| protein dealkylation | GO:0008214 | 2 | 0.176 | |
| maintenance of location | GO:0051235 | 4 | 0.090 | |
| positive regulation of transport | GO:0051050 | 2 | 0.077 | |
| protein demethylation | GO:0006482 | 2 | 0.073 | |
| larval development | GO:0002164 | 2 | 0.073 | |
| morphogenesis of an epithelium | GO:0002009 | 333 | 0.054 | |
| macromolecule biosynthetic process | GO:0009059 | 227 | 0.054 | |
| central nervous system development | GO:0007417 | 387 | 0.051 | |
| cellular protein catabolic process | GO:0044257 | 4 | 0.050 | |
| regulation of cell development | GO:0060284 | 100 | 0.049 | |
| transcription dna templated | GO:0006351 | 181 | 0.048 | |
| regulation of cell differentiation | GO:0045595 | 142 | 0.047 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 2 | 0.047 | |
| response to external stimulus | GO:0009605 | 264 | 0.046 | |
| histone lysine demethylation | GO:0070076 | 2 | 0.044 | |
| stem cell maintenance | GO:0019827 | 4 | 0.043 | |
| modification dependent protein catabolic process | GO:0019941 | 3 | 0.043 | |
| heterocycle biosynthetic process | GO:0018130 | 215 | 0.043 | |
| regulation of cellular metabolic process | GO:0031323 | 320 | 0.041 | |
| regulation of cell shape | GO:0008360 | 1 | 0.040 | |
| cellular ketone metabolic process | GO:0042180 | 11 | 0.037 | |
| lipid storage | GO:0019915 | 1 | 0.036 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 3 | 0.036 | |
| regulation of cytoplasmic transport | GO:1903649 | 4 | 0.035 | |
| regulation of intracellular protein transport | GO:0033157 | 3 | 0.034 | |
| histone demethylation | GO:0016577 | 2 | 0.034 | |
| system process | GO:0003008 | 185 | 0.033 | |
| regulation of organelle assembly | GO:1902115 | 4 | 0.033 | |
| positive regulation of catabolic process | GO:0009896 | 4 | 0.033 | |
| exocytosis | GO:0006887 | 1 | 0.033 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 3 | 0.032 | |
| regulation of nitrogen compound metabolic process | GO:0051171 | 251 | 0.032 | |
| appendage development | GO:0048736 | 80 | 0.030 | |
| regulation of protein catabolic process | GO:0042176 | 1 | 0.030 | |
| regulation of cellular macromolecule biosynthetic process | GO:2000112 | 222 | 0.028 | |
| epithelial cell differentiation | GO:0030855 | 116 | 0.028 | |
| negative regulation of rna metabolic process | GO:0051253 | 48 | 0.028 | |
| regulation of mrna catabolic process | GO:0061013 | 3 | 0.027 | |
| regulation of establishment of protein localization | GO:0070201 | 4 | 0.027 | |
| regulation of developmental process | GO:0050793 | 247 | 0.027 | |
| angiogenesis | GO:0001525 | 158 | 0.027 | |
| primary neural tube formation | GO:0014020 | 1 | 0.027 | |
| positive regulation of cellular catabolic process | GO:0031331 | 3 | 0.026 | |
| convergent extension | GO:0060026 | 118 | 0.026 | |
| forebrain development | GO:0030900 | 96 | 0.026 | |
| regulation of primary metabolic process | GO:0080090 | 311 | 0.026 | |
| embryonic limb morphogenesis | GO:0030326 | 2 | 0.026 | |
| cellular response to extracellular stimulus | GO:0031668 | 2 | 0.026 | |
| cytokinesis | GO:0000910 | 3 | 0.026 | |
| cellular nitrogen compound biosynthetic process | GO:0044271 | 218 | 0.026 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 3 | 0.025 | |
| rna localization | GO:0006403 | 4 | 0.025 | |
| camera type eye development | GO:0043010 | 222 | 0.025 | |
| blood vessel development | GO:0001568 | 246 | 0.025 | |
| biosynthetic process | GO:0009058 | 294 | 0.024 | |
| protein import into nucleus | GO:0006606 | 3 | 0.024 | |
| cell migration | GO:0016477 | 237 | 0.024 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 7 | 0.023 | |
| gland development | GO:0048732 | 143 | 0.023 | |
| peptidyl lysine acetylation | GO:0018394 | 2 | 0.023 | |
| regulation of protein transport | GO:0051223 | 3 | 0.023 | |
