Danio rerio

6 known processes

opn1lw1

opsin 1 (cone pigments), long-wave-sensitive, 1

(Aliases: zfred,LWS-1,rdops)

opn1lw1 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
light induced release of internally sequestered calcium ionGO:000837710.992
Zebrafish
photoperiodismGO:0009648110.954
light absorptionGO:001603720.942
Zebrafish
phototransductionGO:000760220.940
Zebrafish
phototransduction visible lightGO:000760320.899
Zebrafish
rhodopsin mediated signaling pathwayGO:001605610.854
Zebrafish
detection of stimulusGO:0051606290.840
Zebrafish
detection of visible lightGO:0009584120.771
Zebrafish
response to abiotic stimulusGO:00096281220.766
cell surface receptor signaling pathwayGO:00071663250.687
Zebrafish
g protein coupled receptor signaling pathwayGO:0007186740.680
Zebrafish
cellular response to radiationGO:007147840.670
Zebrafish
signal transductionGO:00071654550.575
Zebrafish
positive regulation of metabolic processGO:00098931080.531
regulation of biological qualityGO:00650082630.528
Zebrafish
response to light stimulusGO:0009416460.502
sensory organ developmentGO:00074233930.478
cellular response to light stimulusGO:007148240.439
Zebrafish
regulation of sequestering of calcium ionGO:005128240.415
Zebrafish
detection of light stimulusGO:0009583120.360
Zebrafish
immune system processGO:00023762410.328
regulation of guanylate cyclase activityGO:003128260.306
cellular nitrogen compound biosynthetic processGO:00442712180.289
absorption of visible lightGO:001603820.286
Zebrafish
retina development in camera type eyeGO:00600411460.280
nitrogen compound metabolic processGO:00068073190.278
agingGO:000756820.268
eye developmentGO:00016542770.263
establishment of endothelial blood brain barrierGO:001404520.253
actomyosin structure organizationGO:0031032530.247
neurological system processGO:0050877620.241
cellular nitrogen compound metabolic processGO:00346412900.241
morphogenesis of an epithelial sheetGO:0002011490.223
sequestering of calcium ionGO:005120830.221
Zebrafish
regulation of macromolecule metabolic processGO:00602553170.212
positive regulation of cyclic nucleotide biosynthetic processGO:003080480.208
cyclic purine nucleotide metabolic processGO:0052652180.204
sensory organ morphogenesisGO:00905962000.203
cellular response to chemical stimulusGO:00708871570.201
regulation of nitrogen compound metabolic processGO:00511712510.199
response to radiationGO:0009314510.198
circadian sleep wake cycle processGO:002241020.189
divalent inorganic cation homeostasisGO:0072507220.189
Zebrafish
regulation of circadian sleep wake cycle sleepGO:004518710.184
hematopoietic or lymphoid organ developmentGO:00485341910.183
detection of abiotic stimulusGO:0009582240.182
Zebrafish
multicellular organismal homeostasisGO:0048871290.179
cgmp metabolic processGO:004606870.179
homeostatic processGO:00425921420.179
Zebrafish
cellular component movementGO:00069283350.177
heterocycle biosynthetic processGO:00181302150.177
regulation of localizationGO:00328791040.170
Zebrafish
regulation of metabolic processGO:00192223590.167
hemopoiesisGO:00300971830.161
purine containing compound biosynthetic processGO:0072522200.152
nucleobase containing compound biosynthetic processGO:00346542050.150
metal ion homeostasisGO:0055065260.140
Zebrafish
regulation of cellular biosynthetic processGO:00313262450.134
morphogenesis of an epitheliumGO:00020093330.134
ribonucleotide biosynthetic processGO:0009260200.131
negative regulation of biological processGO:00485193040.130
Zebrafish
regulation of cell communicationGO:00106462320.123
epiboly involved in gastrulation with mouth forming secondGO:0055113350.122
epibolyGO:0090504410.119
regulation of cgmp metabolic processGO:003082360.119
maintenance of locationGO:005123540.116
Zebrafish
detection of external stimulusGO:0009581240.116
