027
sequestering of metal ionGO:005123830.027
cellular ketone metabolic processGO:0042180110.027
striated muscle cell differentiationGO:00511461290.027
localization of cellGO:00516742440.026
gene expressionGO:00104672520.026
heart loopingGO:0001947940.026
response to organic substanceGO:00100331530.026
tissue remodelingGO:004877140.026
cytoskeleton dependent cytokinesisGO:006164030.026
regulation of cell communicationGO:00106462320.026
carboxylic acid metabolic processGO:0019752220.026
positive regulation of cellular processGO:00485222010.026
determination of heart left right asymmetryGO:00613711170.025
response to drugGO:004249330.025
ear developmentGO:00435831270.025
modification dependent protein catabolic processGO:001994130.025
muscle cell developmentGO:00550011150.025
negative regulation of protein serine threonine kinase activityGO:007190120.025
regulation of nucleobase containing compound metabolic processGO:00192192500.025
negative regulation of mapk cascadeGO:004340940.025
regulation of synapse assemblyGO:005196330.025
regulation of protein complex assemblyGO:004325430.025
inner ear developmentGO:00488391260.025
axonogenesisGO:00074091520.025
programmed cell deathGO:00125011190.025
regulation of nucleic acid templated transcriptionGO:19035062130.025
protein importGO:001703830.025
regulation of dendrite developmentGO:005077330.024
regulation of cellular amino acid metabolic processGO:000652100.024
oxoacid metabolic processGO:0043436310.024
regulation of establishment of protein localizationGO:007020140.024
proteasomal protein catabolic processGO:001049820.024
chemical homeostasisGO:0048878490.024
specification of symmetryGO:00097992040.024
response to hydrogen peroxideGO:004254230.024
mitochondrion organizationGO:000700540.024
dorsal ventral pattern formationGO:00099531250.024
actin polymerization or depolymerizationGO:000815420.024
regulation of cellular carbohydrate metabolic processGO:001067540.024
inorganic cation transmembrane transportGO:0098662500.024
negative regulation of kinase activityGO:003367340.023
stem cell proliferationGO:007208940.023
positive regulation of map kinase activityGO:004340630.023
autophagyGO:000691440.023
protein localization to plasma membraneGO:007265910.023
regulation of synaptic growth at neuromuscular junctionGO:000858210.023
multicellular organismal signalingGO:0035637220.022
ion transportGO:00068111140.022
proteasome mediated ubiquitin dependent protein catabolic processGO:004316120.022
regulation of cellular amine metabolic processGO:003323800.022
biosynthetic processGO:00090582940.022
response to glucocorticoidGO:005138410.022
sensory organ morphogenesisGO:00905962000.022
protein metabolic processGO:00195381830.022
cellular protein catabolic processGO:004425740.022
muscle structure developmentGO:00610611960.022
transcription dna templatedGO:00063511810.022
membrane fusionGO:006102520.022
regulation of developmental processGO:00507932470.021
regulation of protein targetingGO:190353320.021
hemopoiesisGO:00300971830.021
regulation of myotube differentiationGO:001083020.021
g protein coupled receptor signaling pathwayGO:0007186740.021
macromolecule biosynthetic processGO:00090592270.021
intracellular signal transductionGO:0035556850.021
cell deathGO:00082191210.021
regulation of gtpase activityGO:004308720.021
homeostatic processGO:00425921420.021
regulation of cellular ketone metabolic processGO:001056570.021
regulation of syncytium formation by plasma membrane fusionGO:006014220.021
protein heterooligomerizationGO:005129110.021
protein localizationGO:0008104400.020
single organism metabolic processGO:00447102170.020
regulation of gtp catabolic processGO:003312420.020
heart morphogenesisGO:00030071560.020
regulation of rna metabolic processGO:00512522240.020
regulation of proteolysis involved in cellular protein catabolic processGO:190305010.020
response to carbohydrateGO:000974330.020
response to corticosteroidGO:003196010.020
protein targeting to membraneGO:000661210.020
cellular response to reactive oxygen speciesGO:003461420.020
organic substance biosynthetic processGO:19015762890.020
rna metabolic processGO:00160702190.020
transcription from rna polymerase ii promoterGO:0006366800.020
reactive oxygen species biosynthetic processGO:190340910.020
