Danio rerio

0 known processes

vim

vimentin

(Aliases: cb28)

vim biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
cellular component morphogenesisGO:00329893360.634
Zebrafish Rat
negative regulation of biological processGO:00485193040.584
Mouse
cell morphogenesisGO:00009022890.541
Zebrafish Rat
eye developmentGO:00016542770.541
Mouse
generation of neuronsGO:00486993850.539
Zebrafish Mouse Rat
cellular component movementGO:00069283350.478
Rat
heart morphogenesisGO:00030071560.460
neuron developmentGO:00486662620.449
Zebrafish Mouse Rat
embryonic organ morphogenesisGO:00485622740.446
embryonic heart tube morphogenesisGO:00031431080.425
sensory organ morphogenesisGO:00905962000.390
head developmentGO:00603223030.368
negative regulation of response to stimulusGO:00485851040.359
cell part morphogenesisGO:00329902460.359
Zebrafish Rat
cell morphogenesis involved in neuron differentiationGO:00486671630.312
Rat
renal absorptionGO:007029310.306
mesenchyme developmentGO:00604851270.305
brain developmentGO:00074202930.295
cell morphogenesis involved in differentiationGO:00009041950.282
Rat
response to vitaminGO:003327330.257
Rat
negative regulation of multicellular organismal processGO:0051241690.252
Mouse
embryonic heart tube developmentGO:00350501330.239
neuron differentiationGO:00301823530.224
Zebrafish Mouse Rat
tube morphogenesisGO:00352393490.219
regulation of multicellular organismal processGO:00512392770.200
Mouse Rat
wound healingGO:0042060900.198
Rat
epithelial tube morphogenesisGO:00605621480.180
determination of left right symmetryGO:00073681790.175
negative regulation of epithelial cell migrationGO:001063310.171
lateral line system developmentGO:0048925760.167
morphogenesis of an epitheliumGO:00020093330.159
regulation of biological qualityGO:00650082630.148
cell surface receptor signaling pathwayGO:00071663250.146
Mouse
regulation of cell communicationGO:00106462320.142
camera type eye developmentGO:00430102220.136
Mouse
response to woundingGO:00096111160.123
Rat
taxisGO:00423301090.118
cell projection morphogenesisGO:00488582440.111
Zebrafish Rat
heart developmentGO:00075073130.111
homeostatic processGO:00425921420.110
nucleobase containing compound metabolic processGO:00061392740.107
embryonic organ developmentGO:00485683810.105
central nervous system developmentGO:00074173870.102
Mouse
regenerationGO:0031099910.102
Rat
behaviorGO:0007610740.101
camera type eye morphogenesisGO:00485931080.099
epithelial cell differentiationGO:00308551160.099
Mouse
determination of heart left right asymmetryGO:00613711170.096
neuron projection morphogenesisGO:00488121610.096
Zebrafish Rat
organelle organizationGO:00069962270.094
Zebrafish Mouse
transmission of nerve impulseGO:0019226190.093
heart loopingGO:0001947940.091
regulation of cell differentiationGO:00455951420.089
Mouse Rat
tissue regenerationGO:0042246740.087
Rat
specification of symmetryGO:00097992040.085
chordate embryonic developmentGO:00430092710.085
axon developmentGO:00615641660.083
Rat
nitrogen compound metabolic processGO:00068073190.082
response to stressGO:00069502630.077
Rat
deathGO:00162651210.077
sensory organ developmentGO:00074233930.076
Mouse
inner ear developmentGO:00488391260.076
maintenance of locationGO:005123540.076
cell motilityGO:00488702440.075
Rat
regulation of macromolecule metabolic processGO:00602553170.073
Mouse
one carbon compound transportGO:0019755140.072
cellular component biogenesisGO:00440851780.071
Zebrafish
endomembrane system organizationGO:0010256130.069
organophosphate biosynthetic processGO:0090407230.068
cellular macromolecule metabolic processGO:00442603910.065
embryo development ending in birth or egg hatchingGO:00097922710.065
regulation of signalingGO:00230512350.064
stem cell proliferationGO:007208940.063
signal transductionGO:00071654550.063
Mouse
response to external stimulusGO:00096052640.063
Rat
system processGO:00030081850.061
Zebrafish
membrane invaginationGO:001032410.061
determination of bilateral symmetryGO:00098552040.060
aromatic compound biosynthetic processGO:00194382170.060
negative regulation of endothelial cell migrationGO:001059610.059
regulation of wound healingGO:006104120.058
positive regulation of metabolic processGO:00098931080.056
Mouse
positive regulation of cell adhesionGO:004578510.056
cell adhesionGO:0007155400.055
regulation of localizationGO:00328791040.055
Rat
regulation of ventricular cardiac muscle cell membrane repolarizationGO:006030710.053