Zebrafish
sensory perception of chemical stimulusGO:000760630.114
cellular aromatic compound metabolic processGO:00067252950.114
negative regulation of sequestering of calcium ionGO:005128340.107
Zebrafish
localization of cellGO:00516742440.106
cell motilityGO:00488702440.106
cellular component assemblyGO:00226071700.106
sequestering of metal ionGO:005123830.105
Zebrafish
ameboidal type cell migrationGO:00016671430.104
organonitrogen compound metabolic processGO:1901564740.099
digestive tract morphogenesisGO:00485462310.098
circadian sleep wake cycleGO:004274520.097
response to light intensityGO:000964210.094
sensory perception of light stimulusGO:0050953190.094
cgmp biosynthetic processGO:000618270.094
regulation of circadian sleep wake cycleGO:004274910.094
single organism organelle organizationGO:19025891990.092
system processGO:00030081850.092
regulation of primary metabolic processGO:00800903110.088
regulation of programmed cell deathGO:00430671010.088
sensory perceptionGO:0007600390.087
positive regulation of biological processGO:00485182530.085
Human
regulation of molecular functionGO:0065009700.084
cellular component assembly involved in morphogenesisGO:00109271070.083
positive regulation of purine nucleotide biosynthetic processGO:190037380.083
positive regulation of cellular processGO:00485222010.083
Human
nucleoside phosphate biosynthetic processGO:1901293210.082
organic cyclic compound biosynthetic processGO:19013622230.082
organelle organizationGO:00069962270.081
immune system developmentGO:00025201910.079
actin cytoskeleton organizationGO:0030036630.079
regulation of cellular metabolic processGO:00313233200.079
regulation of nucleobase containing compound metabolic processGO:00192192500.078
heterocycle metabolic processGO:00464832900.078
cellular biosynthetic processGO:00442492860.077
positive regulation of cellular metabolic processGO:0031325940.076
generation of neuronsGO:00486993850.076
transportGO:00068102200.075
intracellular estrogen receptor signaling pathwayGO:003052030.074
cell growthGO:0016049570.073
negative regulation of cellular processGO:00485232830.072
Zebrafish
positive regulation of map kinase activityGO:004340630.071
purine nucleotide biosynthetic processGO:0006164200.071
regulation of signalingGO:00230512350.070
small molecule metabolic processGO:0044281770.070
cellular calcium ion homeostasisGO:0006874130.070
Zebrafish
response to stressGO:00069502630.068
cellular component morphogenesisGO:00329893360.068
cellular amine metabolic processGO:004410620.068
photoreceptor cell differentiationGO:0046530550.067
positive regulation of nucleotide biosynthetic processGO:003081080.067
glucose homeostasisGO:004259310.067
cyclic nucleotide metabolic processGO:0009187180.067
cation homeostasisGO:0055080330.066
Zebrafish
visual perceptionGO:0007601170.066
cellular component biogenesisGO:00440851780.065
gastrulationGO:00073692080.065
calcium ion homeostasisGO:0055074190.064
Zebrafish
carbohydrate derivative metabolic processGO:1901135610.064
medial fin developmentGO:0033338160.062
eye photoreceptor cell differentiationGO:0001754450.062
organonitrogen compound biosynthetic processGO:1901566470.062
macromolecule modificationGO:00434121110.061
phosphorus metabolic processGO:00067931090.059
purine ribonucleotide biosynthetic processGO:0009152200.059
positive regulation of macromolecule metabolic processGO:0010604930.058
nucleocytoplasmic transportGO:000691340.058
angiogenesisGO:00015251580.058
central nervous system developmentGO:00074173870.057
unidimensional cell growthGO:000982650.057
regulation of biosynthetic processGO:00098892500.057
regulation of cyclic nucleotide metabolic processGO:0030799150.056
cellular cation homeostasisGO:0030003170.056
Zebrafish
regulation of gene expressionGO:00104682650.056