regionalizationGO:00030022740.020
neuron projection developmentGO:00311751800.020
cellular response to starvationGO:000926710.020
muscle cell differentiationGO:00426921390.020
cellular amino acid metabolic processGO:000652070.020
cellular macromolecule biosynthetic processGO:00346452240.019
establishment of localization in cellGO:0051649770.019
carbohydrate biosynthetic processGO:001605110.019
regulation of gene expressionGO:00104682650.019
digestive tract morphogenesisGO:00485462310.019
regulation of cytokine productionGO:000181730.019
negative regulation of signal transductionGO:0009968940.019
regulation of cellular metabolic processGO:00313233200.019
chemosensory behaviorGO:000763510.019
gas transportGO:001566930.019
notochord developmentGO:0030903540.019
embryonic skeletal system developmentGO:0048706970.019
regulation of blood vessel sizeGO:005088020.019
hematopoietic or lymphoid organ developmentGO:00485341910.019
regulation of transmembrane transporter activityGO:002289820.018
smooth muscle contractionGO:000693920.018
single organism nuclear importGO:190259330.018
positive regulation of purine nucleotide catabolic processGO:003312310.018
nuclear importGO:005117030.018
single organism membrane fusionGO:004480120.018
negative regulation of nitrogen compound metabolic processGO:0051172590.018
regulation of biosynthetic processGO:00098892500.018
organic acid metabolic processGO:0006082310.018
regulation of metal ion transportGO:001095940.018
cytoskeleton organizationGO:0007010960.018
apoptotic processGO:00069151160.018
nuclear exportGO:005116810.018
nucleobase containing compound biosynthetic processGO:00346542050.018
regulation of rna biosynthetic processGO:20011412130.018
regulation of cell activationGO:005086510.018
organelle fusionGO:004828430.018
midbrain developmentGO:0030901280.017
regulation of tube sizeGO:003515020.017
regulation of cellular component organizationGO:0051128860.017
embryonic cranial skeleton morphogenesisGO:0048701900.017
organic cyclic compound biosynthetic processGO:19013622230.017
positive regulation of cellular amino acid metabolic processGO:004576400.017
cell substrate adhesionGO:003158940.017
behaviorGO:0007610740.017
skeletal system developmentGO:00015011810.017
synaptic target recognitionGO:000803910.017
response to hexoseGO:000974630.017
response to uvGO:000941130.017
cell growthGO:0016049570.017
multi organism processGO:00517041340.017
positive regulation of cell communicationGO:0010647560.017
eye morphogenesisGO:00485921440.017
axon developmentGO:00615641660.017
transmission of nerve impulseGO:0019226190.017
heart contractionGO:0060047710.017
regulation of anatomical structure morphogenesisGO:00226031300.017
metal ion transportGO:0030001580.016
regulation of dendrite morphogenesisGO:004881430.016
cell migration involved in gastrulationGO:0042074790.016
extrinsic apoptotic signaling pathwayGO:009719130.016
cytokinesisGO:000091030.016
regulation of peptidyl tyrosine phosphorylationGO:005073010.016
ubiquitin dependent protein catabolic processGO:000651130.016
negative regulation of cytokine productionGO:000181810.016
positive regulation of cytokine productionGO:000181920.016
regulation of phGO:000688530.016
anterior posterior pattern specificationGO:00099521520.016
modification dependent macromolecule catabolic processGO:004363230.016
inorganic ion transmembrane transportGO:0098660570.016
regulation of localizationGO:00328791040.016
deathGO:00162651210.016
negative regulation of response to stimulusGO:00485851040.016
ameboidal type cell migrationGO:00016671430.016
meiotic nuclear divisionGO:000712640.016
actin cytoskeleton organizationGO:0030036630.016
circulatory system processGO:0003013870.015
blood vessel developmentGO:00015682460.015
post embryonic organ developmentGO:004856940.015
protein homooligomerizationGO:005126030.015
cartilage developmentGO:0051216960.015
rna localizationGO:000640340.015
organic substance transportGO:0071702580.015
regulation of mrna processingGO:005068430.015
regulation of nervous system developmentGO:0051960900.015
regulation of cellular biosynthetic processGO:00313262450.015
appendage developmentGO:0048736800.015
cell migrationGO:00164772370.015
regulation of protein polymerizationGO:003227120.015
protein stabilizationGO:005082120.015
