| heterocycle biosynthetic process | GO:0018130 | 215 | 0.393 | Rat |
| gene expression | GO:0010467 | 252 | 0.369 | Rat |
| cellular aromatic compound metabolic process | GO:0006725 | 295 | 0.349 | Rat |
| regulation of macromolecule metabolic process | GO:0060255 | 317 | 0.211 | Rat |
| embryo development ending in birth or egg hatching | GO:0009792 | 271 | 0.176 | |
| rna metabolic process | GO:0016070 | 219 | 0.161 | Rat |
| nucleic acid metabolic process | GO:0090304 | 244 | 0.155 | Rat |
| nucleobase containing compound metabolic process | GO:0006139 | 274 | 0.153 | Rat |
| nucleobase containing compound biosynthetic process | GO:0034654 | 205 | 0.148 | Rat |
| cellular nitrogen compound metabolic process | GO:0034641 | 290 | 0.133 | Rat |
| cellular macromolecule metabolic process | GO:0044260 | 391 | 0.129 | Rat |
| regulation of nitrogen compound metabolic process | GO:0051171 | 251 | 0.121 | Rat |
| larval development | GO:0002164 | 2 | 0.102 | |
| regulation of cellular metabolic process | GO:0031323 | 320 | 0.097 | Rat |
| generation of neurons | GO:0048699 | 385 | 0.093 | |
| regulation of rna metabolic process | GO:0051252 | 224 | 0.093 | Rat |
| aromatic compound biosynthetic process | GO:0019438 | 217 | 0.090 | Rat |
| cellular macromolecule biosynthetic process | GO:0034645 | 224 | 0.086 | Rat |
| specification of symmetry | GO:0009799 | 204 | 0.082 | |
| nitrogen compound metabolic process | GO:0006807 | 319 | 0.082 | Rat |
| central nervous system development | GO:0007417 | 387 | 0.081 | |
| organic cyclic compound biosynthetic process | GO:1901362 | 223 | 0.076 | Rat |
| anterior posterior pattern specification | GO:0009952 | 152 | 0.076 | |
| neural retina development | GO:0003407 | 49 | 0.074 | |
| regulation of gene expression | GO:0010468 | 265 | 0.070 | Rat |
| regulation of cellular macromolecule biosynthetic process | GO:2000112 | 222 | 0.069 | Rat |
| immune system process | GO:0002376 | 241 | 0.069 | |
| biosynthetic process | GO:0009058 | 294 | 0.067 | Rat |
| epidermis development | GO:0008544 | 48 | 0.066 | |
| organic cyclic compound metabolic process | GO:1901360 | 301 | 0.065 | Rat |
| negative regulation of histone modification | GO:0031057 | 1 | 0.064 | |
| embryonic organ development | GO:0048568 | 381 | 0.064 | |
| cellular biosynthetic process | GO:0044249 | 286 | 0.063 | Rat |
| cellular nitrogen compound biosynthetic process | GO:0044271 | 218 | 0.062 | Rat |
| head development | GO:0060322 | 303 | 0.060 | |
| multi organism process | GO:0051704 | 134 | 0.058 | |
| retina development in camera type eye | GO:0060041 | 146 | 0.058 | |
| regulation of transcription dna templated | GO:0006355 | 213 | 0.058 | Rat |
| locomotion | GO:0040011 | 313 | 0.058 | |
| positive regulation of biological process | GO:0048518 | 253 | 0.056 | |
| determination of bilateral symmetry | GO:0009855 | 204 | 0.055 | |
| muscle structure development | GO:0061061 | 196 | 0.055 | |
| neuron differentiation | GO:0030182 | 353 | 0.052 | |
| stem cell proliferation | GO:0072089 | 4 | 0.050 | |
| sensory organ morphogenesis | GO:0090596 | 200 | 0.049 | |
| mitotic cell cycle embryonic | GO:0045448 | 2 | 0.049 | |
| oocyte anterior posterior axis specification | GO:0007314 | 4 | 0.048 | |
| signal transduction | GO:0007165 | 455 | 0.046 | |
| heterocycle metabolic process | GO:0046483 | 290 | 0.045 | Rat |
| photoreceptor cell development | GO:0042461 | 40 | 0.044 | |
| macromolecule biosynthetic process | GO:0009059 | 227 | 0.041 | Rat |
| nucleic acid templated transcription | GO:0097659 | 181 | 0.040 | Rat |