circadian sleep wake cycle sleepGO:005080210.056
regulation of cyclic nucleotide biosynthetic processGO:0030802150.056
response to external stimulusGO:00096052640.055
Zebrafish
regulation of response to stimulusGO:00485832690.055
transmission of nerve impulseGO:0019226190.055
eye morphogenesisGO:00485921440.055
cell migration involved in gastrulationGO:0042074790.054
regulation of cgmp biosynthetic processGO:003082660.052
activation of mapk activityGO:000018730.051
cyclic nucleotide biosynthetic processGO:0009190180.051
muscle structure developmentGO:00610611960.050
organophosphate biosynthetic processGO:0090407230.050
convergent extensionGO:00600261180.049
regulation of purine nucleotide biosynthetic processGO:1900371150.049
response to drugGO:004249330.047
regulation of signal transductionGO:00099662250.047
positive regulation of nucleobase containing compound metabolic processGO:0045935690.047
positive regulation of transportGO:005105020.047
positive regulation of biosynthetic processGO:0009891680.047
regulation of intracellular phGO:005145310.047
heart developmentGO:00075073130.047
stem cell proliferationGO:007208940.046
response to chemicalGO:00422213200.046
positive regulation of cell communicationGO:0010647560.046
growthGO:00400071740.046
cellular metal ion homeostasisGO:0006875160.046
Zebrafish
response to organic substanceGO:00100331530.046
response to uvGO:000941130.045
taxisGO:00423301090.045
neuron developmentGO:00486662620.045
aromatic compound biosynthetic processGO:00194382170.045
eye photoreceptor cell developmentGO:0042462300.044
negative regulation of signalingGO:0023057960.044
nucleobase containing compound metabolic processGO:00061392740.044
regulation of inflammatory responseGO:005072720.044
blood vessel developmentGO:00015682460.043
circadian rhythmGO:0007623190.043
behaviorGO:0007610740.043
cellular macromolecule metabolic processGO:00442603910.043
regulation of nucleocytoplasmic transportGO:004682220.042
cell migrationGO:00164772370.042
single organism metabolic processGO:00447102170.041
enzyme linked receptor protein signaling pathwayGO:00071671060.041
protein metabolic processGO:00195381830.041
circadian regulation of gene expressionGO:003292280.040
gene expressionGO:00104672520.039
stem cell divisionGO:001714510.039
regulation of membrane potentialGO:0042391230.038
organic substance biosynthetic processGO:19015762890.038
single organismal cell cell adhesionGO:0016337290.038
developmental growthGO:00485891660.038
entrainment of circadian clock by photoperiodGO:004315310.038
digestive tract developmentGO:00485652650.038
biosynthetic processGO:00090582940.037
phosphate containing compound metabolic processGO:00067961080.037
epithelial cell developmentGO:0002064420.037
muscle cell differentiationGO:00426921390.037
cellular ion homeostasisGO:0006873170.037
Zebrafish
calcium mediated signalingGO:001972220.037
intracellular signal transductionGO:0035556850.036
oxoacid metabolic processGO:0043436310.036
regulation of protein bindingGO:004339330.036
regulation of cellular macromolecule biosynthetic processGO:20001122220.036
muscle cell developmentGO:00550011150.035
multicellular organismal signalingGO:0035637220.035
organophosphate metabolic processGO:0019637370.035
neuroblast proliferationGO:000740520.035
nuclear transportGO:005116940.035
regulation of cell cell adhesionGO:0022407130.035
chordate embryonic developmentGO:00430092710.034
cellular protein metabolic processGO:00442671290.033
tube morphogenesisGO:00352393490.033
establishment of localizationGO:00512342440.033
sleepGO:003043110.033
protein complex subunit organizationGO:0071822460.033
ion homeostasisGO:0050801410.033
Zebrafish
regulation of catalytic activityGO:0050790550.032
regulation of bindingGO:005109830.032
blood vessel morphogenesisGO:00485142160.032
embryonic heart tube developmentGO:00350501330.032
