Danio rerio

42 known processes

stm

starmaker

(Aliases: cb885,sb:cb568,sb:cb148,sb:cb584,id:ibd5112)

stm biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
sensory organ developmentGO:00074233930.980
nucleobase containing compound biosynthetic processGO:00346542050.951
regulation of nitrogen compound metabolic processGO:00511712510.861
ion transportGO:00068111140.837
negative regulation of cellular processGO:00485232830.819
inner ear developmentGO:00488391260.788
positive regulation of tyrosine phosphorylation of stat3 proteinGO:004251710.676
cell projection organizationGO:00300302840.638
tyrosine phosphorylation of stat3 proteinGO:004250310.607
regulation of cellular metabolic processGO:00313233200.563
rna metabolic processGO:00160702190.551
regulation of nucleobase containing compound metabolic processGO:00192192500.535
cellular macromolecule biosynthetic processGO:00346452240.521
regulation of tyrosine phosphorylation of stat proteinGO:004250910.510
heterocycle metabolic processGO:00464832900.506
gene expressionGO:00104672520.482
cellular nitrogen compound metabolic processGO:00346412900.442
regulation of tyrosine phosphorylation of stat3 proteinGO:004251610.393
regulation of nucleic acid templated transcriptionGO:19035062130.389
pigment cell differentiationGO:0050931380.346
rna biosynthetic processGO:00327741810.335
regulation of cell communicationGO:00106462320.328
nucleobase containing compound metabolic processGO:00061392740.321
regulation of mechanoreceptor differentiationGO:004563110.315
ear developmentGO:00435831270.314
brain developmentGO:00074202930.307
positive regulation of tyrosine phosphorylation of stat proteinGO:004253110.304
regulation of signalingGO:00230512350.304
establishment of localizationGO:00512342440.293
regulation of biosynthetic processGO:00098892500.293
locomotionGO:00400113130.292
regulation of macromolecule biosynthetic processGO:00105562250.281
regulation of rna biosynthetic processGO:20011412130.280
retina development in camera type eyeGO:00600411460.279
regulation of cellular macromolecule biosynthetic processGO:20001122220.275
cellular biosynthetic processGO:00442492860.264
organic substance biosynthetic processGO:19015762890.260
central nervous system developmentGO:00074173870.258
regulation of rna metabolic processGO:00512522240.257
regulation of gene expressionGO:00104682650.257
mitotic cell cycleGO:0000278640.248
head developmentGO:00603223030.241
regulation of transcription dna templatedGO:00063552130.234
regulation of metabolic processGO:00192223590.234
cell projection morphogenesisGO:00488582440.231
diencephalon developmentGO:0021536580.230
regulation of metal ion transportGO:001095940.229
nucleic acid metabolic processGO:00903042440.227
macromolecule biosynthetic processGO:00090592270.221
determination of bilateral symmetryGO:00098552040.211
cation transportGO:0006812810.208
positive regulation of biological processGO:00485182530.201
regulation of developmental processGO:00507932470.192
transcription dna templatedGO:00063511810.192
nucleic acid templated transcriptionGO:00976591810.187
regulation of inner ear receptor cell differentiationGO:200098010.185
cellular component movementGO:00069283350.181
cell surface receptor signaling pathwayGO:00071663250.178
tyrosine phosphorylation of stat proteinGO:000726010.176
organic cyclic compound biosynthetic processGO:19013622230.166
skin developmentGO:0043588540.164
radial glial cell differentiationGO:006001920.161
generation of neuronsGO:00486993850.161
regulation of primary metabolic processGO:00800903110.158
peripheral nervous system developmentGO:0007422550.158
cell migrationGO:00164772370.157
cellular component morphogenesisGO:00329893360.156
intracellular transportGO:0046907320.156
locus ceruleus developmentGO:002170330.154
camera type eye developmentGO:00430102220.153
response to amino acidGO:004320020.153
negative regulation of biological processGO:00485193040.152
heart morphogenesisGO:00030071560.152
regulation of response to stimulusGO:00485832690.149
response to chemicalGO:00422213200.148
nitrogen compound metabolic processGO:00068073190.148
multi organism processGO:00517041340.147
chordate embryonic developmentGO:00430092710.144
gland developmentGO:00487321430.140
heterocycle biosynthetic processGO:00181302150.138
protein metabolic processGO:00195381830.135
positive regulation of cellular metabolic processGO:0031325940.129
response to external stimulusGO:00096052640.127
cell morphogenesis involved in differentiationGO:00009041950.125
embryonic organ morphogenesisGO:00485622740.122
midbrain developmentGO:0030901280.122
embryonic heart tube developmentGO:00350501330.120