| retina layer formation | GO:0010842 | 24 | 0.040 | |
| regionalization | GO:0003002 | 274 | 0.040 | |
| skin development | GO:0043588 | 54 | 0.039 | |
| regulation of nucleobase containing compound metabolic process | GO:0019219 | 250 | 0.039 | Rat |
| male meiosis | GO:0007140 | 2 | 0.038 | |
| camera type eye photoreceptor cell differentiation | GO:0060219 | 19 | 0.038 | |
| cell part morphogenesis | GO:0032990 | 246 | 0.037 | |
| vasculature development | GO:0001944 | 278 | 0.037 | |
| regulation of signal transduction | GO:0009966 | 225 | 0.036 | |
| regulation of metabolic process | GO:0019222 | 359 | 0.036 | Rat |
| forebrain regionalization | GO:0021871 | 4 | 0.036 | |
| eye photoreceptor cell development | GO:0042462 | 30 | 0.035 | |
| camera type eye development | GO:0043010 | 222 | 0.035 | |
| spermatid development | GO:0007286 | 2 | 0.034 | |
| heart development | GO:0007507 | 313 | 0.034 | |
| stem cell maintenance | GO:0019827 | 4 | 0.034 | |
| positive regulation of cell cycle | GO:0045787 | 3 | 0.033 | |
| dorsal ventral pattern formation | GO:0009953 | 125 | 0.032 | |
| oocyte maturation | GO:0001556 | 4 | 0.031 | |
| photoreceptor cell differentiation | GO:0046530 | 55 | 0.031 | |
| regulation of response to stimulus | GO:0048583 | 269 | 0.030 | |
| aging | GO:0007568 | 2 | 0.030 | |
| meiotic nuclear division | GO:0007126 | 4 | 0.030 | |
| regulation of cellular biosynthetic process | GO:0031326 | 245 | 0.030 | Rat |
| positive regulation of gene expression | GO:0010628 | 71 | 0.030 | |
| cellular protein metabolic process | GO:0044267 | 129 | 0.029 | |
| cell migration involved in gastrulation | GO:0042074 | 79 | 0.029 | |
| camera type eye morphogenesis | GO:0048593 | 108 | 0.029 | |
| embryonic organ morphogenesis | GO:0048562 | 274 | 0.029 | |
| morphogenesis of an epithelium | GO:0002009 | 333 | 0.029 | |
| cell substrate adhesion | GO:0031589 | 4 | 0.029 | |
| mesenchymal cell differentiation | GO:0048762 | 87 | 0.029 | |
| eye development | GO:0001654 | 277 | 0.028 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 3 | 0.028 | |
| retina morphogenesis in camera type eye | GO:0060042 | 79 | 0.028 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 80 | 0.028 | |
| maternal determination of anterior posterior axis embryo | GO:0008358 | 4 | 0.028 | |
| transcription dna templated | GO:0006351 | 181 | 0.028 | Rat |
| organelle organization | GO:0006996 | 227 | 0.027 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 3 | 0.027 | |
| negative regulation of biological process | GO:0048519 | 304 | 0.027 | Rat |
| convergent extension involved in gastrulation | GO:0060027 | 71 | 0.026 | |
| determination of left right symmetry | GO:0007368 | 179 | 0.026 | |
| positive regulation of catabolic process | GO:0009896 | 4 | 0.026 | |
| regulation of microtubule cytoskeleton organization | GO:0070507 | 3 | 0.025 | |
| embryonic hemopoiesis | GO:0035162 | 53 | 0.025 | |
| negative regulation of cellular process | GO:0048523 | 283 | 0.025 | Rat |
| brain development | GO:0007420 | 293 | 0.025 | |
| hemopoiesis | GO:0030097 | 183 | 0.025 | |
| regulation of biosynthetic process | GO:0009889 | 250 | 0.025 | Rat |
| chordate embryonic development | GO:0043009 | 271 | 0.025 | |
| digestive tract development | GO:0048565 | 265 | 0.025 | |
| post embryonic organ development | GO:0048569 | 4 | 0.025 | |
| negative regulation of metabolic process | GO:0009892 | 86 | 0.024 | Rat |
| negative regulation of transcription dna templated | GO:0045892 | 45 | 0.024 | Rat |
