| larval development | GO:0002164 | 2 | 0.972 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 271 | 0.781 | |
| microtubule based process | GO:0007017 | 60 | 0.548 | Fly |
| aging | GO:0007568 | 2 | 0.517 | |
| maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna | GO:0000462 | 1 | 0.468 | Yeast |
| centrosome cycle | GO:0007098 | 1 | 0.363 | |
| reproduction | GO:0000003 | 40 | 0.347 | |
| centrosome duplication | GO:0051298 | 1 | 0.340 | |
| microtubule organizing center organization | GO:0031023 | 1 | 0.326 | |
| organelle organization | GO:0006996 | 227 | 0.309 | Yeast Fly |
| cytoskeleton organization | GO:0007010 | 96 | 0.309 | Fly |
| cell cycle | GO:0007049 | 93 | 0.295 | Fly |
| establishment of localization | GO:0051234 | 244 | 0.225 | |
| meiotic cell cycle process | GO:1903046 | 3 | 0.222 | |
| microtubule cytoskeleton organization | GO:0000226 | 33 | 0.182 | Fly |
| protein complex subunit organization | GO:0071822 | 46 | 0.181 | Fly |
| centrosome organization | GO:0051297 | 1 | 0.173 | |
| mitotic spindle organization | GO:0007052 | 5 | 0.163 | Fly |
| transport | GO:0006810 | 220 | 0.162 | |
| single organism organelle organization | GO:1902589 | 199 | 0.146 | Fly |
| apoptotic process | GO:0006915 | 116 | 0.142 | |
| positive regulation of cell cycle | GO:0045787 | 3 | 0.141 | |
| mitotic cell cycle | GO:0000278 | 64 | 0.138 | Fly |
| nuclear transport | GO:0051169 | 4 | 0.128 | |
| cellular macromolecule metabolic process | GO:0044260 | 391 | 0.126 | Yeast |
| nucleocytoplasmic transport | GO:0006913 | 4 | 0.120 | |
| cell death | GO:0008219 | 121 | 0.116 | |
| ribosomal small subunit biogenesis | GO:0042274 | 2 | 0.112 | Yeast |
| organelle assembly | GO:0070925 | 110 | 0.111 | Yeast |
| cellular component biogenesis | GO:0044085 | 178 | 0.100 | Yeast |
| maintenance of location | GO:0051235 | 4 | 0.100 | |
| maturation of ssu rrna | GO:0030490 | 1 | 0.099 | Yeast |
| protein metabolic process | GO:0019538 | 183 | 0.098 | |
| locomotion | GO:0040011 | 313 | 0.094 | |
| cellular nitrogen compound metabolic process | GO:0034641 | 290 | 0.092 | Yeast |
| rna transport | GO:0050658 | 2 | 0.089 | |
| nitrogen compound metabolic process | GO:0006807 | 319 | 0.085 | Yeast |
| establishment of protein localization to organelle | GO:0072594 | 4 | 0.085 | |
| mitotic cell cycle process | GO:1903047 | 48 | 0.084 | Fly |
| heterocycle metabolic process | GO:0046483 | 290 | 0.082 | Yeast |
| cellular biosynthetic process | GO:0044249 | 286 | 0.081 | |
| programmed cell death | GO:0012501 | 119 | 0.078 | |
| death | GO:0016265 | 121 | 0.077 | |
| oocyte anterior posterior axis specification | GO:0007314 | 4 | 0.074 | |
| biosynthetic process | GO:0009058 | 294 | 0.072 | |
| nucleic acid metabolic process | GO:0090304 | 244 | 0.071 | Yeast |
| nucleic acid transport | GO:0050657 | 2 | 0.071 | |
| single organism transport | GO:0044765 | 206 | 0.071 | |
| single organism localization | GO:1902578 | 225 | 0.069 | |
| nucleobase containing compound metabolic process | GO:0006139 | 274 | 0.069 | Yeast |
| post embryonic development | GO:0009791 | 7 | 0.069 | |
| establishment of localization in cell | GO:0051649 | 77 | 0.068 | |
| chordate embryonic development | GO:0043009 | 271 | 0.067 | |
| rna localization | GO:0006403 | 4 | 0.064 | |
| macromolecular complex subunit organization | GO:0043933 | 74 | 0.063 | Yeast Fly |
| hematopoietic or lymphoid organ development | GO:0048534 | 191 | 0.063 | |
