Danio rerio

13 known processes

valopb

vertebrate ancient long opsin b

(Aliases: bZ1C10.4,si:rp71-1c10.4,valop)

valopb biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
nucleobase containing compound metabolic processGO:00061392740.476
signal transductionGO:00071654550.394
response to external stimulusGO:00096052640.314
Zebrafish
generation of neuronsGO:00486993850.269
nitrogen compound metabolic processGO:00068073190.267
ameboidal type cell migrationGO:00016671430.222
heterocycle metabolic processGO:00464832900.219
rna biosynthetic processGO:00327741810.206
regulation of metabolic processGO:00192223590.201
biosynthetic processGO:00090582940.194
maintenance of locationGO:005123540.193
Zebrafish
cell surface receptor signaling pathwayGO:00071663250.189
Zebrafish
single organism localizationGO:19025782250.171
organic substance biosynthetic processGO:19015762890.170
cellular aromatic compound metabolic processGO:00067252950.157
aromatic compound biosynthetic processGO:00194382170.150
sequestering of metal ionGO:005123830.149
Zebrafish
anion transportGO:0006820380.147
cellular nitrogen compound metabolic processGO:00346412900.143
nucleobase containing compound biosynthetic processGO:00346542050.130
cell morphogenesisGO:00009022890.128
negative regulation of sequestering of calcium ionGO:005128340.128
Zebrafish
organic cyclic compound metabolic processGO:19013603010.126
regulation of cellular macromolecule biosynthetic processGO:20001122220.124
heterocycle biosynthetic processGO:00181302150.124
nucleic acid metabolic processGO:00903042440.115
cellular biosynthetic processGO:00442492860.113
ion transportGO:00068111140.112
circadian sleep wake cycle processGO:002241020.111
regulation of biosynthetic processGO:00098892500.106
establishment of protein localization to organelleGO:007259440.103
regulation of macromolecule metabolic processGO:00602553170.103
macromolecule biosynthetic processGO:00090592270.102
regulation of metal ion transportGO:001095940.101
nucleocytoplasmic transportGO:000691340.099
brain developmentGO:00074202930.098
cell migrationGO:00164772370.097
regulation of cellular metabolic processGO:00313233200.091
regulation of signalingGO:00230512350.089
g protein coupled receptor signaling pathwayGO:0007186740.088
Zebrafish
cellular macromolecule metabolic processGO:00442603910.088
chemotaxisGO:00069351040.087
regulation of cytoplasmic transportGO:190364940.087
phospholipase c activating g protein coupled receptor signaling pathwayGO:000720020.086
sleepGO:003043110.086
regulation of primary metabolic processGO:00800903110.085
regulation of cellular biosynthetic processGO:00313262450.083
regulation of cell communicationGO:00106462320.081
regulation of nucleic acid templated transcriptionGO:19035062130.079
nuclear transportGO:005116940.079
nucleic acid templated transcriptionGO:00976591810.079
regulation of transcription dna templatedGO:00063552130.079
regulation of glucose importGO:004632410.078
system processGO:00030081850.078
negative regulation of biological processGO:00485193040.076
Zebrafish
cellular macromolecule biosynthetic processGO:00346452240.073
regulation of gene expressionGO:00104682650.073
organic substance transportGO:0071702580.071
monoamine transportGO:001584410.071
response to drugGO:004249330.070
actin filament based processGO:0030029640.070
ribonucleotide metabolic processGO:0009259270.069
axon guidanceGO:0007411860.069
ribonucleotide biosynthetic processGO:0009260200.068
blood vessel developmentGO:00015682460.067
behaviorGO:0007610740.066
cellular amine metabolic processGO:004410620.066
gene expressionGO:00104672520.065
locomotionGO:00400113130.063
retina development in camera type eyeGO:00600411460.063
regulation of macromolecule biosynthetic processGO:00105562250.063
protein localization to nucleusGO:003450430.063
regulation of biological qualityGO:00650082630.063
Zebrafish
rna metabolic processGO:00160702190.062
muscle structure developmentGO:00610611960.062
regulation of reproductive processGO:200024140.061
regulation of postsynaptic membrane potentialGO:006007810.060
regulation of establishment of protein localizationGO:007020140.059
