| larval development | GO:0002164 | 2 | 0.135 | |
| axon development | GO:0061564 | 166 | 0.084 | |
| skeletal system development | GO:0001501 | 181 | 0.065 | |
| cellular component morphogenesis | GO:0032989 | 336 | 0.057 | |
| phagocytosis | GO:0006909 | 3 | 0.054 | |
| positive regulation of biological process | GO:0048518 | 253 | 0.053 | |
| negative regulation of protein phosphorylation | GO:0001933 | 4 | 0.053 | |
| appendage morphogenesis | GO:0035107 | 56 | 0.051 | |
| cell part morphogenesis | GO:0032990 | 246 | 0.051 | |
| chordate embryonic development | GO:0043009 | 271 | 0.048 | |
| neuron development | GO:0048666 | 262 | 0.048 | |
| generation of neurons | GO:0048699 | 385 | 0.047 | |
| regulation of reproductive process | GO:2000241 | 4 | 0.044 | |
| organelle organization | GO:0006996 | 227 | 0.043 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 271 | 0.040 | |
| aging | GO:0007568 | 2 | 0.037 | |
| microtubule based process | GO:0007017 | 60 | 0.037 | |
| cell projection organization | GO:0030030 | 284 | 0.036 | |
| appendage development | GO:0048736 | 80 | 0.036 | |
| cell projection morphogenesis | GO:0048858 | 244 | 0.036 | |
| cellular lipid metabolic process | GO:0044255 | 36 | 0.036 | |
| protein import | GO:0017038 | 3 | 0.036 | |
| regulation of multicellular organism growth | GO:0040014 | 4 | 0.035 | |
| multicellular organism growth | GO:0035264 | 4 | 0.034 | |
| maintenance of location | GO:0051235 | 4 | 0.032 | |
| embryonic organ development | GO:0048568 | 381 | 0.031 | |
| carboxylic acid metabolic process | GO:0019752 | 22 | 0.031 | |
| regulation of signal transduction | GO:0009966 | 225 | 0.030 | |
| regulation of intracellular protein transport | GO:0033157 | 3 | 0.030 | |
| nucleocytoplasmic transport | GO:0006913 | 4 | 0.030 | |
| regulation of stem cell differentiation | GO:2000736 | 4 | 0.030 | |
| nuclear transport | GO:0051169 | 4 | 0.030 | |
| neuron differentiation | GO:0030182 | 353 | 0.029 | |
| heart development | GO:0007507 | 313 | 0.029 | |
| oxoacid metabolic process | GO:0043436 | 31 | 0.028 | |
| protein import into nucleus | GO:0006606 | 3 | 0.028 | |
| regulation of signaling | GO:0023051 | 235 | 0.028 | |
| cell motility | GO:0048870 | 244 | 0.027 | |
| regulation of localization | GO:0032879 | 104 | 0.027 | |
| cellular component disassembly | GO:0022411 | 1 | 0.027 | |
| cellular amine metabolic process | GO:0044106 | 2 | 0.027 | |
| cellular ketone metabolic process | GO:0042180 | 11 | 0.026 | |
| regulation of macromolecule metabolic process | GO:0060255 | 317 | 0.024 | |
| hemopoiesis | GO:0030097 | 183 | 0.024 | |
| signal transduction | GO:0007165 | 455 | 0.024 | |
| regulation of response to stimulus | GO:0048583 | 269 | 0.024 | |
| establishment of protein localization to organelle | GO:0072594 | 4 | 0.023 | |
| regulation of cellular amine metabolic process | GO:0033238 | 0 | 0.023 | |
| cell morphogenesis involved in differentiation | GO:0000904 | 195 | 0.023 | |
| central nervous system development | GO:0007417 | 387 | 0.023 | |
| organic acid metabolic process | GO:0006082 | 31 | 0.023 | |
| lipid storage | GO:0019915 | 1 | 0.023 | |
| cellular component movement | GO:0006928 | 335 | 0.023 | |
| regulation of stem cell proliferation | GO:0072091 | 2 | 0.023 | |
| locomotion | GO:0040011 | 313 | 0.023 | |
| regulation of cell activation | GO:0050865 | 1 | 0.023 | |
| response to uv | GO:0009411 | 3 | 0.022 | |
| nuclear import | GO:0051170 | 3 | 0.022 | |
| regulation of cytoplasmic transport | GO:1903649 | 4 | 0.022 | |
| ear development | GO:0043583 | 127 | 0.022 | |