| negative regulation of chromosome organization | GO:2001251 | 1 | 0.024 | |
| developmental growth | GO:0048589 | 166 | 0.024 | |
| neuroblast proliferation | GO:0007405 | 2 | 0.024 | |
| heart morphogenesis | GO:0003007 | 156 | 0.023 | |
| blood vessel morphogenesis | GO:0048514 | 216 | 0.023 | |
| embryonic heart tube morphogenesis | GO:0003143 | 108 | 0.023 | |
| sensory organ development | GO:0007423 | 393 | 0.023 | |
| regulation of reproductive process | GO:2000241 | 4 | 0.023 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 76 | 0.023 | Rat |
| ameboidal type cell migration | GO:0001667 | 143 | 0.022 | |
| modification dependent protein catabolic process | GO:0019941 | 3 | 0.022 | |
| convergent extension | GO:0060026 | 118 | 0.022 | |
| regulation of nervous system development | GO:0051960 | 90 | 0.022 | |
| regulation of nucleic acid templated transcription | GO:1903506 | 213 | 0.022 | Rat |
| blood vessel development | GO:0001568 | 246 | 0.022 | |
| organic substance biosynthetic process | GO:1901576 | 289 | 0.022 | Rat |
| growth | GO:0040007 | 174 | 0.022 | |
| positive regulation of cellular process | GO:0048522 | 201 | 0.022 | |
| negative regulation of cellular metabolic process | GO:0031324 | 77 | 0.022 | Rat |
| rna biosynthetic process | GO:0032774 | 181 | 0.021 | Rat |
| gastrulation | GO:0007369 | 208 | 0.021 | |
| apoptotic process | GO:0006915 | 116 | 0.021 | |
| maintenance of location | GO:0051235 | 4 | 0.021 | |
| circulatory system process | GO:0003013 | 87 | 0.021 | |
| protein metabolic process | GO:0019538 | 183 | 0.021 | |
| phagocytosis | GO:0006909 | 3 | 0.021 | |
| digestive system development | GO:0055123 | 289 | 0.021 | |
| ear morphogenesis | GO:0042471 | 64 | 0.021 | |
| regulation of primary metabolic process | GO:0080090 | 311 | 0.021 | Rat |
| regulation of dendrite development | GO:0050773 | 3 | 0.021 | |
| eye photoreceptor cell differentiation | GO:0001754 | 45 | 0.020 | |
| embryonic heart tube development | GO:0035050 | 133 | 0.020 | |
| negative regulation of protein complex assembly | GO:0031333 | 1 | 0.020 | |
| regulation of signaling | GO:0023051 | 235 | 0.020 | |
| regulation of macromolecule biosynthetic process | GO:0010556 | 225 | 0.020 | Rat |
| cell morphogenesis involved in neuron differentiation | GO:0048667 | 163 | 0.020 | |
| gtp catabolic process | GO:0006184 | 2 | 0.019 | |
| lipid storage | GO:0019915 | 1 | 0.019 | |
| chromosome organization | GO:0051276 | 31 | 0.019 | |
| sex determination | GO:0007530 | 1 | 0.019 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 59 | 0.019 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 59 | 0.019 | Rat |
| hematopoietic or lymphoid organ development | GO:0048534 | 191 | 0.019 | |
| cellular component biogenesis | GO:0044085 | 178 | 0.018 | |
| vasculogenesis | GO:0001570 | 41 | 0.018 | |
| neural crest cell development | GO:0014032 | 62 | 0.018 | |
| negative regulation of chromatin modification | GO:1903309 | 1 | 0.018 | |
| regulation of purine nucleotide catabolic process | GO:0033121 | 2 | 0.018 | |
| regulation of biological quality | GO:0065008 | 263 | 0.018 | |
| blood circulation | GO:0008015 | 87 | 0.018 | |
| response to chemical | GO:0042221 | 320 | 0.018 | |
| regulation of multicellular organism growth | GO:0040014 | 4 | 0.018 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 69 | 0.018 | |
| organelle localization | GO:0051640 | 49 | 0.017 | |
| spermatid differentiation | GO:0048515 | 2 | 0.017 | |
| negative regulation of ras protein signal transduction | GO:0046580 | 1 | 0.017 | |