| proteasomal protein catabolic process | GO:0010498 | 2 | 0.023 | |
| cellular biosynthetic process | GO:0044249 | 286 | 0.023 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 3 | 0.022 | |
| single organism nuclear import | GO:1902593 | 3 | 0.022 | |
| regulation of protein import into nucleus | GO:0042306 | 2 | 0.022 | |
| regulation of cellular protein catabolic process | GO:1903362 | 1 | 0.022 | |
| cognition | GO:0050890 | 1 | 0.022 | |
| cell matrix adhesion | GO:0007160 | 4 | 0.022 | |
| regulation of metabolic process | GO:0019222 | 359 | 0.022 | |
| negative regulation of signaling | GO:0023057 | 96 | 0.022 | |
| somite development | GO:0061053 | 96 | 0.021 | |
| tube morphogenesis | GO:0035239 | 349 | 0.021 | |
| organic cyclic compound biosynthetic process | GO:1901362 | 223 | 0.021 | |
| spinal cord development | GO:0021510 | 46 | 0.021 | |
| gene expression | GO:0010467 | 252 | 0.021 | |
| cellular response to nutrient levels | GO:0031669 | 2 | 0.020 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 2 | 0.020 | |
| astral microtubule organization | GO:0030953 | 1 | 0.020 | |
| cellular carbohydrate metabolic process | GO:0044262 | 4 | 0.020 | |
| negative regulation of cellular metabolic process | GO:0031324 | 77 | 0.020 | |
| regulation of epithelial cell proliferation | GO:0050678 | 3 | 0.020 | |
| regulation of cell communication | GO:0010646 | 232 | 0.020 | |
| nitrogen compound metabolic process | GO:0006807 | 319 | 0.020 | |
| transport | GO:0006810 | 220 | 0.020 | |
| embryonic heart tube development | GO:0035050 | 133 | 0.019 | |
| oxoacid metabolic process | GO:0043436 | 31 | 0.019 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 130 | 0.019 | |
| aging | GO:0007568 | 2 | 0.019 | |
| heterocycle metabolic process | GO:0046483 | 290 | 0.019 | |
| cellular response to external stimulus | GO:0071496 | 2 | 0.019 | |
| developmental growth | GO:0048589 | 166 | 0.019 | |
| vasculature development | GO:0001944 | 278 | 0.019 | |
| neurological system process | GO:0050877 | 62 | 0.019 | |
| regulation of macromolecule biosynthetic process | GO:0010556 | 225 | 0.019 | |
| mitotic cell cycle | GO:0000278 | 64 | 0.019 | |
| response to stress | GO:0006950 | 263 | 0.019 | |
| carboxylic acid metabolic process | GO:0019752 | 22 | 0.019 | |
| regulation of stem cell differentiation | GO:2000736 | 4 | 0.018 | |
| regulation of neuron differentiation | GO:0045664 | 56 | 0.018 | |
| regulation of protein binding | GO:0043393 | 3 | 0.018 | |
| regulation of proteolysis involved in cellular protein catabolic process | GO:1903050 | 1 | 0.018 | |
| negative regulation of biological process | GO:0048519 | 304 | 0.018 | |
| protein acylation | GO:0043543 | 3 | 0.018 | |
| cellular component disassembly | GO:0022411 | 1 | 0.018 | |
| locomotor rhythm | GO:0045475 | 3 | 0.018 | |
| organelle localization | GO:0051640 | 49 | 0.017 | |
| cell substrate adhesion | GO:0031589 | 4 | 0.017 | |
| regulation of cellular component organization | GO:0051128 | 86 | 0.017 | |
| regulation of chromosome segregation | GO:0051983 | 1 | 0.017 | |
| regulation of rna biosynthetic process | GO:2001141 | 213 | 0.017 | |
| regulation of multicellular organismal process | GO:0051239 | 277 | 0.017 | |
| positive regulation of cellular process | GO:0048522 | 201 | 0.017 | |
| protein metabolic process | GO:0019538 | 183 | 0.017 | |
| negative regulation of signal transduction | GO:0009968 | 94 | 0.017 | |
| cellular nitrogen compound metabolic process | GO:0034641 | 290 | 0.016 | |
| positive regulation of metabolic process | GO:0009893 | 108 | 0.016 | |
| brain development | GO:0007420 | 293 | 0.016 | |
| regulation of synapse assembly | GO:0051963 | 3 | 0.016 | |
| regulation of biomineral tissue development | GO:0070167 | 2 | 0.016 | |
| positive regulation of notch signaling pathway | GO:0045747 | 3 | 0.016 | |