| meiotic nuclear division | GO:0007126 | 4 | 0.062 | |
| lipid storage | GO:0019915 | 1 | 0.061 | |
| cellular protein metabolic process | GO:0044267 | 129 | 0.060 | |
| organic substance biosynthetic process | GO:1901576 | 289 | 0.058 | |
| immune system development | GO:0002520 | 191 | 0.056 | |
| spindle organization | GO:0007051 | 5 | 0.053 | Fly |
| pole plasm assembly | GO:0007315 | 4 | 0.053 | |
| rna export from nucleus | GO:0006405 | 1 | 0.051 | |
| regulation of cell death | GO:0010941 | 103 | 0.049 | |
| localization of cell | GO:0051674 | 244 | 0.048 | |
| response to stress | GO:0006950 | 263 | 0.048 | |
| ribosome biogenesis | GO:0042254 | 9 | 0.048 | Yeast |
| macromolecule biosynthetic process | GO:0009059 | 227 | 0.047 | |
| guanosine containing compound catabolic process | GO:1901069 | 2 | 0.046 | |
| cell cycle process | GO:0022402 | 53 | 0.046 | Fly |
| regulation of biological quality | GO:0065008 | 263 | 0.046 | |
| vasculature development | GO:0001944 | 278 | 0.045 | |
| cell motility | GO:0048870 | 244 | 0.044 | |
| ribonucleoprotein complex assembly | GO:0022618 | 5 | 0.043 | Yeast |
| regulation of apoptotic process | GO:0042981 | 98 | 0.042 | |
| modification dependent protein catabolic process | GO:0019941 | 3 | 0.042 | |
| immune system process | GO:0002376 | 241 | 0.039 | |
| negative regulation of biological process | GO:0048519 | 304 | 0.038 | |
| somitogenesis | GO:0001756 | 87 | 0.037 | |
| cellular localization | GO:0051641 | 97 | 0.036 | |
| regulation of cytoplasmic transport | GO:1903649 | 4 | 0.036 | |
| nucleobase containing compound transport | GO:0015931 | 2 | 0.036 | |
| blood vessel development | GO:0001568 | 246 | 0.035 | |
| nuclear export | GO:0051168 | 1 | 0.035 | |
| regulation of establishment of protein localization | GO:0070201 | 4 | 0.035 | |
| regulation of multicellular organism growth | GO:0040014 | 4 | 0.035 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 13 | 0.034 | Yeast |
| regulation of protein transport | GO:0051223 | 3 | 0.034 | |
| signal transduction | GO:0007165 | 455 | 0.034 | |
| regulation of metabolic process | GO:0019222 | 359 | 0.033 | |
| protein import | GO:0017038 | 3 | 0.033 | |
| organic substance transport | GO:0071702 | 58 | 0.033 | |
| cellular aromatic compound metabolic process | GO:0006725 | 295 | 0.033 | Yeast |
| meiotic chromosome segregation | GO:0045132 | 3 | 0.033 | |
| regulation of multicellular organismal process | GO:0051239 | 277 | 0.032 | |
| single organism intracellular transport | GO:1902582 | 25 | 0.032 | |
| cellular component movement | GO:0006928 | 335 | 0.032 | |
| positive regulation of transport | GO:0051050 | 2 | 0.031 | |
| eye development | GO:0001654 | 277 | 0.030 | |
| positive regulation of apoptotic signaling pathway | GO:2001235 | 1 | 0.029 | |
| multicellular organism growth | GO:0035264 | 4 | 0.029 | |
| apoptotic signaling pathway | GO:0097190 | 23 | 0.029 | |
| regulation of nucleoside metabolic process | GO:0009118 | 2 | 0.028 | |
| cell proliferation involved in heart morphogenesis | GO:0061323 | 2 | 0.027 | |
| cellular component assembly | GO:0022607 | 170 | 0.027 | Yeast |
| regulation of cellular protein metabolic process | GO:0032268 | 52 | 0.027 | |
| gene expression | GO:0010467 | 252 | 0.026 | Yeast |
| cellular macromolecule biosynthetic process | GO:0034645 | 224 | 0.026 | |
| negative regulation of cellular process | GO:0048523 | 283 | 0.026 | |