organic cyclic compound metabolic processGO:19013603010.032
nucleic acid templated transcriptionGO:00976591810.031
rna biosynthetic processGO:00327741810.031
regulation of smoothened signaling pathwayGO:0008589180.031
cellular macromolecule biosynthetic processGO:00346452240.030
cellular divalent inorganic cation homeostasisGO:0072503130.030
Zebrafish
action potentialGO:0001508190.029
vasculature developmentGO:00019442780.029
embryo development ending in birth or egg hatchingGO:00097922710.029
multicellular organism growthGO:003526440.029
chondrocyte intercalation involved in growth plate cartilage morphogenesisGO:000342810.028
cell migration involved in heart developmentGO:0060973220.028
regulation of protein transportGO:005122330.028
camera type eye photoreceptor cell differentiationGO:0060219190.028
biological adhesionGO:0022610400.028
ribose phosphate biosynthetic processGO:0046390200.028
amine metabolic processGO:000930820.028
positive regulation of signalingGO:0023056560.028
camera type eye developmentGO:00430102220.027
camera type eye morphogenesisGO:00485931080.027
cell proliferationGO:0008283800.027
cellular ketone metabolic processGO:0042180110.027
regulation of protein metabolic processGO:0051246560.027
actin filament based processGO:0030029640.026
tissue homeostasisGO:0001894250.026
positive regulation of guanylate cyclase activityGO:003128460.026
regulation of behaviorGO:0050795240.026
primary amino compound biosynthetic processGO:190116210.025
somite developmentGO:0061053960.025
retina morphogenesis in camera type eyeGO:0060042790.025
purine ribonucleotide metabolic processGO:0009150270.025
regulation of cell differentiationGO:00455951420.025
digestive system developmentGO:00551232890.025
brain developmentGO:00074202930.025
regulation of multicellular organismal developmentGO:20000262230.025
nucleoside phosphate metabolic processGO:0006753280.024
ribose phosphate metabolic processGO:0019693270.024
transcription from rna polymerase ii promoterGO:0006366800.024
regulation of circadian rhythmGO:004275240.024
regulation of multicellular organism growthGO:004001440.024
regulation of rna metabolic processGO:00512522240.024
positive regulation of catalytic activityGO:0043085250.024
carbohydrate derivative biosynthetic processGO:1901137430.024
protein modification processGO:00362111000.024
muscle organ developmentGO:00075171010.024
positive regulation of purine nucleotide metabolic processGO:190054490.023
carboxylic acid metabolic processGO:0019752220.023
ph reductionGO:004585110.023
apical junction assemblyGO:004329710.023
locomotionGO:00400113130.023
regulation of rna biosynthetic processGO:20011412130.022
single organism biosynthetic processGO:0044711710.022
cell cell adhesion mediated by cadherinGO:004433150.022
single organism localizationGO:19025782250.022
cytoskeleton organizationGO:0007010960.022
ion transportGO:00068111140.022
regulation of phosphate metabolic processGO:0019220430.022
striated muscle cell differentiationGO:00511461290.022
regulation of cytoplasmic transportGO:190364940.022
regulation of establishment of protein localizationGO:007020140.022
organic acid metabolic processGO:0006082310.022
smoothened signaling pathwayGO:0007224300.021
rhombomere 5 developmentGO:002157140.021
nucleotide biosynthetic processGO:0009165210.021
organelle assemblyGO:00709251100.021
cellular response to oxygen levelsGO:007145310.021
cellular response to organic substanceGO:00713101050.021
regulation of homeostatic processGO:003284490.021
Zebrafish
positive regulation of cgmp biosynthetic processGO:003082860.020
peptidyl lysine methylationGO:001802230.020
regulation of cellular amine metabolic processGO:003323800.020
cell cell signalingGO:0007267520.020
regulation of carbohydrate metabolic processGO:000610940.020