| axonogenesis | GO:0007409 | 152 | 0.022 | |
| single organism metabolic process | GO:0044710 | 217 | 0.022 | |
| regulation of protein targeting | GO:1903533 | 2 | 0.022 | |
| intracellular receptor signaling pathway | GO:0030522 | 30 | 0.022 | |
| protein complex disassembly | GO:0043241 | 1 | 0.021 | |
| regulation of cytokine production | GO:0001817 | 3 | 0.021 | |
| regulation of cellular macromolecule biosynthetic process | GO:2000112 | 222 | 0.021 | |
| organic substance biosynthetic process | GO:1901576 | 289 | 0.021 | |
| tissue remodeling | GO:0048771 | 4 | 0.021 | |
| negative regulation of kinase activity | GO:0033673 | 4 | 0.021 | |
| positive regulation of stress activated mapk cascade | GO:0032874 | 3 | 0.020 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 7 | 0.020 | |
| positive regulation of map kinase activity | GO:0043406 | 3 | 0.020 | |
| camera type eye development | GO:0043010 | 222 | 0.020 | |
| regulation of developmental process | GO:0050793 | 247 | 0.020 | |
| neuron projection development | GO:0031175 | 180 | 0.020 | |
| cell morphogenesis | GO:0000902 | 289 | 0.020 | |
| cellular protein catabolic process | GO:0044257 | 4 | 0.020 | |
| regulation of protein import into nucleus | GO:0042306 | 2 | 0.020 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 2 | 0.020 | |
| small molecule metabolic process | GO:0044281 | 77 | 0.019 | |
| response to external stimulus | GO:0009605 | 264 | 0.019 | |
| regulation of protein transport | GO:0051223 | 3 | 0.019 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 0 | 0.019 | |
| cellular amino acid metabolic process | GO:0006520 | 7 | 0.019 | |
| cellular carbohydrate metabolic process | GO:0044262 | 4 | 0.019 | |
| regulation of multicellular organismal process | GO:0051239 | 277 | 0.019 | |
| regulation of biological quality | GO:0065008 | 263 | 0.019 | |
| vasculature development | GO:0001944 | 278 | 0.019 | |
| sensory organ development | GO:0007423 | 393 | 0.018 | |
| fin development | GO:0033333 | 77 | 0.018 | |
| retinoic acid receptor signaling pathway | GO:0048384 | 16 | 0.018 | |
| positive regulation of transport | GO:0051050 | 2 | 0.018 | |
| homeostasis of number of cells | GO:0048872 | 62 | 0.018 | |
| positive regulation of reproductive process | GO:2000243 | 2 | 0.018 | |
| regulation of cell communication | GO:0010646 | 232 | 0.018 | |
| embryonic limb morphogenesis | GO:0030326 | 2 | 0.018 | |
| negative regulation of small gtpase mediated signal transduction | GO:0051058 | 1 | 0.018 | |
| nitrogen compound metabolic process | GO:0006807 | 319 | 0.018 | |
| regulation of protein complex assembly | GO:0043254 | 3 | 0.018 | |
| macromolecule modification | GO:0043412 | 111 | 0.018 | |
| single organism organelle organization | GO:1902589 | 199 | 0.018 | |
| positive regulation of catabolic process | GO:0009896 | 4 | 0.018 | |
| myeloid cell differentiation | GO:0030099 | 86 | 0.017 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.017 | |
| regulation of protein polymerization | GO:0032271 | 2 | 0.017 | |
| immune system process | GO:0002376 | 241 | 0.017 | |
| positive regulation of cell cycle | GO:0045787 | 3 | 0.017 | |
| eye development | GO:0001654 | 277 | 0.017 | |
| striated muscle cell differentiation | GO:0051146 | 129 | 0.017 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 76 | 0.017 | |
| establishment of localization | GO:0051234 | 244 | 0.016 | |
| digestive system development | GO:0055123 | 289 | 0.016 | |
| embryonic skeletal system morphogenesis | GO:0048704 | 93 | 0.016 | |
| connective tissue development | GO:0061448 | 99 | 0.016 | |