embryonic organ developmentGO:00485683810.120
positive regulation of cellular amine metabolic processGO:003324000.117
behaviorGO:0007610740.115
negative regulation of metabolic processGO:0009892860.112
organic cyclic compound metabolic processGO:19013603010.112
tongue morphogenesisGO:004358730.109
neuron projection developmentGO:00311751800.108
transportGO:00068102200.107
single organism transportGO:00447652060.106
positive regulation of cellular processGO:00485222010.104
organic acid metabolic processGO:0006082310.102
macromolecule localizationGO:0033036540.101
maintenance of locationGO:005123540.101
axonogenesisGO:00074091520.101
blood vessel developmentGO:00015682460.099
cell part morphogenesisGO:00329902460.098
regulation of phosphate metabolic processGO:0019220430.097
negative regulation of cellular metabolic processGO:0031324770.096
cell morphogenesisGO:00009022890.094
cellular ketone metabolic processGO:0042180110.092
cell fate commitmentGO:0045165990.091
cell cycleGO:0007049930.090
carboxylic acid metabolic processGO:0019752220.089
regulation of cell differentiationGO:00455951420.088
endocardial progenitor cell migration to the midline involved in heart field formationGO:000326240.085
regulation of macromolecule metabolic processGO:00602553170.084
signal transductionGO:00071654550.084
multicellular organism reproductionGO:0032504350.083
positive regulation of macromolecule metabolic processGO:0010604930.081
proximal distal pattern formationGO:000995410.080
mitotic cell cycle processGO:1903047480.079
establishment of localization in cellGO:0051649770.079
organelle organizationGO:00069962270.079
nephron morphogenesisGO:007202820.078
negative regulation of signalingGO:0023057960.078
positive regulation of metabolic processGO:00098931080.077
morphogenesis of an epitheliumGO:00020093330.077
cell fate specificationGO:0001708680.076
cellular protein modification processGO:00064641000.073
tube morphogenesisGO:00352393490.072
metal ion transportGO:0030001580.070
lamellipodium assemblyGO:003003210.069
regulation of multicellular organismal developmentGO:20000262230.069
positive regulation of cellular amino acid metabolic processGO:004576400.069
regulation of skeletal muscle tissue developmentGO:004864140.069
regulation of jak stat cascadeGO:004642530.069
specification of organ identityGO:001009220.068
negative regulation of cell fate specificationGO:0009996110.068
neuron differentiationGO:00301823530.068
mesenchyme developmentGO:00604851270.068
small molecule metabolic processGO:0044281770.066
cation transmembrane transportGO:0098655650.066
negative regulation of nitrogen compound metabolic processGO:0051172590.065
negative regulation of nucleobase containing compound metabolic processGO:0045934590.065
transcription from rna polymerase ii promoterGO:0006366800.064
cellular aromatic compound metabolic processGO:00067252950.064
cellular amino acid metabolic processGO:000652070.064
cellular macromolecule metabolic processGO:00442603910.064
phosphate containing compound metabolic processGO:00067961080.064
renal tubule morphogenesisGO:006133310.063
regulation of calcium ion transportGO:005192420.063
regulation of extrinsic apoptotic signaling pathwayGO:200123630.063
response to stressGO:00069502630.063
multicellular organismal reproductive processGO:0048609350.062
cellular localizationGO:0051641970.062
response to abiotic stimulusGO:00096281220.061
regulation of gtpase activityGO:004308720.060
cellular nitrogen compound biosynthetic processGO:00442712180.059
cardioblast migrationGO:000326070.058
vasculogenesisGO:0001570410.056
cell proliferationGO:0008283800.056
hydrogen peroxide metabolic processGO:004274320.055
transmembrane receptor protein tyrosine kinase signaling pathwayGO:0007169420.055
positive regulation of jak stat cascadeGO:004642720.055
regulation of cellular amine metabolic processGO:003323800.054
aromatic compound biosynthetic processGO:00194382170.054
negative regulation of embryonic developmentGO:0045992110.052
astrocyte differentiationGO:004870810.052
inorganic ion transmembrane transportGO:0098660570.052
positive regulation of nitrogen compound metabolic processGO:0051173690.051
macromolecular complex subunit organizationGO:0043933740.051
regulation of cellular biosynthetic processGO:00313262450.051
regulation of biological qualityGO:00650082630.051
phosphorus metabolic processGO:00067931090.051
regulation of cell shapeGO:000836010.051
regulation of tube sizeGO:003515020.051
monovalent inorganic cation transportGO:0015672420.050
macromolecule modificationGO:00434121110.049
rhombomere 6 developmentGO:002157240.049