regulation of cellular ketone metabolic processGO:001056570.020
cellular homeostasisGO:0019725260.020
Zebrafish
regulation of intracellular protein transportGO:003315730.019
single organism behaviorGO:0044708240.019
cellular response to oxygen containing compoundGO:1901701200.019
macromolecule biosynthetic processGO:00090592270.019
positive regulation of cellular biosynthetic processGO:0031328680.018
inner ear developmentGO:00488391260.018
transcription dna templatedGO:00063511810.018
hormone secretionGO:004687920.018
regulation of phGO:000688530.018
positive regulation of response to stimulusGO:0048584800.018
negative regulation of kinase activityGO:003367340.018
developmental growth involved in morphogenesisGO:0060560860.018
regulation of metal ion transportGO:001095940.018
posterior lateral line developmentGO:0048916380.017
negative regulation of defense responseGO:003134820.017
carbohydrate homeostasisGO:003350010.017
photoreceptor cell developmentGO:0042461400.017
cilium organizationGO:0044782710.017
cortical cytoskeleton organizationGO:003086510.017
sensory perception of mechanical stimulusGO:0050954160.017
regulation of extrinsic apoptotic signaling pathwayGO:200123630.017
light adaptionGO:003636710.017
establishment of endothelial barrierGO:006102830.017
regulation of neurological system processGO:003164420.017
positive regulation of cyclase activityGO:003128160.016
microtubule based processGO:0007017600.016
cellular response to abiotic stimulusGO:007121440.016
Zebrafish
regulation of nucleotide biosynthetic processGO:0030808150.016
myofibril assemblyGO:0030239480.016
regulation of developmental processGO:00507932470.016
cell cycle processGO:0022402530.016
Human
regulation of transcription dna templatedGO:00063552130.016
membrane invaginationGO:001032410.016
response to hypoxiaGO:0001666250.015
regulation of cellular phGO:003064110.015
glial cell developmentGO:0021782200.015
regulation of macromolecule biosynthetic processGO:00105562250.015
hindbrain developmentGO:0030902910.015
positive regulation of cellular component biogenesisGO:004408930.015
gastrulation with mouth forming secondGO:0001702440.015
asymmetric protein localizationGO:000810560.015
regulation of ion transmembrane transporter activityGO:003241220.015
heart loopingGO:0001947940.015
multi organism processGO:00517041340.015
cell deathGO:00082191210.015
regulation of skeletal muscle tissue developmentGO:004864140.015
neurotransmitter secretionGO:000726920.015
regulation of protein complex assemblyGO:004325430.015
cellular response to decreased oxygen levelsGO:003629410.015
ion transmembrane transportGO:0034220910.015
regulation of lipid catabolic processGO:005099420.014
striated muscle tissue developmentGO:00147061100.014
regulation of phospholipase c activityGO:190027410.014
neurotransmitter transportGO:000683620.014
anatomical structure homeostasisGO:0060249360.014
positive regulation of transcription dna templatedGO:0045893570.014
hormone transportGO:000991420.014
rna metabolic processGO:00160702190.014
positive regulation of catabolic processGO:000989640.014
embryonic hemopoiesisGO:0035162530.014
developmental programmed cell deathGO:001062340.014
microtubule cytoskeleton organizationGO:0000226330.014
cellular protein catabolic processGO:004425740.014
neuron differentiationGO:00301823530.014
response to temperature stimulusGO:0009266150.014
positive regulation of camp metabolic processGO:003081620.014
defense responseGO:0006952470.014
embryonic organ developmentGO:00485683810.014
spermatid developmentGO:000728620.014
sensory system developmentGO:0048880760.013
regulation of phosphorus metabolic processGO:0051174430.013
ear developmentGO:00435831270.013
response to alkaloidGO:004327920.013
establishment of organelle localizationGO:0051656450.013
macromolecule localizationGO:0033036540.013
