Danio rerio

0 known processes

shroom4

shroom family member 4

(Aliases: im:7145757,wu:fe05h01,zgc:194172,zgc:194173)

shroom4 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
morphogenesis of an epitheliumGO:00020093330.291
localization of cellGO:00516742440.274
cellular nitrogen compound metabolic processGO:00346412900.264
regulation of cellular metabolic processGO:00313233200.257
larval developmentGO:000216420.241
head developmentGO:00603223030.214
organic substance biosynthetic processGO:19015762890.210
maintenance of locationGO:005123540.206
tube morphogenesisGO:00352393490.195
embryonic organ morphogenesisGO:00485622740.189
cell motilityGO:00488702440.189
digestive tract morphogenesisGO:00485462310.188
cytokinesisGO:000091030.182
chordate embryonic developmentGO:00430092710.180
ameboidal type cell migrationGO:00016671430.178
digestive system developmentGO:00551232890.175
nucleobase containing compound metabolic processGO:00061392740.171
generation of neuronsGO:00486993850.164
embryonic organ developmentGO:00485683810.156
brain developmentGO:00074202930.155
regulation of signal transductionGO:00099662250.154
signal transductionGO:00071654550.147
biosynthetic processGO:00090582940.143
cell migrationGO:00164772370.143
digestive tract developmentGO:00485652650.140
heterocycle biosynthetic processGO:00181302150.137
regulation of response to stimulusGO:00485832690.135
positive regulation of nitrogen compound metabolic processGO:0051173690.134
actin cytoskeleton organizationGO:0030036630.131
cell surface receptor signaling pathwayGO:00071663250.130
cellular biosynthetic processGO:00442492860.130
response to external stimulusGO:00096052640.124
immune system processGO:00023762410.119
cellular macromolecule metabolic processGO:00442603910.118
central nervous system developmentGO:00074173870.118
small molecule metabolic processGO:0044281770.114
regulation of metabolic processGO:00192223590.110
regulation of signalingGO:00230512350.107
cellular protein catabolic processGO:004425740.103
positive regulation of cellular component biogenesisGO:004408930.101
neuron developmentGO:00486662620.100
cellular component movementGO:00069283350.097
mitochondrion organizationGO:000700540.096
epithelial cell differentiationGO:00308551160.091
stem cell maintenanceGO:001982740.091
cell migration involved in gastrulationGO:0042074790.091
cytoskeleton organizationGO:0007010960.090
neuron differentiationGO:00301823530.089
regulation of cell communicationGO:00106462320.084
regulation of primary metabolic processGO:00800903110.084
locomotionGO:00400113130.083
gastrulationGO:00073692080.083
regulation of stem cell differentiationGO:200073640.083
nitrogen compound metabolic processGO:00068073190.083
hemopoiesisGO:00300971830.082
gene expressionGO:00104672520.082
regulation of establishment of protein localizationGO:007020140.079
actin polymerization or depolymerizationGO:000815420.078
actin filament based movementGO:003004810.076
organic acid metabolic processGO:0006082310.076
cellular macromolecule biosynthetic processGO:00346452240.076
regulation of cellular biosynthetic processGO:00313262450.076
organonitrogen compound metabolic processGO:1901564740.076
protein localization to plasma membraneGO:007265910.073
macromolecule biosynthetic processGO:00090592270.072
negative regulation of cell communicationGO:0010648960.071
response to stressGO:00069502630.071
cellular component biogenesisGO:00440851780.069
response to chemicalGO:00422213200.068
positive regulation of biological processGO:00485182530.068
positive regulation of cellular amino acid metabolic processGO:004576400.067
carboxylic acid metabolic processGO:0019752220.067
cortical actin cytoskeleton organizationGO:003086610.066
nucleic acid templated transcriptionGO:00976591810.066
sensory organ developmentGO:00074233930.064
cellular ketone metabolic processGO:0042180110.063
growthGO:00400071740.062
heart developmentGO:00075073130.062
regulation of cellular ketone metabolic processGO:001056570.061
single organism metabolic processGO:00447102170.060
rna biosynthetic processGO:00327741810.060
extrinsic apoptotic signaling pathwayGO:009719130.060
cell part morphogenesisGO:00329902460.060