| hemopoiesis | GO:0030097 | 183 | 0.026 | |
| neuron differentiation | GO:0030182 | 353 | 0.025 | |
| cell surface receptor signaling pathway | GO:0007166 | 325 | 0.025 | |
| rna metabolic process | GO:0016070 | 219 | 0.025 | Yeast |
| regulation of macromolecule metabolic process | GO:0060255 | 317 | 0.025 | |
| regulation of signal transduction | GO:0009966 | 225 | 0.025 | |
| regulation of cell cycle | GO:0051726 | 52 | 0.025 | |
| intracellular transport | GO:0046907 | 32 | 0.024 | |
| establishment of rna localization | GO:0051236 | 3 | 0.024 | |
| chemotaxis | GO:0006935 | 104 | 0.024 | |
| meiosis ii | GO:0007135 | 1 | 0.024 | |
| regulation of primary metabolic process | GO:0080090 | 311 | 0.024 | |
| regulation of protein targeting | GO:1903533 | 2 | 0.024 | |
| gtp metabolic process | GO:0046039 | 4 | 0.024 | |
| translational initiation | GO:0006413 | 3 | 0.023 | |
| positive regulation of cysteine type endopeptidase activity involved in apoptotic process | GO:0043280 | 10 | 0.023 | |
| regulation of protein metabolic process | GO:0051246 | 56 | 0.023 | |
| regulation of intracellular protein transport | GO:0033157 | 3 | 0.023 | |
| regulation of cellular component organization | GO:0051128 | 86 | 0.023 | |
| response to abiotic stimulus | GO:0009628 | 122 | 0.023 | |
| positive regulation of catabolic process | GO:0009896 | 4 | 0.023 | |
| macromolecule localization | GO:0033036 | 54 | 0.023 | |
| regulation of cell communication | GO:0010646 | 232 | 0.022 | |
| cellular component morphogenesis | GO:0032989 | 336 | 0.022 | |
| cell proliferation | GO:0008283 | 80 | 0.022 | |
| positive regulation of cellular catabolic process | GO:0031331 | 3 | 0.022 | |
| cellular amine metabolic process | GO:0044106 | 2 | 0.022 | |
| positive regulation of cellular process | GO:0048522 | 201 | 0.022 | |
| regulation of purine nucleotide catabolic process | GO:0033121 | 2 | 0.022 | |
| protein localization to nucleus | GO:0034504 | 3 | 0.021 | |
| regulation of binding | GO:0051098 | 3 | 0.021 | |
| spindle assembly | GO:0051225 | 2 | 0.021 | |
| regulation of cell size | GO:0008361 | 29 | 0.021 | |
| developmental programmed cell death | GO:0010623 | 4 | 0.021 | |
| nuclear import | GO:0051170 | 3 | 0.021 | |
| generation of neurons | GO:0048699 | 385 | 0.020 | |
| angiogenesis | GO:0001525 | 158 | 0.020 | |
| regulation of gtp catabolic process | GO:0033124 | 2 | 0.020 | |
| multicellular organism reproduction | GO:0032504 | 35 | 0.020 | |
| regulation of nucleotide catabolic process | GO:0030811 | 2 | 0.019 | |
| stem cell differentiation | GO:0048863 | 117 | 0.019 | |
| cell projection organization | GO:0030030 | 284 | 0.019 | |
| single organism nuclear import | GO:1902593 | 3 | 0.019 | |
| regulation of gene expression | GO:0010468 | 265 | 0.019 | |
| homeostatic process | GO:0042592 | 142 | 0.018 | |
| regulation of cellular amine metabolic process | GO:0033238 | 0 | 0.017 | |
| intrinsic apoptotic signaling pathway by p53 class mediator | GO:0072332 | 9 | 0.017 | |
| female meiotic division | GO:0007143 | 2 | 0.017 | |
| cell migration | GO:0016477 | 237 | 0.017 | |
| gamete generation | GO:0007276 | 33 | 0.017 | |
| regulation of protein ubiquitination | GO:0031396 | 3 | 0.017 | |
| negative regulation of dna metabolic process | GO:0051053 | 4 | 0.017 | |
| translation | GO:0006412 | 5 | 0.017 | |
| nucleoside monophosphate catabolic process | GO:0009125 | 4 | 0.017 | |
