| regulation of macromolecule metabolic process | GO:0060255 | 317 | 0.274 | |
| regulation of metabolic process | GO:0019222 | 359 | 0.259 | |
| regulation of nitrogen compound metabolic process | GO:0051171 | 251 | 0.251 | |
| nitrogen compound metabolic process | GO:0006807 | 319 | 0.239 | |
| cellular nitrogen compound biosynthetic process | GO:0044271 | 218 | 0.222 | |
| gene expression | GO:0010467 | 252 | 0.162 | |
| regulation of primary metabolic process | GO:0080090 | 311 | 0.154 | |
| nucleic acid metabolic process | GO:0090304 | 244 | 0.153 | |
| cellular nitrogen compound metabolic process | GO:0034641 | 290 | 0.150 | |
| rna metabolic process | GO:0016070 | 219 | 0.142 | |
| cellular macromolecule metabolic process | GO:0044260 | 391 | 0.120 | |
| nucleobase containing compound metabolic process | GO:0006139 | 274 | 0.114 | |
| regulation of transcription dna templated | GO:0006355 | 213 | 0.113 | |
| signal transduction | GO:0007165 | 455 | 0.103 | Zebrafish |
| regulation of signaling | GO:0023051 | 235 | 0.099 | Zebrafish |
| regulation of molecular function | GO:0065009 | 70 | 0.099 | |
| aging | GO:0007568 | 2 | 0.098 | |
| larval development | GO:0002164 | 2 | 0.097 | |
| digestive system development | GO:0055123 | 289 | 0.096 | |
| regulation of signal transduction | GO:0009966 | 225 | 0.094 | Zebrafish |
| embryo development ending in birth or egg hatching | GO:0009792 | 271 | 0.085 | |
| regulation of cellular metabolic process | GO:0031323 | 320 | 0.084 | |
| regulation of nucleobase containing compound metabolic process | GO:0019219 | 250 | 0.083 | |
| heterocycle metabolic process | GO:0046483 | 290 | 0.080 | |
| nucleobase containing compound biosynthetic process | GO:0034654 | 205 | 0.080 | |
| stem cell division | GO:0017145 | 1 | 0.074 | |
| cellular macromolecule biosynthetic process | GO:0034645 | 224 | 0.071 | |
| rna biosynthetic process | GO:0032774 | 181 | 0.069 | |
| regulation of biosynthetic process | GO:0009889 | 250 | 0.069 | |
| negative regulation of cellular process | GO:0048523 | 283 | 0.068 | Zebrafish |
| regulation of cellular macromolecule biosynthetic process | GO:2000112 | 222 | 0.066 | |
| heterocycle biosynthetic process | GO:0018130 | 215 | 0.064 | |
| transcription dna templated | GO:0006351 | 181 | 0.064 | |
| regulation of rna metabolic process | GO:0051252 | 224 | 0.064 | |
| intracellular signal transduction | GO:0035556 | 85 | 0.060 | |
| regulation of gene expression | GO:0010468 | 265 | 0.060 | |
| regionalization | GO:0003002 | 274 | 0.059 | |
| cellular aromatic compound metabolic process | GO:0006725 | 295 | 0.059 | |
| vasculature development | GO:0001944 | 278 | 0.057 | |
| negative regulation of biological process | GO:0048519 | 304 | 0.057 | Zebrafish |
| regulation of macromolecule biosynthetic process | GO:0010556 | 225 | 0.056 | |
| cellular biosynthetic process | GO:0044249 | 286 | 0.055 | |
| organic cyclic compound biosynthetic process | GO:1901362 | 223 | 0.054 | |
| regulation of binding | GO:0051098 | 3 | 0.054 | |
| organic cyclic compound metabolic process | GO:1901360 | 301 | 0.052 | |
| positive regulation of biological process | GO:0048518 | 253 | 0.050 | |
| negative regulation of cytokine production | GO:0001818 | 1 | 0.049 | Zebrafish |