cell substrate adhesionGO:003158940.060
regulation of extrinsic apoptotic signaling pathwayGO:200123630.060
convergent extensionGO:00600261180.060
cell morphogenesisGO:00009022890.059
cell projection morphogenesisGO:00488582440.059
guanosine containing compound metabolic processGO:190106840.059
chemosensory behaviorGO:000763510.058
cellular amine metabolic processGO:004410620.058
establishment of localizationGO:00512342440.058
regulation of biological qualityGO:00650082630.058
negative regulation of stem cell differentiationGO:200073720.058
wnt signaling pathwayGO:0016055800.058
oxoacid metabolic processGO:0043436310.057
epithelial tube morphogenesisGO:00605621480.057
hematopoietic or lymphoid organ developmentGO:00485341910.057
regulation of biosynthetic processGO:00098892500.055
regulation of cell shapeGO:000836010.054
actin filament polymerizationGO:003004120.053
modification dependent macromolecule catabolic processGO:004363230.053
cell morphogenesis involved in neuron differentiationGO:00486671630.052
heterocycle metabolic processGO:00464832900.052
regulation of cellular amine metabolic processGO:003323800.051
immune system developmentGO:00025201910.051
phosphate containing compound metabolic processGO:00067961080.051
response to organic substanceGO:00100331530.051
positive regulation of metabolic processGO:00098931080.050
regulation of protein complex assemblyGO:004325430.050
cellular nitrogen compound biosynthetic processGO:00442712180.049
regulation of protein polymerizationGO:003227120.047
proteasome mediated ubiquitin dependent protein catabolic processGO:004316120.046
neuron projection morphogenesisGO:00488121610.046
amine metabolic processGO:000930820.046
somatic stem cell maintenanceGO:003501910.046
regionalizationGO:00030022740.046
negative regulation of signal transductionGO:0009968940.045
cell projection organizationGO:00300302840.045
cell morphogenesis involved in differentiationGO:00009041950.045
deathGO:00162651210.045
cellular response to chemical stimulusGO:00708871570.045
axon developmentGO:00615641660.045
cellular amino acid metabolic processGO:000652070.044
primary neural tube formationGO:001402010.044
negative regulation of signalingGO:0023057960.044
atp catabolic processGO:000620040.044
ubiquitin dependent protein catabolic processGO:000651130.044
cellular protein metabolic processGO:00442671290.044
positive regulation of transportGO:005105020.043
positive regulation of catabolic processGO:000989640.043
cortical cytoskeleton organizationGO:003086510.043
regulation of gene expressionGO:00104682650.043
eye developmentGO:00016542770.043
rna metabolic processGO:00160702190.043
gland developmentGO:00487321430.043
phosphorus metabolic processGO:00067931090.042
camera type eye developmentGO:00430102220.042
developmental growthGO:00485891660.042
regulation of nucleic acid templated transcriptionGO:19035062130.042
protein metabolic processGO:00195381830.041
tube closureGO:006060610.041
nucleic acid metabolic processGO:00903042440.041
adherens junction organizationGO:003433240.041
multicellular organism growthGO:003526440.041
positive regulation of cytoskeleton organizationGO:005149530.041
gtp catabolic processGO:000618420.040
positive regulation of cellular biosynthetic processGO:0031328680.040
guanosine containing compound catabolic processGO:190106920.040
modification dependent protein catabolic processGO:001994130.040
gtp metabolic processGO:004603940.040
actin filament based processGO:0030029640.040
regulation of stem cell proliferationGO:007209120.040
cell fate commitmentGO:0045165990.039
organelle organizationGO:00069962270.039
regulation of cellular amino acid metabolic processGO:000652100.039
axon guidanceGO:0007411860.039
positive regulation of protein complex assemblyGO:003133420.038
nucleocytoplasmic transportGO:000691340.038
axonogenesisGO:00074091520.038
protein targeting to nucleusGO:004474430.037
regulation of rna biosynthetic processGO:20011412130.037
lipid storageGO:001991510.037
regulation of protein catabolic processGO:004217610.036
stem cell proliferationGO:007208940.036
neural tube developmentGO:0021915620.036
cell cycleGO:0007049930.036
regulation of developmental processGO:00507932470.036
nuclear migrationGO:000709730.036