protein modification processGO:00362111000.049
axon ensheathment in central nervous systemGO:003229120.048
regionalizationGO:00030022740.048
regulation of protein transportGO:005122330.048
sensory organ morphogenesisGO:00905962000.048
oxoacid metabolic processGO:0043436310.047
regulation of peptidyl tyrosine phosphorylationGO:005073010.047
endocrine system developmentGO:0035270650.047
multi organism reproductive processGO:0044703360.046
organonitrogen compound metabolic processGO:1901564740.045
regulation of protein metabolic processGO:0051246560.045
cell proliferation in forebrainGO:002184630.045
protein localizationGO:0008104400.044
ion transmembrane transportGO:0034220910.044
heart developmentGO:00075073130.043
cellular component disassemblyGO:002241110.043
single organism localizationGO:19025782250.042
tissue regenerationGO:0042246740.042
neuroblast proliferationGO:000740520.042
biosynthetic processGO:00090582940.041
muscle cell differentiationGO:00426921390.041
neuron developmentGO:00486662620.041
cell morphogenesis involved in neuron differentiationGO:00486671630.040
regulation of nucleocytoplasmic transportGO:004682220.040
positive regulation of striated muscle tissue developmentGO:004584410.040
inner ear morphogenesisGO:0042472630.040
regulation of cellular amino acid metabolic processGO:000652100.039
cellular protein metabolic processGO:00442671290.039
neural nucleus developmentGO:0048857150.039
otolith developmentGO:0048840320.039
nephron epithelium morphogenesisGO:007208810.039
axis specificationGO:0009798430.038
olfactory placode formationGO:003091010.038
regulation of cellular ketone metabolic processGO:001056570.038
inner ear receptor cell differentiationGO:0060113290.037
positive regulation of signalingGO:0023056560.037
positive regulation of muscle organ developmentGO:004863610.037
nephron tubule morphogenesisGO:007207810.036
protein complex disassemblyGO:004324110.036
regulation of circadian rhythmGO:004275240.036
enzyme linked receptor protein signaling pathwayGO:00071671060.036
regulation of cellular component organizationGO:0051128860.036
cell growthGO:0016049570.036
jak stat cascadeGO:000725950.036
regulation of transmembrane transporter activityGO:002289820.035
cilium morphogenesisGO:0060271850.035
positive regulation of cell matrix adhesionGO:000195410.034
regulation of signal transductionGO:00099662250.034
intestinal cholesterol absorptionGO:003029920.034
pectoral fin developmentGO:0033339500.034
neural tube developmentGO:0021915620.034
single organism cellular localizationGO:1902580460.034
cell cycle processGO:0022402530.033
erk1 and erk2 cascadeGO:007037140.033
divalent inorganic cation transportGO:0072511210.032
single organism organelle organizationGO:19025891990.032
reproductive processGO:0022414400.032
regulation of wnt signaling pathwayGO:0030111530.032
stem cell proliferationGO:007208940.032
epithelial cell differentiationGO:00308551160.032
regulation of localizationGO:00328791040.031
localization of cellGO:00516742440.031
microtubule based processGO:0007017600.031
negative regulation of cellular component organizationGO:0051129160.031
convergent extensionGO:00600261180.031
system processGO:00030081850.030
regulation of blood vessel sizeGO:005088020.030
regulation of cytoplasmic transportGO:190364940.030
guanosine containing compound catabolic processGO:190106920.029
detection of mechanical stimulus involved in sensory perception of soundGO:005091030.029
protein localization to nucleusGO:003450430.029
regulation of cellular protein metabolic processGO:0032268520.029
regulation of protein import into nucleusGO:004230620.028
negative regulation of gene expressionGO:0010629650.028
negative regulation of cellular biosynthetic processGO:0031327550.028
muscle cell fate determinationGO:000752110.027
positive regulation of cytosolic calcium ion concentrationGO:000720440.027
urogenital system developmentGO:0001655970.027
positive regulation of transportGO:005105020.027
regulation of anatomical structure morphogenesisGO:00226031300.027
cellular component assemblyGO:00226071700.027
single organism intracellular transportGO:1902582250.026
blood circulationGO:0008015870.026
regulation of cellular component movementGO:0051270550.026
central nervous system neuron axonogenesisGO:0021955180.026
embryonic camera type eye developmentGO:0031076290.026
central nervous system myelinationGO:002201020.026
positive regulation of signal transductionGO:0009967560.026
response to nutrientGO:000758430.025
eye developmentGO:00016542770.025
retina morphogenesis in camera type eyeGO:0060042790.024
amine metabolic processGO:000930820.024