adult behaviorGO:003053420.058
vasculature developmentGO:00019442780.057
cation transportGO:0006812810.057
response to abiotic stimulusGO:00096281220.057
Zebrafish
negative regulation of cellular processGO:00485232830.056
Zebrafish
phototransductionGO:000760220.056
Zebrafish
regulation of nucleocytoplasmic transportGO:004682220.056
response to nutrientGO:000758430.055
nucleotide biosynthetic processGO:0009165210.055
regulation of protein transportGO:005122330.055
positive regulation of transportGO:005105020.055
regulation of nitrogen compound metabolic processGO:00511712510.055
tube morphogenesisGO:00352393490.054
muscle organ developmentGO:00075171010.054
morphogenesis of an epitheliumGO:00020093330.054
locomotory behaviorGO:0007626340.054
regulation of intracellular protein transportGO:003315730.054
protein importGO:001703830.054
nuclear migrationGO:000709730.053
protein targeting to nucleusGO:004474430.053
head developmentGO:00603223030.052
programmed cell deathGO:00125011190.052
detection of visible lightGO:0009584120.052
Zebrafish
localization of cellGO:00516742440.052
adherens junction organizationGO:003433240.051
amine metabolic processGO:000930820.051
cell substrate adhesionGO:003158940.051
negative regulation of protein kinase activityGO:000646940.051
eye developmentGO:00016542770.051
cellular component morphogenesisGO:00329893360.051
neurotransmitter transportGO:000683620.051
neurotransmitter secretionGO:000726920.050
regulation of nucleobase containing compound metabolic processGO:00192192500.050
stem cell divisionGO:001714510.050
sequestering of calcium ionGO:005120830.050
Zebrafish
cellular response to oxygen levelsGO:007145310.050
transcription dna templatedGO:00063511810.049
larval developmentGO:000216420.049
nitrogen compound transportGO:0071705230.049
chemosensory behaviorGO:000763510.048
regulation of glucose transportGO:001082710.048
single organism transportGO:00447652060.047
cellular response to hypoxiaGO:007145610.047
phagocytosisGO:000690930.047
neuron differentiationGO:00301823530.046
protein import into nucleusGO:000660630.046
response to chemicalGO:00422213200.046
response to stressGO:00069502630.046
enzyme linked receptor protein signaling pathwayGO:00071671060.046
single organism behaviorGO:0044708240.046
stem cell proliferationGO:007208940.046
modification dependent macromolecule catabolic processGO:004363230.044
synaptic transmissionGO:0007268350.044
purine containing compound metabolic processGO:0072521290.043
cellular nitrogen compound biosynthetic processGO:00442712180.043
positive regulation of cytosolic calcium ion concentrationGO:000720440.043
response to glucocorticoidGO:005138410.043
transportGO:00068102200.042
phototransduction visible lightGO:000760320.042
Zebrafish
negative regulation of cytoplasmic transportGO:190365020.042
cytoskeleton organizationGO:0007010960.042
regulation of synaptic transmissionGO:005080440.041
regulation of protein localization to nucleusGO:190018020.040
gland developmentGO:00487321430.040
sensory organ developmentGO:00074233930.040
agingGO:000756820.040
lipid storageGO:001991510.040
guanosine containing compound catabolic processGO:190106920.039
regulation of cell projection assemblyGO:006049140.039
regulation of protein import into nucleusGO:004230620.039
single fertilizationGO:000733830.039
regulation of response to stimulusGO:00485832690.039
taxisGO:00423301090.038
blood vessel morphogenesisGO:00485142160.038
cellular response to decreased oxygen levelsGO:003629410.038
regulation of signal transductionGO:00099662250.038
organonitrogen compound metabolic processGO:1901564740.038
regulation of calcium ion transportGO:005192420.038
response to amineGO:001407510.037
circadian sleep wake cycleGO:004274520.037
regulation of membrane potentialGO:0042391230.037
positive regulation of biological processGO:00485182530.037
amino acid transportGO:000686520.037
transmission of nerve impulseGO:0019226190.037
purine ribonucleotide metabolic processGO:0009150270.036
negative regulation of biosynthetic processGO:0009890550.036
negative regulation of protein phosphorylationGO:000193340.036
gtp metabolic processGO:004603940.036