| blood vessel development | GO:0001568 | 246 | 0.049 | |
| positive regulation of cellular catabolic process | GO:0031331 | 3 | 0.047 | |
| cell surface receptor signaling pathway | GO:0007166 | 325 | 0.046 | Zebrafish |
| amine metabolic process | GO:0009308 | 2 | 0.045 | |
| nucleic acid templated transcription | GO:0097659 | 181 | 0.044 | |
| locomotion | GO:0040011 | 313 | 0.044 | |
| oocyte maturation | GO:0001556 | 4 | 0.043 | |
| blood vessel morphogenesis | GO:0048514 | 216 | 0.043 | |
| positive regulation of cell cycle | GO:0045787 | 3 | 0.043 | |
| regulation of cellular biosynthetic process | GO:0031326 | 245 | 0.042 | |
| organonitrogen compound metabolic process | GO:1901564 | 74 | 0.041 | |
| spermatid development | GO:0007286 | 2 | 0.041 | |
| neuron projection development | GO:0031175 | 180 | 0.041 | |
| regulation of nucleic acid templated transcription | GO:1903506 | 213 | 0.040 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 191 | 0.040 | |
| macromolecule biosynthetic process | GO:0009059 | 227 | 0.040 | |
| negative regulation of biosynthetic process | GO:0009890 | 55 | 0.039 | |
| regulation of cyclin dependent protein serine threonine kinase activity | GO:0000079 | 1 | 0.039 | |
| cellular component biogenesis | GO:0044085 | 178 | 0.038 | |
| neuron differentiation | GO:0030182 | 353 | 0.038 | |
| meiotic nuclear division | GO:0007126 | 4 | 0.037 | |
| hemopoiesis | GO:0030097 | 183 | 0.037 | |
| regulation of circadian rhythm | GO:0042752 | 4 | 0.035 | |
| positive regulation of map kinase activity | GO:0043406 | 3 | 0.034 | |
| maintenance of location | GO:0051235 | 4 | 0.033 | |
| negative regulation of signaling | GO:0023057 | 96 | 0.033 | Zebrafish |
| cellular component assembly | GO:0022607 | 170 | 0.032 | |
| cellular amine metabolic process | GO:0044106 | 2 | 0.032 | |
| negative regulation of cellular metabolic process | GO:0031324 | 77 | 0.032 | |
| regulation of cell death | GO:0010941 | 103 | 0.032 | |
| response to ketone | GO:1901654 | 1 | 0.032 | |
| cell motility | GO:0048870 | 244 | 0.031 | |
| regulation of developmental process | GO:0050793 | 247 | 0.031 | |
| regulation of multicellular organismal process | GO:0051239 | 277 | 0.030 | Zebrafish |
| multi organism process | GO:0051704 | 134 | 0.030 | |
| stem cell maintenance | GO:0019827 | 4 | 0.030 | |
| positive regulation of catabolic process | GO:0009896 | 4 | 0.030 | |
| response to topologically incorrect protein | GO:0035966 | 2 | 0.029 | |
| regulation of rna biosynthetic process | GO:2001141 | 213 | 0.028 | |
| regulation of embryonic development | GO:0045995 | 47 | 0.028 | |
| glucose homeostasis | GO:0042593 | 1 | 0.027 | |
| germ line stem cell maintenance | GO:0030718 | 2 | 0.027 | |
| regulation of carbohydrate metabolic process | GO:0006109 | 4 | 0.027 | |
| regulation of cytokine production | GO:0001817 | 3 | 0.027 | Zebrafish |
| immune system development | GO:0002520 | 191 | 0.027 | |
| sensory organ development | GO:0007423 | 393 | 0.026 | |
| response to stress | GO:0006950 | 263 | 0.026 | Zebrafish |
| response to vitamin | GO:0033273 | 3 | 0.026 | |
| single organism organelle organization | GO:1902589 | 199 | 0.026 | |
| heart development | GO:0007507 | 313 | 0.026 | |