taxisGO:00423301090.036
cytokinetic processGO:003250620.036
regulation of macromolecule metabolic processGO:00602553170.036
regulation of macromolecule biosynthetic processGO:00105562250.035
regulation of synapse assemblyGO:005196330.035
ras protein signal transductionGO:000726570.035
cellular aromatic compound metabolic processGO:00067252950.035
proteolysis involved in cellular protein catabolic processGO:005160330.035
skeletal system developmentGO:00015011810.034
cell fate specificationGO:0001708680.034
endoderm developmentGO:0007492490.034
purine nucleoside monophosphate catabolic processGO:000912840.034
agingGO:000756820.034
polarized epithelial cell differentiationGO:003085940.033
regulation of reproductive processGO:200024140.033
positive regulation of cellular amine metabolic processGO:003324000.033
regulation of organ morphogenesisGO:2000027350.033
cellular protein modification processGO:00064641000.033
renal system developmentGO:0072001940.033
single organism nuclear importGO:190259330.033
transcription dna templatedGO:00063511810.033
aromatic compound biosynthetic processGO:00194382170.033
embryo development ending in birth or egg hatchingGO:00097922710.032
response to abiotic stimulusGO:00096281220.032
mesoderm developmentGO:0007498880.032
establishment of protein localization to organelleGO:007259440.032
regulation of nucleoside metabolic processGO:000911820.032
protein complex subunit organizationGO:0071822460.032
regulation of embryonic developmentGO:0045995470.032
segmentationGO:0035282970.032
lamellipodium assemblyGO:003003210.032
regulation of programmed cell deathGO:00430671010.032
programmed cell deathGO:00125011190.032
positive regulation of protein polymerizationGO:003227320.032
regulation of nucleobase containing compound metabolic processGO:00192192500.032
apical junction assemblyGO:004329710.032
organic cyclic compound biosynthetic processGO:19013622230.032
regulation of localizationGO:00328791040.031
response to woundingGO:00096111160.031
purine ribonucleoside monophosphate catabolic processGO:000916940.031
cellular component morphogenesisGO:00329893360.031
regulation of carbohydrate metabolic processGO:000610940.031
determination of bilateral symmetryGO:00098552040.031
cell matrix adhesionGO:000716040.030
cellular component assemblyGO:00226071700.030
exocytosisGO:000688710.030
actin mediated cell contractionGO:007025210.030
positive regulation of canonical wnt signaling pathwayGO:009026340.030
cytoskeleton dependent cytokinesisGO:006164030.030
phosphorylationGO:0016310690.030
regulation of transcription dna templatedGO:00063552130.030
establishment of protein localization to plasma membraneGO:009000210.030
morphogenesis of an epithelial sheetGO:0002011490.030
protein localization to nucleusGO:003450430.029
macromolecule modificationGO:00434121110.029
morphogenesis of embryonic epitheliumGO:0016331300.029
positive regulation of gtp catabolic processGO:003312610.029
regulation of synapse organizationGO:005080730.029
determination of heart left right asymmetryGO:00613711170.029
cellular response to extracellular stimulusGO:003166820.029
multi organism processGO:00517041340.029
organic cyclic compound metabolic processGO:19013603010.029
regulation of multicellular organism growthGO:004001440.029
regulation of multicellular organismal processGO:00512392770.029
lamellipodium organizationGO:009758110.029
protein import into nucleusGO:000660630.028
regulation of anatomical structure morphogenesisGO:00226031300.028
muscle cell differentiationGO:00426921390.028
nucleoside monophosphate catabolic processGO:000912540.028
nucleobase containing compound biosynthetic processGO:00346542050.028
protein polymerizationGO:005125840.028
regulation of wnt signaling pathwayGO:0030111530.028
chemotaxisGO:00069351040.028
positive regulation of cellular processGO:00485222010.028
cell agingGO:000756920.028
ribonucleoside monophosphate catabolic processGO:000915840.027
regulation of purine nucleotide catabolic processGO:003312120.027
neuron projection guidanceGO:0097485860.027
determination of left right symmetryGO:00073681790.027
protein importGO:001703830.027
regulation of synaptic growth at neuromuscular junctionGO:000858210.027