regulation of carbohydrate metabolic processGO:000610940.015
phosphate containing compound metabolic processGO:00067961080.015
exocytosisGO:000688710.015
macromolecule localizationGO:0033036540.015
response to topologically incorrect proteinGO:003596620.015
inositol lipid mediated signalingGO:004801720.015
regulation of ion transmembrane transporter activityGO:003241220.014
negative regulation of macromolecule metabolic processGO:0010605760.014
aromatic compound biosynthetic processGO:00194382170.014
wound healingGO:0042060900.014
spinal cord developmentGO:0021510460.014
nucleic acid metabolic processGO:00903042440.014
female sex differentiationGO:004666040.014
cellular response to oxygen levelsGO:007145310.014
locomotionGO:00400113130.014
negative regulation of metabolic processGO:0009892860.014
regulation of transcription dna templatedGO:00063552130.014
positive regulation of gtp catabolic processGO:003312610.014
hindbrain developmentGO:0030902910.014
convergent extensionGO:00600261180.014
regulation of protein import into nucleusGO:004230620.014
protein targeting to nucleusGO:004474430.014
sleepGO:003043110.014
protein secretionGO:000930610.014
regenerationGO:0031099910.014
cellular component disassemblyGO:002241110.014
regulation of protein localization to nucleusGO:190018020.014
negative regulation of signalingGO:0023057960.014
positive regulation of secretionGO:005104710.014
blood circulationGO:0008015870.013
protein import into nucleusGO:000660630.013
wnt signaling pathwayGO:0016055800.013
positive regulation of epithelial cell proliferationGO:005067910.013
regulation of inflammatory responseGO:005072720.013
mitotic cell cycle processGO:1903047480.013
gastrulationGO:00073692080.013
positive regulation of gtpase activityGO:004354710.013
positive regulation of nucleoside metabolic processGO:004597910.013
cytosolic calcium ion transportGO:006040130.013
positive regulation of cytoskeleton organizationGO:005149530.013
regulation of bindingGO:005109830.013
retina morphogenesis in camera type eyeGO:0060042790.013
inner ear morphogenesisGO:0042472630.013
taxisGO:00423301090.013
positive regulation of cellular amine metabolic processGO:003324000.013
calcium ion transmembrane transportGO:0070588130.013
cilium organizationGO:0044782710.013
cell matrix adhesionGO:000716040.013
heart processGO:0003015710.013
skeletal system morphogenesisGO:00487051020.013
negative chemotaxisGO:005091910.013
cellular protein metabolic processGO:00442671290.013
positive regulation of nucleotide catabolic processGO:003081310.013
regulation of calcium ion transportGO:005192420.013
immune system developmentGO:00025201910.013
blood vessel morphogenesisGO:00485142160.013
glucose homeostasisGO:004259310.013
production of molecular mediator of immune responseGO:000244020.013
muscle organ developmentGO:00075171010.012
neurological system processGO:0050877620.012
mesenchyme developmentGO:00604851270.012
regulation of transcription from rna polymerase ii promoterGO:00063571140.012
enzyme linked receptor protein signaling pathwayGO:00071671060.012
regulation of system processGO:0044057400.012
angiogenesisGO:00015251580.012
regulation of cellular protein catabolic processGO:190336210.012
negative regulation of axon extension involved in axon guidanceGO:004884310.012
stem cell maintenanceGO:001982740.012
chloride transmembrane transportGO:190247640.012
oocyte anterior posterior axis specificationGO:000731440.012
regulation of blood pressureGO:000821710.012
central nervous system neuron differentiationGO:0021953740.012
calcium ion transport into cytosolGO:006040230.012
response to glucoseGO:000974930.012
regulation of cell projection assemblyGO:006049140.012
development of primary female sexual characteristicsGO:004654540.012
skeletal muscle tissue developmentGO:0007519670.012
nucleic acid templated transcriptionGO:00976591810.012
positive regulation of peptidyl tyrosine phosphorylationGO:005073110.012
neuron projection extensionGO:1990138450.012
embryonic limb morphogenesisGO:003032620.012
nitric oxide metabolic processGO:004620920.012
olfactory bulb developmentGO:002177240.012
vasculature developmentGO:00019442780.012
organelle assemblyGO:00709251100.012
positive regulation of cell cycleGO:004578730.012