| apoptotic process | GO:0006915 | 116 | 0.026 | |
| biosynthetic process | GO:0009058 | 294 | 0.026 | |
| development of primary female sexual characteristics | GO:0046545 | 4 | 0.026 | |
| regulation of cell communication | GO:0010646 | 232 | 0.025 | Zebrafish |
| activation of mapk activity | GO:0000187 | 3 | 0.025 | |
| tube morphogenesis | GO:0035239 | 349 | 0.025 | |
| immune system process | GO:0002376 | 241 | 0.025 | Zebrafish |
| positive regulation of cytokine production | GO:0001819 | 2 | 0.024 | |
| blood circulation | GO:0008015 | 87 | 0.024 | |
| heart contraction | GO:0060047 | 71 | 0.024 | |
| negative regulation of reproductive process | GO:2000242 | 3 | 0.024 | |
| protein metabolic process | GO:0019538 | 183 | 0.024 | |
| lateral inhibition | GO:0046331 | 1 | 0.024 | |
| regulation of apoptotic process | GO:0042981 | 98 | 0.024 | |
| developmental growth involved in morphogenesis | GO:0060560 | 86 | 0.024 | |
| regulation of reproductive process | GO:2000241 | 4 | 0.024 | |
| neuron development | GO:0048666 | 262 | 0.023 | |
| central nervous system development | GO:0007417 | 387 | 0.023 | |
| cellular response to extracellular stimulus | GO:0031668 | 2 | 0.023 | |
| digestive tract development | GO:0048565 | 265 | 0.023 | |
| gastrulation | GO:0007369 | 208 | 0.023 | |
| transport | GO:0006810 | 220 | 0.023 | |
| regulation of multicellular organism growth | GO:0040014 | 4 | 0.023 | |
| circulatory system process | GO:0003013 | 87 | 0.022 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 55 | 0.022 | |
| establishment of localization | GO:0051234 | 244 | 0.022 | |
| developmental growth | GO:0048589 | 166 | 0.021 | |
| cellular response to external stimulus | GO:0071496 | 2 | 0.021 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 69 | 0.021 | |
| cell death | GO:0008219 | 121 | 0.021 | |
| guanosine containing compound catabolic process | GO:1901069 | 2 | 0.021 | |
| regulation of bmp signaling pathway | GO:0030510 | 39 | 0.021 | |
| death | GO:0016265 | 121 | 0.021 | |
| digestive tract morphogenesis | GO:0048546 | 231 | 0.021 | |
| regulation of establishment of protein localization | GO:0070201 | 4 | 0.021 | |
| positive regulation of response to stimulus | GO:0048584 | 80 | 0.020 | |
| positive regulation of cellular process | GO:0048522 | 201 | 0.020 | |
| ovarian follicle development | GO:0001541 | 2 | 0.020 | |
| negative regulation of apoptotic process | GO:0043066 | 55 | 0.020 | |
| angiogenesis | GO:0001525 | 158 | 0.020 | |
| regulation of cellular carbohydrate metabolic process | GO:0010675 | 4 | 0.019 | |
| cell part morphogenesis | GO:0032990 | 246 | 0.019 | |
| epidermis development | GO:0008544 | 48 | 0.019 | |
| embryonic organ development | GO:0048568 | 381 | 0.019 | |
| cell maturation | GO:0048469 | 23 | 0.019 | |
| heart process | GO:0003015 | 71 | 0.019 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 76 | 0.019 | |
| regulation of intracellular signal transduction | GO:1902531 | 57 | 0.018 | |
| cell projection organization | GO:0030030 | 284 | 0.018 | |
| phosphate containing compound metabolic process | GO:0006796 | 108 | 0.018 | |
| localization of cell | GO:0051674 | 244 | 0.018 | |
| positive regulation of transport | GO:0051050 | 2 | 0.018 | |