| regulation of cellular metabolic process | GO:0031323 | 320 | 0.017 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 3 | 0.016 | |
| negative regulation of cell communication | GO:0010648 | 96 | 0.016 | |
| sexual reproduction | GO:0019953 | 36 | 0.016 | |
| neuron development | GO:0048666 | 262 | 0.016 | |
| negative regulation of programmed cell death | GO:0043069 | 58 | 0.016 | |
| negative regulation of apoptotic process | GO:0043066 | 55 | 0.016 | |
| cellular response to external stimulus | GO:0071496 | 2 | 0.016 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.016 | |
| axon development | GO:0061564 | 166 | 0.016 | |
| regulation of proteolysis involved in cellular protein catabolic process | GO:1903050 | 1 | 0.016 | |
| positive regulation of nucleotide catabolic process | GO:0030813 | 1 | 0.016 | |
| primary neural tube formation | GO:0014020 | 1 | 0.016 | |
| head development | GO:0060322 | 303 | 0.016 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 3 | 0.015 | |
| protein targeting to nucleus | GO:0044744 | 3 | 0.015 | |
| regulation of protein import into nucleus | GO:0042306 | 2 | 0.015 | |
| cell part morphogenesis | GO:0032990 | 246 | 0.015 | |
| negative regulation of protein transport | GO:0051224 | 3 | 0.015 | |
| central nervous system development | GO:0007417 | 387 | 0.015 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 4 | 0.015 | |
| rrna metabolic process | GO:0016072 | 8 | 0.015 | Yeast |
| oogenesis | GO:0048477 | 14 | 0.014 | |
| regulation of blood pressure | GO:0008217 | 1 | 0.014 | |
| positive regulation of purine nucleotide catabolic process | GO:0033123 | 1 | 0.014 | |
| embryonic organ morphogenesis | GO:0048562 | 274 | 0.014 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 4 | 0.014 | |
| regulation of programmed cell death | GO:0043067 | 101 | 0.014 | |
| brain development | GO:0007420 | 293 | 0.014 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 2 | 0.014 | |
| cellular protein catabolic process | GO:0044257 | 4 | 0.014 | |
| cell morphogenesis | GO:0000902 | 289 | 0.014 | |
| protein localization | GO:0008104 | 40 | 0.014 | |
| proteasomal protein catabolic process | GO:0010498 | 2 | 0.014 | |
| cellular response to stress | GO:0033554 | 62 | 0.014 | |
| cellular component disassembly | GO:0022411 | 1 | 0.014 | |
| collagen fibril organization | GO:0030199 | 1 | 0.014 | |
| positive regulation of blood circulation | GO:1903524 | 2 | 0.013 | |
| atp catabolic process | GO:0006200 | 4 | 0.013 | |
| endocardial cushion formation | GO:0003272 | 2 | 0.013 | |
| cell cycle g1 s phase transition | GO:0044843 | 1 | 0.013 | |
| regulation of cellular protein catabolic process | GO:1903362 | 1 | 0.013 | |
| regulation of protein modification by small protein conjugation or removal | GO:1903320 | 3 | 0.013 | |
| rna processing | GO:0006396 | 25 | 0.013 | Yeast |
| nitrogen compound transport | GO:0071705 | 23 | 0.013 | |
| blood vessel morphogenesis | GO:0048514 | 216 | 0.013 | |
| developmental growth | GO:0048589 | 166 | 0.013 | |
| positive regulation of biological process | GO:0048518 | 253 | 0.013 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 130 | 0.013 | |
| post golgi vesicle mediated transport | GO:0006892 | 1 | 0.013 | |
| cellular macromolecular complex assembly | GO:0034622 | 24 | 0.013 | Yeast |
| spermatid development | GO:0007286 | 2 | 0.013 | |
| regulation of macromolecule biosynthetic process | GO:0010556 | 225 | 0.013 | |