| segmentation | GO:0035282 | 97 | 0.017 | |
| epithelial cell differentiation | GO:0030855 | 116 | 0.017 | |
| somatic muscle development | GO:0007525 | 4 | 0.017 | |
| neural precursor cell proliferation | GO:0061351 | 20 | 0.016 | |
| eye morphogenesis | GO:0048592 | 144 | 0.016 | |
| epithelial tube morphogenesis | GO:0060562 | 148 | 0.016 | |
| primitive hemopoiesis | GO:0060215 | 27 | 0.016 | |
| negative regulation of rna metabolic process | GO:0051253 | 48 | 0.016 | Rat |
| primary neural tube formation | GO:0014020 | 1 | 0.016 | |
| cell death | GO:0008219 | 121 | 0.016 | |
| regulation of stem cell differentiation | GO:2000736 | 4 | 0.015 | |
| septum transversum development | GO:0003343 | 4 | 0.015 | |
| somitogenesis | GO:0001756 | 87 | 0.015 | |
| regulation of protein complex assembly | GO:0043254 | 3 | 0.015 | |
| dna biosynthetic process | GO:0071897 | 3 | 0.015 | |
| negative regulation of small gtpase mediated signal transduction | GO:0051058 | 1 | 0.015 | |
| digestive tract morphogenesis | GO:0048546 | 231 | 0.015 | |
| establishment of localization | GO:0051234 | 244 | 0.015 | |
| regulation of nucleotide catabolic process | GO:0030811 | 2 | 0.015 | |
| gtp metabolic process | GO:0046039 | 4 | 0.015 | |
| regulation of nucleoside metabolic process | GO:0009118 | 2 | 0.015 | |
| positive regulation of cellular metabolic process | GO:0031325 | 94 | 0.015 | |
| regulation of synapse assembly | GO:0051963 | 3 | 0.015 | |
| heart looping | GO:0001947 | 94 | 0.015 | |
| rna localization | GO:0006403 | 4 | 0.014 | |
| single organism reproductive process | GO:0044702 | 40 | 0.014 | |
| regulation of synapse organization | GO:0050807 | 3 | 0.014 | |
| cell proliferation | GO:0008283 | 80 | 0.014 | |
| multi organism reproductive process | GO:0044703 | 36 | 0.014 | |
| protein modification process | GO:0036211 | 100 | 0.014 | |
| negative regulation of response to stimulus | GO:0048585 | 104 | 0.014 | |
| regulation of cell development | GO:0060284 | 100 | 0.014 | |
| regulation of neurogenesis | GO:0050767 | 87 | 0.014 | |
| positive regulation of neural precursor cell proliferation | GO:2000179 | 1 | 0.014 | |
| programmed cell death | GO:0012501 | 119 | 0.014 | |
| ras protein signal transduction | GO:0007265 | 7 | 0.014 | |
| transport | GO:0006810 | 220 | 0.014 | |
| system process | GO:0003008 | 185 | 0.014 | |
| retinal rod cell development | GO:0046548 | 4 | 0.014 | |
| neuron projection development | GO:0031175 | 180 | 0.013 | |
| positive regulation of nucleotide catabolic process | GO:0030813 | 1 | 0.013 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 59 | 0.013 | Rat |
| fertilization | GO:0009566 | 3 | 0.013 | |
| regulation of rna biosynthetic process | GO:2001141 | 213 | 0.013 | Rat |
| regulation of cell communication | GO:0010646 | 232 | 0.013 | |
| regulation of developmental process | GO:0050793 | 247 | 0.013 | |
| regulation of gtpase activity | GO:0043087 | 2 | 0.013 | |
| somite development | GO:0061053 | 96 | 0.013 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 69 | 0.013 | |
| cell fate commitment | GO:0045165 | 99 | 0.013 | |
| covalent chromatin modification | GO:0016569 | 20 | 0.013 | |
| cell surface receptor signaling pathway | GO:0007166 | 325 | 0.013 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 3 | 0.013 | |
| single organism organelle organization | GO:1902589 | 199 | 0.013 | |
| cellular component assembly | GO:0022607 | 170 | 0.013 | |
| regulation of blood circulation | GO:1903522 | 32 | 0.013 | |
| adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains | GO:0002460 | 4 | 0.013 | |