| regulation of multicellular organism growth | GO:0040014 | 4 | 0.016 | |
| outflow tract morphogenesis | GO:0003151 | 1 | 0.016 | |
| blood vessel morphogenesis | GO:0048514 | 216 | 0.016 | |
| nucleocytoplasmic transport | GO:0006913 | 4 | 0.016 | |
| locomotion | GO:0040011 | 313 | 0.016 | |
| positive regulation of cellular metabolic process | GO:0031325 | 94 | 0.016 | |
| regulation of biological quality | GO:0065008 | 263 | 0.016 | |
| mitotic cytokinesis | GO:0000281 | 3 | 0.016 | |
| dorsal ventral pattern formation | GO:0009953 | 125 | 0.015 | |
| spindle localization | GO:0051653 | 12 | 0.015 | |
| liver development | GO:0001889 | 96 | 0.015 | |
| eye development | GO:0001654 | 277 | 0.015 | |
| establishment of rna localization | GO:0051236 | 3 | 0.015 | |
| regulation of multicellular organismal development | GO:2000026 | 223 | 0.015 | |
| regulation of response to cytokine stimulus | GO:0060759 | 3 | 0.015 | |
| rna biosynthetic process | GO:0032774 | 181 | 0.015 | |
| axon cargo transport | GO:0008088 | 2 | 0.015 | |
| cell motility | GO:0048870 | 244 | 0.015 | |
| regulation of transcription dna templated | GO:0006355 | 213 | 0.015 | |
| negative regulation of gene expression | GO:0010629 | 65 | 0.015 | |
| epithelial tube morphogenesis | GO:0060562 | 148 | 0.015 | |
| positive regulation of secretion | GO:0051047 | 1 | 0.015 | |
| nucleobase containing compound transport | GO:0015931 | 2 | 0.014 | |
| regulation of exocytosis | GO:0017157 | 1 | 0.014 | |
| positive regulation of secretion by cell | GO:1903532 | 1 | 0.014 | |
| transcription elongation from rna polymerase ii promoter | GO:0006368 | 3 | 0.014 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 59 | 0.014 | |
| regulation of organ morphogenesis | GO:2000027 | 35 | 0.014 | |
| digestive tract development | GO:0048565 | 265 | 0.014 | |
| cellular macromolecule metabolic process | GO:0044260 | 391 | 0.014 | |
| nucleobase containing compound biosynthetic process | GO:0034654 | 205 | 0.014 | |
| internal peptidyl lysine acetylation | GO:0018393 | 2 | 0.014 | |
| cellular macromolecule biosynthetic process | GO:0034645 | 224 | 0.014 | |
| nuclear transport | GO:0051169 | 4 | 0.014 | |
| regulation of signal transduction | GO:0009966 | 225 | 0.014 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 59 | 0.014 | |
| cellular macromolecule catabolic process | GO:0044265 | 12 | 0.014 | |
| single organism metabolic process | GO:0044710 | 217 | 0.014 | |
| spermatid differentiation | GO:0048515 | 2 | 0.014 | |
| odontogenesis of dentin containing tooth | GO:0042475 | 1 | 0.014 | |
| skeletal system development | GO:0001501 | 181 | 0.014 | |
| guanosine containing compound metabolic process | GO:1901068 | 4 | 0.014 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 13 | 0.014 | |
| organic acid metabolic process | GO:0006082 | 31 | 0.013 | |
| regulation of apoptotic process | GO:0042981 | 98 | 0.013 | |
| negative regulation of cellular process | GO:0048523 | 283 | 0.013 | |
| mrna 3 end processing | GO:0031124 | 2 | 0.013 | |
| macromolecular complex disassembly | GO:0032984 | 1 | 0.013 | |
| regulation of neurological system process | GO:0031644 | 2 | 0.013 | |
| mitotic dna integrity checkpoint | GO:0044774 | 4 | 0.013 | |
| regulation of protein targeting | GO:1903533 | 2 | 0.013 | |
| anterior posterior pattern specification | GO:0009952 | 152 | 0.013 | |
| internal protein amino acid acetylation | GO:0006475 | 2 | 0.013 | |
| regulation of rna metabolic process | GO:0051252 | 224 | 0.013 | |
| multi organism process | GO:0051704 | 134 | 0.013 | |
| negative regulation of biosynthetic process | GO:0009890 | 55 | 0.013 | |
| regulation of dendrite development | GO:0050773 | 3 | 0.013 | |
| intracellular estrogen receptor signaling pathway | GO:0030520 | 3 | 0.013 | |