regulation of wound healingGO:006104120.027
apoptotic signaling pathwayGO:0097190230.027
positive regulation of notch signaling pathwayGO:004574730.026
mitotic cytokinesisGO:000028130.026
hindbrain developmentGO:0030902910.026
regulation of protein transportGO:005122330.026
cellular response to radiationGO:007147840.026
nuclear transportGO:005116940.026
development of primary female sexual characteristicsGO:004654540.026
regulation of microtubule cytoskeleton organizationGO:007050730.025
positive regulation of biosynthetic processGO:0009891680.025
macromolecular complex subunit organizationGO:0043933740.025
specification of symmetryGO:00097992040.025
response to other organismGO:0051707970.025
sensory organ morphogenesisGO:00905962000.025
peptidyl serine modificationGO:001820920.025
body morphogenesisGO:0010171160.024
positive regulation of stress activated protein kinase signaling cascadeGO:007030430.024
embryonic skeletal system developmentGO:0048706970.024
organelle localizationGO:0051640490.024
mechanosensory behaviorGO:000763820.024
regulation of rna metabolic processGO:00512522240.024
myeloid cell homeostasisGO:0002262560.024
diterpenoid metabolic processGO:0016101150.023
epithelial cell developmentGO:0002064420.023
regulation of actin cytoskeleton organizationGO:003295680.023
muscle structure developmentGO:00610611960.023
female sex differentiationGO:004666040.023
secondary metabolic processGO:001974830.023
muscle cell developmentGO:00550011150.023
system processGO:00030081850.023
small gtpase mediated signal transductionGO:000726480.023
positive regulation of cellular catabolic processGO:003133130.023
positive regulation of cellular metabolic processGO:0031325940.022
response to biotic stimulusGO:0009607970.022
protein localizationGO:0008104400.022
negative regulation of cellular processGO:00485232830.022
synaptic target recognitionGO:000803910.022
wound healingGO:0042060900.022
retina development in camera type eyeGO:00600411460.022
regulation of circadian rhythmGO:004275240.022
cellular response to organic substanceGO:00713101050.022
establishment of localization in cellGO:0051649770.022
actin filament organizationGO:0007015150.022
cell divisionGO:0051301200.022
embryonic heart tube developmentGO:00350501330.022
intracellular signal transductionGO:0035556850.022
positive regulation of cell communicationGO:0010647560.022
regulation of cell differentiationGO:00455951420.021
transcription from rna polymerase ii promoterGO:0006366800.021
centrosome organizationGO:005129710.021
actomyosin structure organizationGO:0031032530.021
epithelial cell morphogenesisGO:000338220.021
regulation of cellular protein catabolic processGO:190336210.021
embryonic limb morphogenesisGO:003032620.021
negative regulation of reproductive processGO:200024230.021
regulation of nitrogen compound metabolic processGO:00511712510.021
adult behaviorGO:003053420.021
regulation of gtpase activityGO:004308720.021
nuclear importGO:005117030.021
single organism localizationGO:19025782250.021
regulation of cell activationGO:005086510.020
cell deathGO:00082191210.020
positive regulation of camp metabolic processGO:003081620.020
mitotic cell cycleGO:0000278640.020
formation of primary germ layerGO:0001704620.020
regenerationGO:0031099910.020
regulation of locomotionGO:0040012550.020
mitotic cell cycle processGO:1903047480.020
positive regulation of wound healingGO:009030310.020
single organism transportGO:00447652060.020
camera type eye morphogenesisGO:00485931080.020
negative regulation of protein kinase activityGO:000646940.020
regulation of cell deathGO:00109411030.020
keratinocyte differentiationGO:003021600.020
regulation of peptidyl tyrosine phosphorylationGO:005073010.019
blood vessel developmentGO:00015682460.019
regulation of cellular protein metabolic processGO:0032268520.019
positive regulation of nucleotide catabolic processGO:003081310.019
cranial nerve developmentGO:0021545420.019
ribonucleotide metabolic processGO:0009259270.019
proteasomal protein catabolic processGO:001049820.019
axis specificationGO:0009798430.019
regulation of transcription from rna polymerase ii promoterGO:00063571140.018
regulation of cell projection assemblyGO:006049140.018