regulation of neurogenesisGO:0050767870.053
Mouse Rat
response to corticosteroidGO:003196010.052
single organism localizationGO:19025782250.051
eye morphogenesisGO:00485921440.050
mesenchymal cell developmentGO:0014031780.049
regulation of blood pressureGO:000821710.047
retina morphogenesis in camera type eyeGO:0060042790.045
chemical homeostasisGO:0048878490.045
negative regulation of protein phosphorylationGO:000193340.045
lipid digestionGO:004424130.044
response to chemicalGO:00422213200.043
Rat
regulation of cellular component movementGO:0051270550.043
Rat
gamete generationGO:0007276330.042
muscle cell developmentGO:00550011150.041
Zebrafish
regulation of response to stimulusGO:00485832690.041
regulation of phosphate metabolic processGO:0019220430.041
heterocycle biosynthetic processGO:00181302150.040
positive regulation of cell communicationGO:0010647560.040
skeletal system developmentGO:00015011810.039
lipid storageGO:001991510.039
hindbrain developmentGO:0030902910.039
membrane organizationGO:0061024210.038
locomotionGO:00400113130.037
Rat
stem cell developmentGO:0048864820.037
positive regulation of cellular catabolic processGO:003133130.036
cell substrate adhesionGO:003158940.036
dorsal ventral pattern formationGO:00099531250.036
lateral line developmentGO:0048882660.035
somitogenesisGO:0001756870.034
wnt signaling pathwayGO:0016055800.034
regulation of developmental processGO:00507932470.034
Mouse Rat
central nervous system myelinationGO:002201020.034
guanosine containing compound metabolic processGO:190106840.033
positive regulation of cell differentiationGO:0045597300.033
Rat
actin filament based movementGO:003004810.033
positive regulation of transportGO:005105020.032
regulation of retinoic acid receptor signaling pathwayGO:004838550.032
regulation of phosphorus metabolic processGO:0051174430.032
phagocytosisGO:000690930.032
developmental growthGO:00485891660.031
Rat
negative regulation of response to cytokine stimulusGO:006076120.031
somite developmentGO:0061053960.030
regulation of cell developmentGO:00602841000.030
Mouse Rat
axon guidanceGO:0007411860.029
digestive system developmentGO:00551232890.029
cellular aromatic compound metabolic processGO:00067252950.029
multicellular organismal response to stressGO:003355520.029
renal filtrationGO:0097205100.029
neuroblast proliferationGO:000740520.028
biosynthetic processGO:00090582940.028
response to inorganic substanceGO:0010035380.028
Rat
regulation of cell migrationGO:0030334400.028
Rat
regulation of signal transductionGO:00099662250.028
muscle organ developmentGO:00075171010.028
Zebrafish
single organism cell adhesionGO:0098602290.028
glial cell differentiationGO:0010001420.028
Mouse
single organism metabolic processGO:00447102170.028
fin regenerationGO:0031101510.027
innervationGO:006038430.027
cellular protein metabolic processGO:00442671290.026
multi organism processGO:00517041340.026
Rat
multicellular organismal signalingGO:0035637220.026
cellular response to chemical stimulusGO:00708871570.026
Rat
response to glucocorticoidGO:005138410.025
hematopoietic or lymphoid organ developmentGO:00485341910.025
transportGO:00068102200.025
positive regulation of nucleoside metabolic processGO:004597910.025
midbrain developmentGO:0030901280.025
response to organic substanceGO:00100331530.025
Rat
negative regulation of cell communicationGO:0010648960.025
long chain fatty acid transportGO:001590910.024
neural tube developmentGO:0021915620.024
positive regulation of cell activationGO:005086710.024
cellular biosynthetic processGO:00442492860.024
regulation of protein metabolic processGO:0051246560.024
regulation of cyclin dependent protein serine threonine kinase activityGO:000007910.024
single organism transportGO:00447652060.024
response to growth factorGO:0070848390.024
Rat
negative regulation of cytokine mediated signaling pathwayGO:000196020.023
multicellular organismal reproductive processGO:0048609350.023
Rat
regulation of bindingGO:005109830.023
cellular response to retinoic acidGO:007130010.023
cerebellar granular layer developmentGO:002168130.023
cell migrationGO:00164772370.023
Rat
response to vitamin b3GO:003355220.022
regulation of anatomical structure sizeGO:0090066330.022
embryonic retina morphogenesis in camera type eyeGO:0060059220.022
regulation of cellular protein metabolic processGO:0032268520.022
organelle fusionGO:004828430.022
negative regulation of developmental processGO:0051093650.022
Mouse
response to drugGO:004249330.022