| regulation of signaling | GO:0023051 | 235 | 0.013 | |
| protein acetylation | GO:0006473 | 2 | 0.013 | |
| cellular transition metal ion homeostasis | GO:0046916 | 3 | 0.013 | |
| cellular component biogenesis | GO:0044085 | 178 | 0.013 | |
| skin development | GO:0043588 | 54 | 0.012 | |
| negative regulation of cell communication | GO:0010648 | 96 | 0.012 | |
| columnar cuboidal epithelial cell differentiation | GO:0002065 | 38 | 0.012 | |
| neuron differentiation | GO:0030182 | 353 | 0.012 | |
| chordate embryonic development | GO:0043009 | 271 | 0.012 | |
| cellular component morphogenesis | GO:0032989 | 336 | 0.012 | |
| negative regulation of metabolic process | GO:0009892 | 86 | 0.012 | |
| organic substance biosynthetic process | GO:1901576 | 289 | 0.012 | |
| aromatic compound biosynthetic process | GO:0019438 | 217 | 0.012 | |
| cell surface receptor signaling pathway | GO:0007166 | 325 | 0.012 | |
| protein import | GO:0017038 | 3 | 0.012 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 69 | 0.012 | |
| cellular amine metabolic process | GO:0044106 | 2 | 0.012 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 0 | 0.011 | |
| nucleic acid templated transcription | GO:0097659 | 181 | 0.011 | |
| regulation of cellular amine metabolic process | GO:0033238 | 0 | 0.011 | |
| signal transduction | GO:0007165 | 455 | 0.011 | |
| negative regulation of translation | GO:0017148 | 1 | 0.011 | |
| organelle assembly | GO:0070925 | 110 | 0.011 | |
| cell death | GO:0008219 | 121 | 0.011 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 48 | 0.011 | |
| positive regulation of biological process | GO:0048518 | 253 | 0.011 | |
| positive regulation of transcription elongation from rna polymerase ii promoter | GO:0032968 | 1 | 0.011 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 3 | 0.011 | |
| cytoskeleton dependent cytokinesis | GO:0061640 | 3 | 0.011 | |
| rna transport | GO:0050658 | 2 | 0.011 | |
| ras protein signal transduction | GO:0007265 | 7 | 0.011 | |
| mitotic dna damage checkpoint | GO:0044773 | 4 | 0.011 | |
| microtubule organizing center organization | GO:0031023 | 1 | 0.011 | |
| nuclear import | GO:0051170 | 3 | 0.011 | |
| regulation of nucleobase containing compound metabolic process | GO:0019219 | 250 | 0.011 | |
| determination of bilateral symmetry | GO:0009855 | 204 | 0.011 | |
| establishment of protein localization to organelle | GO:0072594 | 4 | 0.011 | |
| adherens junction organization | GO:0034332 | 4 | 0.011 | |
| cell cycle process | GO:0022402 | 53 | 0.011 | |
| regulation of mrna processing | GO:0050684 | 3 | 0.011 | |
| positive regulation of exocytosis | GO:0045921 | 1 | 0.011 | |
| symbiosis encompassing mutualism through parasitism | GO:0044403 | 4 | 0.010 | |
| regulation of myelination | GO:0031641 | 1 | 0.010 | |
| regulation of biosynthetic process | GO:0009889 | 250 | 0.010 | |
| cardiac cell fate commitment | GO:0060911 | 1 | 0.010 | |
| interspecies interaction between organisms | GO:0044419 | 4 | 0.010 | |
| wnt signaling pathway planar cell polarity pathway | GO:0060071 | 4 | 0.010 | |
| cell death in response to oxidative stress | GO:0036473 | 2 | 0.010 | |
| dna biosynthetic process | GO:0071897 | 3 | 0.010 | |
| peptide transport | GO:0015833 | 1 | 0.010 | |
| regulation of protein modification by small protein conjugation or removal | GO:1903320 | 3 | 0.010 | |
| rna 3 end processing | GO:0031123 | 2 | 0.010 | |
| connective tissue development | GO:0061448 | 99 | 0.010 | |
| regulation of synapse organization | GO:0050807 | 3 | 0.010 | |
| cellular component assembly | GO:0022607 | 170 | 0.010 | |
| negative regulation of protein kinase activity | GO:0006469 | 4 | 0.010 | |
| retinoic acid receptor signaling pathway | GO:0048384 | 16 | 0.010 | |
| response to endogenous stimulus | GO:0009719 | 83 | 0.010 | |