| negative regulation of cellular process | GO:0048523 | 283 | 0.016 | |
| gastrulation | GO:0007369 | 208 | 0.016 | |
| stem cell division | GO:0017145 | 1 | 0.016 | |
| brain development | GO:0007420 | 293 | 0.016 | |
| regulation of microtubule cytoskeleton organization | GO:0070507 | 3 | 0.016 | |
| skeletal system morphogenesis | GO:0048705 | 102 | 0.016 | |
| multi organism cellular process | GO:0044764 | 2 | 0.016 | |
| regulation of protein localization to nucleus | GO:1900180 | 2 | 0.016 | |
| cellular macromolecule metabolic process | GO:0044260 | 391 | 0.016 | |
| stem cell proliferation | GO:0072089 | 4 | 0.016 | |
| single organism transport | GO:0044765 | 206 | 0.015 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 0 | 0.015 | |
| single organism localization | GO:1902578 | 225 | 0.015 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 3 | 0.015 | |
| sensory organ morphogenesis | GO:0090596 | 200 | 0.015 | |
| erythrocyte homeostasis | GO:0034101 | 55 | 0.015 | |
| bone remodeling | GO:0046849 | 2 | 0.015 | |
| immune system development | GO:0002520 | 191 | 0.015 | |
| cell migration | GO:0016477 | 237 | 0.015 | |
| regulation of establishment of protein localization | GO:0070201 | 4 | 0.014 | |
| response to stress | GO:0006950 | 263 | 0.014 | |
| positive regulation of cellular catabolic process | GO:0031331 | 3 | 0.014 | |
| regulation of protein catabolic process | GO:0042176 | 1 | 0.014 | |
| organic cyclic compound metabolic process | GO:1901360 | 301 | 0.014 | |
| notochord development | GO:0030903 | 54 | 0.014 | |
| regulation of p38mapk cascade | GO:1900744 | 1 | 0.014 | |
| microtubule polymerization or depolymerization | GO:0031109 | 3 | 0.014 | |
| compound eye development | GO:0048749 | 2 | 0.014 | |
| localization of cell | GO:0051674 | 244 | 0.014 | |
| multicellular organismal response to stress | GO:0033555 | 2 | 0.014 | |
| renal tubule morphogenesis | GO:0061333 | 1 | 0.014 | |
| gtp metabolic process | GO:0046039 | 4 | 0.014 | |
| developmental growth | GO:0048589 | 166 | 0.013 | |
| microtubule depolymerization | GO:0007019 | 1 | 0.013 | |
| negative regulation of protein kinase activity | GO:0006469 | 4 | 0.013 | |
| negative regulation of protein complex assembly | GO:0031333 | 1 | 0.013 | |
| embryonic skeletal system development | GO:0048706 | 97 | 0.013 | |
| protein acetylation | GO:0006473 | 2 | 0.013 | |
| positive regulation of stem cell proliferation | GO:2000648 | 1 | 0.013 | |
| regulation of skeletal muscle tissue development | GO:0048641 | 4 | 0.013 | |
| regulation of binding | GO:0051098 | 3 | 0.013 | |
| regulation of metal ion transport | GO:0010959 | 4 | 0.013 | |
| positive regulation of multi organism process | GO:0043902 | 3 | 0.013 | |
| regulation of primary metabolic process | GO:0080090 | 311 | 0.013 | |
| amine metabolic process | GO:0009308 | 2 | 0.013 | |
| response to chemical | GO:0042221 | 320 | 0.013 | |
| single organism nuclear import | GO:1902593 | 3 | 0.013 | |
| embryonic organ morphogenesis | GO:0048562 | 274 | 0.013 | |
| phagocytosis engulfment | GO:0006911 | 1 | 0.013 | |
| cellular response to endogenous stimulus | GO:0071495 | 68 | 0.013 | |
| negative regulation of biological process | GO:0048519 | 304 | 0.012 | |
| protein polymerization | GO:0051258 | 4 | 0.012 | |
| negative regulation of signal transduction | GO:0009968 | 94 | 0.012 | |
| stem cell maintenance | GO:0019827 | 4 | 0.012 | |
| protein complex biogenesis | GO:0070271 | 30 | 0.012 | |
| neurotransmitter transport | GO:0006836 | 2 | 0.012 | |
| regulation of metabolic process | GO:0019222 | 359 | 0.012 | |