| generation of neurons | GO:0048699 | 385 | 0.018 | |
| gtp metabolic process | GO:0046039 | 4 | 0.018 | |
| specification of symmetry | GO:0009799 | 204 | 0.018 | |
| regulation of catalytic activity | GO:0050790 | 55 | 0.018 | |
| epithelial cell differentiation | GO:0030855 | 116 | 0.018 | |
| phosphorus metabolic process | GO:0006793 | 109 | 0.018 | |
| regulation of cellular amine metabolic process | GO:0033238 | 0 | 0.017 | |
| macromolecule modification | GO:0043412 | 111 | 0.017 | |
| response to wounding | GO:0009611 | 116 | 0.017 | |
| bmp signaling pathway | GO:0030509 | 52 | 0.017 | |
| cellular carbohydrate metabolic process | GO:0044262 | 4 | 0.017 | |
| positive regulation of protein kinase b signaling | GO:0051897 | 1 | 0.017 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 59 | 0.017 | |
| determination of bilateral symmetry | GO:0009855 | 204 | 0.016 | |
| axonogenesis | GO:0007409 | 152 | 0.016 | |
| gtp catabolic process | GO:0006184 | 2 | 0.016 | |
| cell morphogenesis | GO:0000902 | 289 | 0.016 | |
| organic substance biosynthetic process | GO:1901576 | 289 | 0.016 | |
| regulation of biological quality | GO:0065008 | 263 | 0.016 | |
| regulation of multicellular organismal development | GO:2000026 | 223 | 0.016 | |
| growth | GO:0040007 | 174 | 0.016 | |
| regulation of proteolysis | GO:0030162 | 24 | 0.016 | |
| brain development | GO:0007420 | 293 | 0.016 | |
| cellular process involved in reproduction in multicellular organism | GO:0022412 | 28 | 0.016 | |
| negative regulation of molecular function | GO:0044092 | 23 | 0.016 | |
| single organism metabolic process | GO:0044710 | 217 | 0.015 | |
| cellular component movement | GO:0006928 | 335 | 0.015 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 114 | 0.015 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 106 | 0.015 | |
| cell projection morphogenesis | GO:0048858 | 244 | 0.015 | |
| stem cell proliferation | GO:0072089 | 4 | 0.015 | |
| multicellular organism growth | GO:0035264 | 4 | 0.015 | |
| positive regulation of cellular metabolic process | GO:0031325 | 94 | 0.015 | |
| specification of organ identity | GO:0010092 | 2 | 0.015 | |
| regulation of defense response | GO:0031347 | 14 | 0.015 | Zebrafish |
| regulation of cellular component organization | GO:0051128 | 86 | 0.015 | |
| cell migration involved in gastrulation | GO:0042074 | 79 | 0.015 | |
| cellular response to nutrient levels | GO:0031669 | 2 | 0.015 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 80 | 0.015 | |
| regulation of programmed cell death | GO:0043067 | 101 | 0.014 | |
| dicarboxylic acid metabolic process | GO:0043648 | 1 | 0.014 | |
| regulation of inflammatory response | GO:0050727 | 2 | 0.014 | |
| cell proliferation | GO:0008283 | 80 | 0.014 | |
| ameboidal type cell migration | GO:0001667 | 143 | 0.014 | |
| regulation of immune system process | GO:0002682 | 34 | 0.014 | Zebrafish |
| cytokinesis | GO:0000910 | 3 | 0.014 | |
| segmentation | GO:0035282 | 97 | 0.014 | |
| collagen metabolic process | GO:0032963 | 2 | 0.014 | |
| macromolecular complex subunit organization | GO:0043933 | 74 | 0.014 | |
| negative regulation of metabolic process | GO:0009892 | 86 | 0.014 | |
| single organism localization | GO:1902578 | 225 | 0.013 | |