neural nucleus developmentGO:0048857150.022
regulation of heart growthGO:006042020.022
regulation of locomotionGO:0040012550.022
Rat
anterior posterior pattern specificationGO:00099521520.021
negative regulation of cellular processGO:00485232830.021
Mouse
regulation of primary metabolic processGO:00800903110.021
macromolecular complex disassemblyGO:003298410.021
single organismal cell cell adhesionGO:0016337290.021
forebrain developmentGO:0030900960.021
epithelial to mesenchymal transitionGO:0001837210.021
multicellular organism reproductionGO:0032504350.021
Rat
multi organism reproductive processGO:0044703360.021
Rat
positive regulation of positive chemotaxisGO:005092740.021
macromolecular complex subunit organizationGO:0043933740.021
Mouse
positive regulation of biological processGO:00485182530.021
Mouse Rat
regulation of neuron projection developmentGO:0010975400.021
Mouse Rat
positive regulation of gtp catabolic processGO:003312610.021
cellular response to external stimulusGO:007149620.020
regulation of nucleotide catabolic processGO:003081120.020
organelle assemblyGO:00709251100.020
Zebrafish
regulation of cell motilityGO:2000145460.020
Rat
response to endogenous stimulusGO:0009719830.020
Rat
water homeostasisGO:003010440.020
cellular response to fibroblast growth factor stimulusGO:0044344220.020
Rat
regionalizationGO:00030022740.020
cognitionGO:005089010.020
cell cycle g1 s phase transitionGO:004484310.020
regulation of tube sizeGO:003515020.020
positive regulation of wnt signaling pathwayGO:0030177130.019
heart processGO:0003015710.019
Zebrafish
organonitrogen compound metabolic processGO:1901564740.019
lipid localizationGO:0010876110.019
cellular nitrogen compound biosynthetic processGO:00442712180.019
canonical wnt signaling pathwayGO:0060070480.019
neurotransmitter secretionGO:000726920.019
organic substance biosynthetic processGO:19015762890.019
neuron projection developmentGO:00311751800.019
Zebrafish Mouse Rat
developmental cell growthGO:0048588520.019
regulation of protein modification by small protein conjugation or removalGO:190332030.019
positive regulation of multicellular organismal processGO:0051240520.018
Rat
stem cell differentiationGO:00488631170.018
organic cyclic compound metabolic processGO:19013603010.018
negative regulation of mitosisGO:004583930.018
single organism membrane organizationGO:0044802200.018
regulation of canonical wnt signaling pathwayGO:0060828340.018
retina development in camera type eyeGO:00600411460.018
polarized epithelial cell differentiationGO:003085940.018
growthGO:00400071740.018
Rat
cellular component assembly involved in morphogenesisGO:00109271070.018
Zebrafish
phagocytosis engulfmentGO:000691110.018
response to hormoneGO:0009725480.018
Rat
positive regulation of cell developmentGO:0010720250.017
Rat
response to abiotic stimulusGO:00096281220.017
Rat
extracellular matrix organizationGO:0030198270.017
regulation of inflammatory responseGO:005072720.017
protein stabilizationGO:005082120.017
cellular aldehyde metabolic processGO:000608140.017
mesenchymal cell differentiationGO:0048762870.017
phosphorus metabolic processGO:00067931090.017
positive regulation of purine nucleotide metabolic processGO:190054490.017
positive regulation of glial cell proliferationGO:006025210.017
Rat
apical protein localizationGO:004517660.017
response to monosaccharideGO:003428430.017
positive regulation of purine nucleotide catabolic processGO:003312310.017
regulation of multicellular organism growthGO:004001440.016
adult behaviorGO:003053420.016
gene expressionGO:00104672520.016
Mouse
modification dependent macromolecule catabolic processGO:004363230.016
single organism organelle organizationGO:19025891990.016
Zebrafish Mouse
cardiac conductionGO:006133730.016
positive regulation of developmental processGO:0051094500.016
Rat
regulation of purine nucleotide catabolic processGO:003312120.016
cellular component assemblyGO:00226071700.016
Zebrafish
tissue migrationGO:0090130370.016
digestive tract morphogenesisGO:00485462310.016
gtp catabolic processGO:000618420.016
cellular response to endogenous stimulusGO:0071495680.016
Rat
response to fibroblast growth factorGO:0071774220.016
Rat
regulation of glial cell differentiationGO:004568540.015
regulation of apoptotic processGO:0042981980.015
carbon dioxide transportGO:001567030.015
regulation of cell activationGO:005086510.015
single organism membrane fusionGO:004480120.015
cardiac cell developmentGO:0055006210.015