neuronal action potentialGO:0019228180.012
leukocyte proliferationGO:007066110.012
small gtpase mediated signal transductionGO:000726480.012
ion transmembrane transportGO:0034220910.012
somite developmentGO:0061053960.012
response to monosaccharideGO:003428430.011
cilium assemblyGO:0042384580.011
establishment of protein localization to plasma membraneGO:009000210.011
nitric oxide biosynthetic processGO:000680920.011
multicellular organismal response to stressGO:003355520.011
negative regulation of apoptotic processGO:0043066550.011
astrocyte differentiationGO:004870810.011
negative regulation of cell communicationGO:0010648960.011
actomyosin structure organizationGO:0031032530.011
cellular response to organic substanceGO:00713101050.011
fin developmentGO:0033333770.011
response to oxygen containing compoundGO:1901700550.011
actin filament based movementGO:003004810.011
regulation of programmed cell deathGO:00430671010.011
adherens junction organizationGO:003433240.011
response to endogenous stimulusGO:0009719830.011
regulation of extrinsic apoptotic signaling pathwayGO:200123630.011
sodium ion importGO:009736930.011
negative regulation of extrinsic apoptotic signaling pathwayGO:200123720.011
regulation of transporter activityGO:003240920.011
negative regulation of defense responseGO:003134820.011
striated muscle cell developmentGO:00550021080.011
regulation of mrna splicing via spliceosomeGO:004802430.011
alternative mrna splicing via spliceosomeGO:000038010.011
regulation of organ growthGO:004662030.011
gastrulation with mouth forming secondGO:0001702440.011
cellular response to chemical stimulusGO:00708871570.011
regulation of skeletal muscle tissue developmentGO:004864140.011
female gonad developmentGO:000858540.011
toxin transportGO:190199820.011
activation of mapk activityGO:000018730.011
long chain fatty acid metabolic processGO:000167610.011
cortical cytoskeleton organizationGO:003086510.011
hormone secretionGO:004687920.011
superoxide metabolic processGO:000680120.011
negative regulation of cellular metabolic processGO:0031324770.011
response to inorganic substanceGO:0010035380.011
ras protein signal transductionGO:000726570.011
positive regulation of apoptotic signaling pathwayGO:200123510.011
forebrain developmentGO:0030900960.011
negative regulation of cell deathGO:0060548600.011
positive regulation of secretion by cellGO:190353210.011
regulation of alternative mrna splicing via spliceosomeGO:000038110.011
protein depolymerizationGO:005126110.011
locomotory behaviorGO:0007626340.011
negative regulation of epithelial cell proliferationGO:005068010.011
macromolecular complex disassemblyGO:003298410.011
cytoplasm organizationGO:000702840.011
embryonic viscerocranium morphogenesisGO:0048703520.011
regulation of autophagyGO:001050630.011
cortical actin cytoskeleton organizationGO:003086610.011
single organism cellular localizationGO:1902580460.011
response to external biotic stimulusGO:0043207970.011
cranial ganglion developmentGO:006155030.011
positive regulation of wound healingGO:009030310.011
lipid homeostasisGO:005508830.010
muscle fiber developmentGO:0048747520.010
cell agingGO:000756920.010
regulation of filopodium assemblyGO:005148920.010
regulation of neuron migrationGO:200122220.010
regulation of macromolecule biosynthetic processGO:00105562250.010
peptide metabolic processGO:000651810.010
regulation of heart contractionGO:0008016320.010
somatic muscle developmentGO:000752540.010
determination of left right symmetryGO:00073681790.010
mitotic cytokinesisGO:000028130.010
response to amino acidGO:004320020.010
i kappab kinase nf kappab signalingGO:000724940.010
phagocytosisGO:000690930.010
regulation of locomotionGO:0040012550.010
calcium mediated signalingGO:001972220.010
embryonic skeletal system morphogenesisGO:0048704930.010
fin morphogenesisGO:0033334530.010
olfactory lobe developmentGO:002198840.010

shox disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.057
nervous system diseaseDOID:86300.030
cancerDOID:16200.020
disease of cellular proliferationDOID:1456600.020
organ system cancerDOID:005068600.020
musculoskeletal system diseaseDOID:1700.014
immune system diseaseDOID:291400.012
muscle tissue diseaseDOID:6600.011
myopathyDOID:42300.011
muscular diseaseDOID:008000000.011