mesenchyme developmentGO:00604851270.018
regulation of chromosome segregationGO:005198310.018
regulation of cell fate commitmentGO:0010453220.018
cellular response to external stimulusGO:007149620.018
regulation of cell fate specificationGO:0042659200.018
positive regulation of purine nucleotide catabolic processGO:003312310.018
positive regulation of nucleoside metabolic processGO:004597910.018
organic substance catabolic processGO:1901575280.018
positive regulation of apoptotic signaling pathwayGO:200123510.018
response to endogenous stimulusGO:0009719830.018
negative regulation of programmed cell deathGO:0043069580.018
macromolecule localizationGO:0033036540.018
apoptotic processGO:00069151160.018
phagocytosisGO:000690930.018
regulation of filopodium assemblyGO:005148920.018
embryonic pattern specificationGO:0009880440.018
positive regulation of gtpase activityGO:004354710.018
positive regulation of cell adhesionGO:004578510.018
positive regulation of transcription dna templatedGO:0045893570.018
negative regulation of protein phosphorylationGO:000193340.018
negative regulation of developmental processGO:0051093650.018
regulation of nervous system developmentGO:0051960900.017
stem cell developmentGO:0048864820.017
neuromuscular process controlling balanceGO:005088530.017
regulation of gtp catabolic processGO:003312420.017
anterior posterior pattern specificationGO:00099521520.017
cellular protein complex assemblyGO:0043623190.017
blood vessel morphogenesisGO:00485142160.017
negative regulation of mapk cascadeGO:004340940.017
lateral inhibitionGO:004633110.017
negative regulation of nitrogen compound metabolic processGO:0051172590.017
regulation of nucleotide catabolic processGO:003081120.017
mesoderm morphogenesisGO:0048332510.017
stem cell differentiationGO:00488631170.017
single organism organelle organizationGO:19025891990.017
specification of axis polarityGO:006500140.017
somite developmentGO:0061053960.016
glial cell proliferationGO:001400940.016
establishment of endothelial barrierGO:006102830.016
positive regulation of rna biosynthetic processGO:1902680570.016
regulation of cell substrate adhesionGO:001081010.016
skin developmentGO:0043588540.016
autophagyGO:000691440.016
cardiac cell fate commitmentGO:006091110.016
positive regulation of camp biosynthetic processGO:003081920.016
neuron migrationGO:0001764220.016
microtubule cytoskeleton organizationGO:0000226330.016
positive regulation of nucleic acid templated transcriptionGO:1903508570.016
establishment of blood brain barrierGO:006085620.016
cellular component disassemblyGO:002241110.016
response to external biotic stimulusGO:0043207970.016
protein modification processGO:00362111000.016
cellular response to stressGO:0033554620.016
bmp signaling pathwayGO:0030509520.016
regulation of cellular macromolecule biosynthetic processGO:20001122220.016
female gonad developmentGO:000858540.016
golgi organizationGO:000703010.016
cytosolic calcium ion transportGO:006040130.016
neural tube formationGO:0001841160.016
cell projection assemblyGO:0030031640.016
regulation of meiotic cell cycleGO:005144510.015
cell cycle processGO:0022402530.015
sequestering of metal ionGO:005123830.015
vasculature developmentGO:00019442780.015
leukocyte mediated cytotoxicityGO:000190910.015
regulation of apoptotic processGO:0042981980.015
negative regulation of protein transportGO:005122430.015
synaptic vesicle transportGO:004848910.015
mesoderm formationGO:0001707430.015
canonical wnt signaling pathwayGO:0060070480.015
regulation of proteolysis involved in cellular protein catabolic processGO:190305010.015
lipid homeostasisGO:005508830.015
cellular response to nutrient levelsGO:003166920.015
cellular carbohydrate metabolic processGO:004426240.015
cellular protein localizationGO:0034613200.015
cell growthGO:0016049570.015
endosomal transportGO:001619720.015
negative chemotaxisGO:005091910.015
negative regulation of biological processGO:00485193040.015
positive regulation of stress activated mapk cascadeGO:003287430.015
mechanosensory lateral line system developmentGO:0048881490.015
transmembrane receptor protein serine threonine kinase signaling pathwayGO:0007178680.015
positive regulation of dna metabolic processGO:005105410.015