negative regulation of cellular catabolic processGO:003133030.024
positive regulation of muscle tissue developmentGO:190186310.024
regulation of molecular functionGO:0065009700.024
divalent metal ion transportGO:0070838200.024
protein phosphorylationGO:0006468470.024
regulation of dna replicationGO:000627530.023
negative regulation of cell communicationGO:0010648960.023
axon developmentGO:00615641660.023
regulation of protein phosphorylationGO:0001932180.023
positive regulation of canonical wnt signaling pathwayGO:009026340.023
hair cell differentiationGO:0035315320.023
neuron projection morphogenesisGO:00488121610.023
oligodendrocyte differentiationGO:0048709230.023
regulation of transporter activityGO:003240920.023
regulation of multicellular organismal processGO:00512392770.022
negative regulation of macromolecule metabolic processGO:0010605760.022
semicircular canal formationGO:006087640.022
regulation of behaviorGO:0050795240.022
ectodermal placode morphogenesisGO:0071697320.022
regulation of myelinationGO:003164110.022
epibolyGO:0090504410.022
auditory receptor cell fate determinationGO:004266820.022
androgen metabolic processGO:000820920.022
regulation of intracellular protein transportGO:003315730.022
establishment of mitotic spindle localizationGO:0040001120.021
regulation of blood circulationGO:1903522320.021
regulation of phosphorus metabolic processGO:0051174430.021
angioblast cell migrationGO:003547690.021
taste bud formationGO:006119530.021
regulation of establishment of protein localizationGO:007020140.021
cell migration to the midline involved in heart developmentGO:0003318120.021
blood vessel morphogenesisGO:00485142160.021
neurological system processGO:0050877620.021
regulation of striated muscle tissue developmentGO:001620260.020
regulation of protein modification by small protein conjugation or removalGO:190332030.020
determination of heart left right asymmetryGO:00613711170.020
cellular homeostasisGO:0019725260.020
response to organic substanceGO:00100331530.020
cellular sodium ion homeostasisGO:000688310.020
regulation of transcription from rna polymerase ii promoterGO:00063571140.020
negative regulation of multicellular organismal processGO:0051241690.019
melanocyte migrationGO:009732440.019
negative regulation of catabolic processGO:000989530.019
spindle localizationGO:0051653120.019
determination of left right symmetryGO:00073681790.019
positive regulation of neural precursor cell proliferationGO:200017910.019
anterior posterior pattern specificationGO:00099521520.019
toxin transportGO:190199820.019
larval developmentGO:000216420.019
gtp metabolic processGO:004603940.019
regulation of ion transmembrane transporter activityGO:003241220.018
rhythmic processGO:0048511210.018
kupffer s vesicle developmentGO:0070121500.018
cellular protein complex disassemblyGO:004362410.018
protein importGO:001703830.018
developmental growthGO:00485891660.018
negative regulation of developmental processGO:0051093650.018
single organism nuclear importGO:190259330.018
negative regulation of biosynthetic processGO:0009890550.018
regulation of extrinsic apoptotic signaling pathway in absence of ligandGO:200123910.018
heterocycle catabolic processGO:0046700150.018
epithelial tube morphogenesisGO:00605621480.018
transmembrane transportGO:00550851200.018
embryo development ending in birth or egg hatchingGO:00097922710.018
liver developmentGO:0001889960.018
carbohydrate derivative metabolic processGO:1901135610.017
muscle cell migrationGO:001481240.017
dendrite guidanceGO:007098300.017
regulation of cell migrationGO:0030334400.017
extracellular fibril organizationGO:004320610.017
cellular amine metabolic processGO:004410620.017
cellular component biogenesisGO:00440851780.017
striated muscle cell differentiationGO:00511461290.017
negative regulation of response to stimulusGO:00485851040.017
microtubule cytoskeleton organizationGO:0000226330.017
wnt signaling pathwayGO:0016055800.017
negative regulation of macromolecule biosynthetic processGO:0010558480.017
positive regulation of protein metabolic processGO:0051247230.016
mesodermal cell fate specificationGO:0007501120.016
phosphorylationGO:0016310690.016
regulation of membrane potentialGO:0042391230.016
embryonic skeletal system morphogenesisGO:0048704930.016
negative regulation of cell fate commitmentGO:0010454130.016
otic vesicle developmentGO:0071599420.016
cardioblast migration to the midline involved in heart field formationGO:006097570.016
central nervous system neuron developmentGO:0021954290.016
neuroblast differentiationGO:001401610.016
calcium ion transportGO:0006816180.015
determination of left right asymmetry in nervous systemGO:003554540.015