transmembrane receptor protein tyrosine kinase signaling pathwayGO:0007169420.013
regulation of cell migrationGO:0030334400.013
cellular response to molecule of bacterial originGO:007121930.013
adult behaviorGO:003053420.013
regulation of retinal cell programmed cell deathGO:004666820.013
positive regulation of gene expressionGO:0010628710.013
positive regulation of muscle organ developmentGO:004863610.013
liver developmentGO:0001889960.012
locomotor rhythmGO:004547530.012
regulation of nucleic acid templated transcriptionGO:19035062130.012
regulation of cellular component organizationGO:0051128860.012
response to endogenous stimulusGO:0009719830.012
establishment of localization in cellGO:0051649770.012
regulation of ion transportGO:0043269220.012
regulation of transmembrane transporter activityGO:002289820.012
positive regulation of inflammatory responseGO:005072910.012
response to nicotineGO:003509420.012
striated muscle cell developmentGO:00550021080.012
positive regulation of molecular functionGO:0044093330.012
regulation of cellular component movementGO:0051270550.012
reproductionGO:0000003400.012
ribonucleotide metabolic processGO:0009259270.012
negative regulation of protein phosphorylationGO:000193340.012
cellular protein modification processGO:00064641000.012
dorsal ventral pattern formationGO:00099531250.012
retinal cell programmed cell deathGO:004666620.011
negative regulation of macromolecule metabolic processGO:0010605760.011
actin filament organizationGO:0007015150.011
regulation of peptidyl tyrosine phosphorylationGO:005073010.011
single organism transportGO:00447652060.011
peptide transportGO:001583310.011
chemosensory behaviorGO:000763510.011
cell morphogenesisGO:00009022890.011
cell projection organizationGO:00300302840.011
cortical actin cytoskeleton organizationGO:003086610.011
positive regulation of cytoskeleton organizationGO:005149530.011
serotonin metabolic processGO:004242810.011
regulation of nucleoside metabolic processGO:000911820.011
modification dependent protein catabolic processGO:001994130.011
regulation of cellular amino acid metabolic processGO:000652100.011
regulation of chemotaxisGO:0050920180.011
cognitionGO:005089010.011
negative regulation of signal transductionGO:0009968940.011
cellular amino acid metabolic processGO:000652070.011
protein polymerizationGO:005125840.011
negative regulation of cellular macromolecule biosynthetic processGO:2000113480.011
phosphorylationGO:0016310690.011
cellular response to external stimulusGO:007149620.010
detection of stimulus involved in sensory perceptionGO:0050906210.010
single organism cellular localizationGO:1902580460.010
rho protein signal transductionGO:000726650.010
negative regulation of protein kinase activityGO:000646940.010
positive regulation of rna biosynthetic processGO:1902680570.010
organic substance transportGO:0071702580.010
response to decreased oxygen levelsGO:0036293250.010
regulation of cell substrate adhesionGO:001081010.010
positive regulation of cellular catabolic processGO:003133130.010
positive regulation of secretionGO:005104710.010
steroid hormone mediated signaling pathwayGO:004340190.010
positive regulation of camp biosynthetic processGO:003081920.010

opn1lw1 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
nervous system diseaseDOID:86300.484
Human
disease of anatomical entityDOID:700.484
Human
sensory system diseaseDOID:005015500.385
Human
eye and adnexa diseaseDOID:149200.385
Human
eye diseaseDOID:561400.385
Human
retinal diseaseDOID:567900.154
Human
retinal degenerationDOID:846600.082
retinitis pigmentosaDOID:1058400.045
bone diseaseDOID:008000100.011
connective tissue diseaseDOID:6500.011
musculoskeletal system diseaseDOID:1700.011
bone development diseaseDOID:008000600.011
osteochondrodysplasiaDOID:225600.011