developmental growth involved in morphogenesisGO:0060560860.015
cell killingGO:000190620.015
cellular localizationGO:0051641970.015
wnt signaling pathway planar cell polarity pathwayGO:006007140.015
transportGO:00068102200.014
endomembrane system organizationGO:0010256130.014
proximal distal pattern formationGO:000995410.014
regulation of bindingGO:005109830.014
forebrain developmentGO:0030900960.014
nucleoside phosphate metabolic processGO:0006753280.014
cell cycle g1 s phase transitionGO:004484310.014
regulation of protein metabolic processGO:0051246560.014
establishment of epithelial cell polarityGO:009016220.014
single organism biosynthetic processGO:0044711710.014
positive regulation of reproductive processGO:200024320.014
positive regulation of synapse assemblyGO:005196510.014
regulation of developmental growthGO:0048638380.014
cell cell signalingGO:0007267520.014
negative regulation of cellular biosynthetic processGO:0031327550.014
sequestering of calcium ionGO:005120830.014
regulation of multicellular organismal developmentGO:20000262230.014
rho protein signal transductionGO:000726650.014
regulation of cytoplasmic transportGO:190364940.014
embryonic hemopoiesisGO:0035162530.014
cellular response to endogenous stimulusGO:0071495680.014
embryonic cranial skeleton morphogenesisGO:0048701900.014
regulation of establishment or maintenance of cell polarityGO:003287820.014
negative regulation of sequestering of calcium ionGO:005128340.014
positive regulation of macromolecule metabolic processGO:0010604930.014
regulation of cell projection organizationGO:0031344440.014
embryonic skeletal system morphogenesisGO:0048704930.014
ear morphogenesisGO:0042471640.013
cellular catabolic processGO:0044248270.013
regulation of protein modification by small protein conjugation or removalGO:190332030.013
skeletal system morphogenesisGO:00487051020.013
homeostatic processGO:00425921420.013
regulation of protein ubiquitinationGO:003139630.013
pharyngeal muscle developmentGO:004328240.013
specification of organ identityGO:001009220.013
erythrocyte homeostasisGO:0034101550.013
regulation of catalytic activityGO:0050790550.013
kidney developmentGO:0001822920.013
embryonic heart tube morphogenesisGO:00031431080.013
release of sequestered calcium ion into cytosolGO:005120930.013
positive regulation of cytosolic calcium ion concentrationGO:000720440.013
positive regulation of cell substrate adhesionGO:001081110.013
organic substance transportGO:0071702580.013
positive regulation of nucleobase containing compound metabolic processGO:0045935690.013
tube formationGO:0035148250.013
regulation of establishment of planar polarityGO:009017540.013
cognitionGO:005089010.013
dorsal ventral pattern formationGO:00099531250.013
enzyme linked receptor protein signaling pathwayGO:00071671060.013
regulation of cyclic nucleotide metabolic processGO:0030799150.013
neural tube patterningGO:0021532330.013
post embryonic organ developmentGO:004856940.013
nephron tubule morphogenesisGO:007207810.013
regulation of cell cycleGO:0051726520.013
macromolecular complex assemblyGO:0065003350.013
positive regulation of peptidyl tyrosine phosphorylationGO:005073110.013
microtubule organizing center organizationGO:003102310.013
microtubule based processGO:0007017600.013
inner ear morphogenesisGO:0042472630.013
positive regulation of leukocyte differentiationGO:190210710.013
positive regulation of signalingGO:0023056560.012
establishment of organelle localizationGO:0051656450.012
negative regulation of extrinsic apoptotic signaling pathwayGO:200123720.012
heart loopingGO:0001947940.012
synaptic vesicle localizationGO:009747910.012
tissue remodelingGO:004877140.012
embryonic eye morphogenesisGO:0048048300.012
neuroblast proliferationGO:000740520.012
regulation of protein localization to plasma membraneGO:190307610.012
synaptic growth at neuromuscular junctionGO:005112420.012
striated muscle cell differentiationGO:00511461290.012
establishment of apical basal cell polarityGO:003508920.012

shroom4 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.031
nervous system diseaseDOID:86300.017
sensory system diseaseDOID:005015500.015
eye and adnexa diseaseDOID:149200.015