| peptidyl lysine acetylation | GO:0018394 | 2 | 0.012 | |
| embryonic cranial skeleton morphogenesis | GO:0048701 | 90 | 0.012 | |
| single organism biosynthetic process | GO:0044711 | 71 | 0.012 | |
| protein targeting to nucleus | GO:0044744 | 3 | 0.012 | |
| proximal distal pattern formation | GO:0009954 | 1 | 0.012 | |
| regulation of protein modification by small protein conjugation or removal | GO:1903320 | 3 | 0.012 | |
| head development | GO:0060322 | 303 | 0.012 | |
| embryonic skeletal joint morphogenesis | GO:0060272 | 3 | 0.012 | |
| biosynthetic process | GO:0009058 | 294 | 0.012 | |
| lateral line system development | GO:0048925 | 76 | 0.012 | |
| negative regulation of metabolic process | GO:0009892 | 86 | 0.012 | |
| cell cycle | GO:0007049 | 93 | 0.012 | |
| angiogenesis | GO:0001525 | 158 | 0.012 | |
| regulation of cellular metabolic process | GO:0031323 | 320 | 0.012 | |
| proteasomal protein catabolic process | GO:0010498 | 2 | 0.012 | |
| protein localization to nucleus | GO:0034504 | 3 | 0.012 | |
| endothelial cell fate commitment | GO:0060839 | 3 | 0.012 | |
| activation of mapk activity | GO:0000187 | 3 | 0.011 | |
| positive regulation of cytokine production | GO:0001819 | 2 | 0.011 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 191 | 0.011 | |
| intracellular signal transduction | GO:0035556 | 85 | 0.011 | |
| muscle structure development | GO:0061061 | 196 | 0.011 | |
| oxidation reduction process | GO:0055114 | 41 | 0.011 | |
| internal protein amino acid acetylation | GO:0006475 | 2 | 0.011 | |
| regulation of gene expression | GO:0010468 | 265 | 0.011 | |
| phosphate containing compound metabolic process | GO:0006796 | 108 | 0.011 | |
| cell death | GO:0008219 | 121 | 0.011 | |
| transmembrane transport | GO:0055085 | 120 | 0.011 | |
| morphogenesis of an epithelium | GO:0002009 | 333 | 0.011 | |
| nephron morphogenesis | GO:0072028 | 2 | 0.011 | |
| tube morphogenesis | GO:0035239 | 349 | 0.011 | |
| membrane invagination | GO:0010324 | 1 | 0.011 | |
| negative regulation of mapk cascade | GO:0043409 | 4 | 0.011 | |
| heterocycle metabolic process | GO:0046483 | 290 | 0.011 | |
| multi organism process | GO:0051704 | 134 | 0.011 | |
| positive regulation of signaling | GO:0023056 | 56 | 0.011 | |
| transport | GO:0006810 | 220 | 0.011 | |
| regulation of tissue remodeling | GO:0034103 | 2 | 0.011 | |
| cellular aromatic compound metabolic process | GO:0006725 | 295 | 0.011 | |
| regulation of peptidyl tyrosine phosphorylation | GO:0050730 | 1 | 0.011 | |
| positive regulation of jnk cascade | GO:0046330 | 3 | 0.011 | |
| regulation of neurotransmitter transport | GO:0051588 | 1 | 0.011 | |
| neurotransmitter secretion | GO:0007269 | 2 | 0.010 | |
| cellular response to oxygen levels | GO:0071453 | 1 | 0.010 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 106 | 0.010 | |
| protein metabolic process | GO:0019538 | 183 | 0.010 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 3 | 0.010 | |
| eye morphogenesis | GO:0048592 | 144 | 0.010 | |
| cellular nitrogen compound metabolic process | GO:0034641 | 290 | 0.010 | |
| modification dependent protein catabolic process | GO:0019941 | 3 | 0.010 | |
| regulation of myotube differentiation | GO:0010830 | 2 | 0.010 | |
| negative regulation of stem cell differentiation | GO:2000737 | 2 | 0.010 | |
| kidney development | GO:0001822 | 92 | 0.010 | |
| negative regulation of protein serine threonine kinase activity | GO:0071901 | 2 | 0.010 | |
| regulation of blood vessel size | GO:0050880 | 2 | 0.010 | |
| rna transport | GO:0050658 | 2 | 0.010 | |