negative regulation of wnt signaling pathwayGO:0030178300.015
peripheral nervous system neuron differentiationGO:0048934280.015
cellular protein modification processGO:00064641000.015
programmed cell deathGO:00125011190.015
single organism biosynthetic processGO:0044711710.015
carbohydrate derivative metabolic processGO:1901135610.015
regulation of wnt signaling pathwayGO:0030111530.015
lymphatic endothelial cell differentiationGO:006083610.015
small molecule metabolic processGO:0044281770.014
g1 s transition of mitotic cell cycleGO:000008210.014
establishment of localization in cellGO:0051649770.014
cytoskeleton dependent cytokinesisGO:006164030.014
positive regulation of gtpase activityGO:004354710.014
skin developmentGO:0043588540.014
hemopoiesisGO:00300971830.014
leukocyte proliferationGO:007066110.014
localization of cellGO:00516742440.014
Rat
ear developmentGO:00435831270.014
establishment or maintenance of apical basal cell polarityGO:0035088120.014
heterocycle metabolic processGO:00464832900.014
regulation of rna biosynthetic processGO:20011412130.014
modification of morphology or physiology of other organismGO:003582140.013
regulation of neuron differentiationGO:0045664560.013
Mouse Rat
cell projection organizationGO:00300302840.013
Zebrafish Mouse Rat
swimming behaviorGO:003626980.013
actin mediated cell contractionGO:007025210.013
nucleotide metabolic processGO:0009117280.013
organ regenerationGO:003110010.013
posterior lateral line system developmentGO:0048915460.013
sensory system developmentGO:0048880760.013
agingGO:000756820.013
Rat
macromolecule localizationGO:0033036540.013
digestionGO:0007586110.013
cell deathGO:00082191210.013
nucleobase containing small molecule metabolic processGO:0055086320.013
primitive erythrocyte differentiationGO:006031950.013
apoptotic processGO:00069151160.012
regulation of muscle hypertrophyGO:001474320.012
segmentationGO:0035282970.012
regulation of macromolecule biosynthetic processGO:00105562250.012
positive regulation of nucleotide metabolic processGO:004598190.012
regulation of gene expressionGO:00104682650.012
Mouse
regulation of nervous system developmentGO:0051960900.012
Mouse Rat
negative regulation of mesodermal cell fate specificationGO:004266230.012
positive regulation of cellular component biogenesisGO:004408930.012
membrane fusionGO:006102520.012
fatty acid transportGO:001590810.012
regulation of erk1 and erk2 cascadeGO:007037240.011
cellular amide metabolic processGO:004360340.011
organic substance transportGO:0071702580.011
sexual reproductionGO:0019953360.011
regulation of nucleoside metabolic processGO:000911820.011
guanosine containing compound catabolic processGO:190106920.011
cellular response to extracellular stimulusGO:003166820.011
symbiosis encompassing mutualism through parasitismGO:004440340.011
positive regulation of erk1 and erk2 cascadeGO:007037420.011
regulation of mrna catabolic processGO:006101330.011
regulation of gtpase activityGO:004308720.011
regulation of neurotransmitter transportGO:005158810.011
organism emergence from protective structureGO:007168440.011
negative regulation of blood vessel endothelial cell migrationGO:004353710.011
negative regulation of multi organism processGO:004390130.011
positive regulation of cellular component organizationGO:0051130130.011
blood vessel developmentGO:00015682460.011
axonogenesis involved in innervationGO:006038510.011
purine containing compound metabolic processGO:0072521290.010
germ cell migrationGO:000835480.010
inner ear receptor cell fate commitmentGO:006012040.010
regulation of gtp catabolic processGO:003312420.010
gastrulationGO:00073692080.010
fin morphogenesisGO:0033334530.010
mitotic cell cycleGO:0000278640.010
positive regulation of phosphate metabolic processGO:0045937210.010
neural crest formationGO:0014029140.010
gtp metabolic processGO:004603940.010
cellular response to radiationGO:007147840.010
female gonad developmentGO:000858540.010
chemotaxisGO:00069351040.010
cell cycle g2 m phase transitionGO:004483940.010
mesoderm developmentGO:0007498880.010

vim disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.042
bone remodeling diseaseDOID:008000500.042
bone diseaseDOID:008000100.042
musculoskeletal system diseaseDOID:1700.042
connective tissue diseaseDOID:6500.042
bone development diseaseDOID:008000600.032
nervous system diseaseDOID:86300.018
cerebral degenerationDOID:144300.014
brain diseaseDOID:93600.014
central nervous system diseaseDOID:33100.014