| regulation of response to stimulus | GO:0048583 | 269 | 0.013 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 2 | 0.013 | |
| regulation of hydrolase activity | GO:0051336 | 28 | 0.013 | |
| anterior posterior pattern specification | GO:0009952 | 152 | 0.013 | |
| myeloid cell differentiation | GO:0030099 | 86 | 0.012 | |
| regulation of cell activation | GO:0050865 | 1 | 0.012 | |
| cellular response to topologically incorrect protein | GO:0035967 | 2 | 0.012 | |
| organic cyclic compound metabolic process | GO:1901360 | 301 | 0.012 | Yeast |
| cellular protein modification process | GO:0006464 | 100 | 0.012 | |
| somite development | GO:0061053 | 96 | 0.012 | |
| homeostasis of number of cells | GO:0048872 | 62 | 0.012 | |
| single organism reproductive process | GO:0044702 | 40 | 0.012 | |
| gtp catabolic process | GO:0006184 | 2 | 0.012 | |
| regulation of protein localization to nucleus | GO:1900180 | 2 | 0.012 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 14 | 0.012 | |
| regulation of nucleobase containing compound metabolic process | GO:0019219 | 250 | 0.012 | |
| single fertilization | GO:0007338 | 3 | 0.012 | |
| sensory organ development | GO:0007423 | 393 | 0.012 | |
| regulation of nitrogen compound metabolic process | GO:0051171 | 251 | 0.012 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 7 | 0.012 | |
| protein targeting to membrane | GO:0006612 | 1 | 0.012 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 1 | 0.011 | |
| regulation of developmental process | GO:0050793 | 247 | 0.011 | |
| regulation of meiotic cell cycle | GO:0051445 | 1 | 0.011 | |
| establishment of protein localization to plasma membrane | GO:0090002 | 1 | 0.011 | |
| regulation of protein catabolic process | GO:0042176 | 1 | 0.011 | |
| regulation of dna templated transcription elongation | GO:0032784 | 3 | 0.011 | |
| organelle localization | GO:0051640 | 49 | 0.011 | |
| phosphorus metabolic process | GO:0006793 | 109 | 0.011 | |
| regulation of chromosome segregation | GO:0051983 | 1 | 0.011 | |
| negative regulation of catabolic process | GO:0009895 | 3 | 0.011 | |
| positive regulation of cell activation | GO:0050867 | 1 | 0.011 | |
| positive regulation of cell adhesion | GO:0045785 | 1 | 0.011 | |
| proteolysis | GO:0006508 | 38 | 0.011 | |
| intrinsic apoptotic signaling pathway | GO:0097193 | 20 | 0.011 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 8 | 0.011 | Yeast |
| cellular response to extracellular stimulus | GO:0031668 | 2 | 0.011 | |
| positive regulation of nucleoside metabolic process | GO:0045979 | 1 | 0.011 | |
| organonitrogen compound metabolic process | GO:1901564 | 74 | 0.011 | |
| rrna processing | GO:0006364 | 7 | 0.010 | Yeast |
| cellular ketone metabolic process | GO:0042180 | 11 | 0.010 | |
| cellular response to nutrient levels | GO:0031669 | 2 | 0.010 | |
| cell projection morphogenesis | GO:0048858 | 244 | 0.010 | |
| regulation of signaling | GO:0023051 | 235 | 0.010 | |
| protein secretion | GO:0009306 | 1 | 0.010 | |
| negative regulation of response to stimulus | GO:0048585 | 104 | 0.010 | |
| calcium mediated signaling | GO:0019722 | 2 | 0.010 | |
| embryonic cranial skeleton morphogenesis | GO:0048701 | 90 | 0.010 | |
| toll like receptor signaling pathway | GO:0002224 | 4 | 0.010 | |
| protein complex disassembly | GO:0043241 | 1 | 0.010 | |
| positive regulation of apoptotic process | GO:0043065 | 29 | 0.010 | |
| regulation of ras gtpase activity | GO:0032318 | 2 | 0.010 | |