| circadian sleep wake cycle process | GO:0022410 | 2 | 0.013 | |
| skin development | GO:0043588 | 54 | 0.013 | |
| head development | GO:0060322 | 303 | 0.013 | |
| lipid storage | GO:0019915 | 1 | 0.013 | |
| female sex differentiation | GO:0046660 | 4 | 0.013 | |
| female gonad development | GO:0008585 | 4 | 0.013 | |
| negative regulation of tor signaling | GO:0032007 | 2 | 0.013 | |
| cellular response to unfolded protein | GO:0034620 | 2 | 0.013 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 48 | 0.013 | |
| developmental maturation | GO:0021700 | 34 | 0.012 | |
| regulation of response to cytokine stimulus | GO:0060759 | 3 | 0.012 | Zebrafish |
| dna alkylation | GO:0006305 | 8 | 0.012 | |
| negative regulation of innate immune response | GO:0045824 | 2 | 0.012 | Zebrafish |
| protein complex subunit organization | GO:0071822 | 46 | 0.012 | |
| cellular ketone metabolic process | GO:0042180 | 11 | 0.012 | |
| regulation of oocyte development | GO:0060281 | 3 | 0.012 | |
| chordate embryonic development | GO:0043009 | 271 | 0.012 | |
| heart field specification | GO:0003128 | 1 | 0.012 | |
| positive regulation of metabolic process | GO:0009893 | 108 | 0.012 | |
| neuroblast proliferation | GO:0007405 | 2 | 0.012 | |
| cellular protein modification process | GO:0006464 | 100 | 0.011 | |
| regulation of response to stimulus | GO:0048583 | 269 | 0.011 | Zebrafish |
| negative regulation of cell death | GO:0060548 | 60 | 0.011 | |
| male meiosis | GO:0007140 | 2 | 0.011 | |
| cell migration | GO:0016477 | 237 | 0.011 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 93 | 0.011 | |
| adult behavior | GO:0030534 | 2 | 0.011 | |
| negative regulation of nuclear division | GO:0051784 | 3 | 0.011 | |
| response to chemical | GO:0042221 | 320 | 0.011 | Zebrafish |
| energy reserve metabolic process | GO:0006112 | 2 | 0.011 | |
| mitotic cell cycle | GO:0000278 | 64 | 0.011 | |
| nucleoside monophosphate catabolic process | GO:0009125 | 4 | 0.011 | |
| regulation of nucleoside metabolic process | GO:0009118 | 2 | 0.011 | |
| regulation of response to nutrient levels | GO:0032107 | 1 | 0.011 | |
| developmental cell growth | GO:0048588 | 52 | 0.011 | |
| spindle assembly | GO:0051225 | 2 | 0.011 | |
| negative regulation of cytokine mediated signaling pathway | GO:0001960 | 2 | 0.011 | Zebrafish |
| regulation of phosphate metabolic process | GO:0019220 | 43 | 0.010 | |
| multicellular organism reproduction | GO:0032504 | 35 | 0.010 | |
| protein phosphorylation | GO:0006468 | 47 | 0.010 | |
| positive regulation of immune effector process | GO:0002699 | 3 | 0.010 | |
| post anal tail morphogenesis | GO:0036342 | 19 | 0.010 | |
| positive regulation of signal transduction | GO:0009967 | 56 | 0.010 | |
| regulation of purine nucleotide catabolic process | GO:0033121 | 2 | 0.010 | |
| cell aging | GO:0007569 | 2 | 0.010 | |
| meiotic cell cycle process | GO:1903046 | 3 | 0.010 | |
| response to glucocorticoid | GO:0051384 | 1 | 0.010 | |
| negative regulation of multi organism process | GO:0043901 | 3 | 0.010 | |
| muscle cell development | GO:0055001 | 115 | 0.010 | |
| microtubule organizing center organization | GO:0031023 | 1 | 0.010 | |
| cellular localization | GO:0051641 | 97 | 0.010 | |