| cell cycle process | GO:0022402 | 53 | 0.013 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 93 | 0.013 | |
| regulation of multicellular organismal process | GO:0051239 | 277 | 0.013 | |
| positive regulation of metabolic process | GO:0009893 | 108 | 0.012 | |
| nerve development | GO:0021675 | 45 | 0.012 | |
| neuron development | GO:0048666 | 262 | 0.012 | |
| peptidyl serine modification | GO:0018209 | 2 | 0.012 | |
| response to wounding | GO:0009611 | 116 | 0.012 | |
| response to external stimulus | GO:0009605 | 264 | 0.012 | |
| photoreceptor cell fate commitment | GO:0046552 | 1 | 0.012 | |
| retinal cone cell differentiation | GO:0042670 | 12 | 0.012 | |
| myeloid cell differentiation | GO:0030099 | 86 | 0.012 | |
| cell projection morphogenesis | GO:0048858 | 244 | 0.012 | |
| cellular ketone metabolic process | GO:0042180 | 11 | 0.012 | |
| regulation of meiotic cell cycle | GO:0051445 | 1 | 0.012 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 3 | 0.012 | |
| cell proliferation in forebrain | GO:0021846 | 3 | 0.012 | |
| energy reserve metabolic process | GO:0006112 | 2 | 0.012 | |
| neural tube patterning | GO:0021532 | 33 | 0.012 | |
| regulation of gtp catabolic process | GO:0033124 | 2 | 0.012 | |
| secondary metabolic process | GO:0019748 | 3 | 0.012 | |
| morphogenesis of an epithelial fold | GO:0060571 | 1 | 0.011 | |
| fin development | GO:0033333 | 77 | 0.011 | |
| double strand break repair | GO:0006302 | 3 | 0.011 | |
| guanosine containing compound metabolic process | GO:1901068 | 4 | 0.011 | |
| establishment of organelle localization | GO:0051656 | 45 | 0.011 | |
| centrosome organization | GO:0051297 | 1 | 0.011 | |
| small gtpase mediated signal transduction | GO:0007264 | 8 | 0.011 | |
| cell projection organization | GO:0030030 | 284 | 0.011 | |
| retinal cone cell development | GO:0046549 | 8 | 0.011 | |
| localization of cell | GO:0051674 | 244 | 0.011 | |
| adult behavior | GO:0030534 | 2 | 0.011 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 3 | 0.011 | |
| developmental growth involved in morphogenesis | GO:0060560 | 86 | 0.011 | |
| fin morphogenesis | GO:0033334 | 53 | 0.011 | |
| dna metabolic process | GO:0006259 | 27 | 0.011 | |
| membrane invagination | GO:0010324 | 1 | 0.011 | |
| female meiotic division | GO:0007143 | 2 | 0.011 | |
| positive regulation of jun kinase activity | GO:0043507 | 2 | 0.011 | |
| positive regulation of gtpase activity | GO:0043547 | 1 | 0.011 | |
| positive regulation of cellular catabolic process | GO:0031331 | 3 | 0.011 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 0 | 0.011 | |
| response to alkaloid | GO:0043279 | 2 | 0.011 | |
| production of molecular mediator of immune response | GO:0002440 | 2 | 0.011 | |
| positive regulation of nucleoside metabolic process | GO:0045979 | 1 | 0.011 | |
| negative regulation of nuclear division | GO:0051784 | 3 | 0.011 | |
| mesenchymal cell development | GO:0014031 | 78 | 0.011 | |
| heart contraction | GO:0060047 | 71 | 0.011 | |
| regulation of establishment of protein localization to plasma membrane | GO:0090003 | 1 | 0.010 | |
| cellular protein modification process | GO:0006464 | 100 | 0.010 | |
| forebrain neuron fate commitment | GO:0021877 | 1 | 0.010 | |
| tube morphogenesis | GO:0035239 | 349 | 0.010 | |
| myeloid cell development | GO:0061515 | 32 | 0.010 | |
| macromolecule modification | GO:0043412 | 111 | 0.010 | |
| positive regulation of transport | GO:0051050 | 2 | 0.010 | |
| tissue remodeling | GO:0048771 | 4 | 0.010 | |