cell motilityGO:00488702440.015
microtubule depolymerizationGO:000701910.015
response to endogenous stimulusGO:0009719830.015
rhombomere 5 developmentGO:002157140.015
negative regulation of rna metabolic processGO:0051253480.015
regulation of catalytic activityGO:0050790550.015
digestive system developmentGO:00551232890.015
positive regulation of gliogenesisGO:001401520.015
somatic stem cell maintenanceGO:003501910.015
intracellular signal transductionGO:0035556850.014
protein targeting to nucleusGO:004474430.014
cytokinesisGO:000091030.014
skeletal system morphogenesisGO:00487051020.014
response to ketoneGO:190165410.014
cation homeostasisGO:0055080330.014
response to fluid shear stressGO:003440520.014
cardiac ventricle developmentGO:000323190.014
development of primary female sexual characteristicsGO:004654540.014
single organism metabolic processGO:00447102170.014
adult behaviorGO:003053420.014
endodermal cell fate determinationGO:000749320.014
response to drugGO:004249330.014
regulation of nucleoside metabolic processGO:000911820.014
regulation of autophagyGO:001050630.014
chemotaxisGO:00069351040.014
axon guidanceGO:0007411860.014
positive regulation of response to stimulusGO:0048584800.013
sequestering of metal ionGO:005123830.013
embryonic heart tube morphogenesisGO:00031431080.013
heart contractionGO:0060047710.013
nucleobase containing small molecule metabolic processGO:0055086320.013
multicellular organismal signalingGO:0035637220.013
protein import into nucleusGO:000660630.013
regulation of cell proliferationGO:0042127370.013
regulation of intracellular signal transductionGO:1902531570.013
negative regulation of small gtpase mediated signal transductionGO:005105810.013
neuromast hair cell differentiationGO:0048886120.013
nucleocytoplasmic transportGO:000691340.013
regulation of sequestering of calcium ionGO:005128240.013
gabaergic neuron differentiationGO:009715420.013
regulation of ectodermal cell fate specificationGO:004266520.013
kidney morphogenesisGO:0060993150.012
positive regulation of peptidyl tyrosine phosphorylationGO:005073110.012
cytosolic calcium ion transportGO:006040130.012
establishment of protein localization to organelleGO:007259440.012
regulation of jun kinase activityGO:004350630.012
cardiac ventricle morphogenesisGO:000320870.012
iron ion homeostasisGO:005507240.012
positive regulation of nucleobase containing compound metabolic processGO:0045935690.012
negative regulation of stem cell differentiationGO:200073720.012
cell deathGO:00082191210.012
skeletal muscle fiber developmentGO:0048741350.012
neuron projection guidanceGO:0097485860.012
cell fate determinationGO:000170970.012
regulation of gtp catabolic processGO:003312420.012
negative regulation of axon extension involved in axon guidanceGO:004884310.012
microtubule polymerizationGO:004678520.012
glial cell differentiationGO:0010001420.012
gliogenesisGO:0042063450.012
inner ear receptor cell fate commitmentGO:006012040.011
positive regulation of molecular functionGO:0044093330.011
regulation of mesoderm developmentGO:2000380110.011
positive regulation of cellular catabolic processGO:003133130.011
regulation of system processGO:0044057400.011
fin developmentGO:0033333770.011
cognitionGO:005089010.011
positive regulation of macromolecule biosynthetic processGO:0010557590.011
cytoskeleton organizationGO:0007010960.011
growthGO:00400071740.011
guanosine containing compound metabolic processGO:190106840.011
gtp catabolic processGO:000618420.011
mapk cascadeGO:0000165180.011
protein complex assemblyGO:0006461300.011
organophosphate metabolic processGO:0019637370.011
regulation of nervous system developmentGO:0051960900.010
negative regulation of cellular macromolecule biosynthetic processGO:2000113480.010
regulation of heart contractionGO:0008016320.010
cell cycle g2 m phase transitionGO:004483940.010
regulation of transportGO:0051049450.010
striated muscle cell developmentGO:00550021080.010
toll like receptor signaling pathwayGO:000222440.010
negative regulation of axon guidanceGO:190266810.010
regulation of protein localization to nucleusGO:190018020.010
regulation of protein modification processGO:0031399290.010
positive regulation of cellular component biogenesisGO:004408930.010
regulation of protein targetingGO:190353320.010

stm disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
sensory system diseaseDOID:005015500.305
auditory system diseaseDOID:274200.305
disease of anatomical entityDOID:700.305
nervous system diseaseDOID:86300.305
nonsyndromic deafnessDOID:005056300.305
autosomal dominant nonsyndromic deafnessDOID:005056400.305