cellular response to radiationGO:007147840.036
Zebrafish
rhythmic processGO:0048511210.036
regulation of dna replicationGO:000627530.036
cell projection organizationGO:00300302840.035
calcium ion transport into cytosolGO:006040230.035
neurological system processGO:0050877620.035
apoptotic processGO:00069151160.035
autophagyGO:000691440.035
circadian sleep wake cycle sleepGO:005080210.034
regulation of protein targetingGO:190353320.034
glucose importGO:004632320.034
cell part morphogenesisGO:00329902460.033
neuron projection developmentGO:00311751800.033
ion transmembrane transportGO:0034220910.033
positive regulation of cellular processGO:00485222010.033
phosphate containing compound metabolic processGO:00067961080.033
regulation of sequestering of calcium ionGO:005128240.033
Zebrafish
erk1 and erk2 cascadeGO:007037140.033
central nervous system developmentGO:00074173870.032
positive regulation of glucose importGO:004632610.032
cellular response to extracellular stimulusGO:003166820.032
establishment of localizationGO:00512342440.032
regulation of phosphate metabolic processGO:0019220430.032
camera type eye developmentGO:00430102220.032
sensory organ morphogenesisGO:00905962000.032
negative regulation of dna replicationGO:000815620.032
gtp catabolic processGO:000618420.032
regulation of cytokine productionGO:000181730.032
cellular response to external stimulusGO:007149620.031
nucleoside phosphate biosynthetic processGO:1901293210.031
regulation of rna metabolic processGO:00512522240.031
negative regulation of dna metabolic processGO:005105340.030
response to corticosteroidGO:003196010.030
negative regulation of nitrogen compound metabolic processGO:0051172590.030
single organism organelle organizationGO:19025891990.030
entrainment of circadian clockGO:000964920.030
cell migration involved in gastrulationGO:0042074790.030
guanosine containing compound metabolic processGO:190106840.030
regulation of extrinsic apoptotic signaling pathwayGO:200123630.030
negative regulation of cell communicationGO:0010648960.029
cation transmembrane transportGO:0098655650.029
positive regulation of catabolic processGO:000989640.029
embryonic heart tube developmentGO:00350501330.029
negative regulation of nucleobase containing compound metabolic processGO:0045934590.029
purine ribonucleotide biosynthetic processGO:0009152200.029
regulation of synaptic growth at neuromuscular junctionGO:000858210.029
response to carbohydrateGO:000974330.028
regulation of rna biosynthetic processGO:20011412130.028
positive regulation of gene expressionGO:0010628710.028
angiogenesisGO:00015251580.028
neuron neuron synaptic transmissionGO:000727010.028
regulation of nucleotide catabolic processGO:003081120.028
carboxylic acid metabolic processGO:0019752220.028
small molecule metabolic processGO:0044281770.028
single organism metabolic processGO:00447102170.028
regulation of cellular amine metabolic processGO:003323800.028
organelle organizationGO:00069962270.027
dopamine metabolic processGO:004241720.027
positive regulation of cellular component biogenesisGO:004408930.027
regulation of neurotransmitter transportGO:005158810.027
cellular response to biotic stimulusGO:007121630.027
water homeostasisGO:003010440.027
response to estrogenGO:0043627270.027
regulation of camp metabolic processGO:003081490.026
regulation of erk1 and erk2 cascadeGO:007037240.026
negative regulation of epithelial cell proliferationGO:005068010.026
fertilizationGO:000956630.026
regulation of protein modification by small protein conjugation or removalGO:190332030.026
synaptic vesicle transportGO:004848910.026
regulation of bindingGO:005109830.026
negative regulation of protein localization to nucleusGO:190018120.026
response to glucoseGO:000974930.026
response to organic substanceGO:00100331530.025
single organism nuclear importGO:190259330.025
purine containing compound biosynthetic processGO:0072522200.025
calcium ion transportGO:0006816180.025
establishment of localization in cellGO:0051649770.025
positive regulation of nitrogen compound metabolic processGO:0051173690.025
cellular response to nutrient levelsGO:003166920.025
regulation of nucleoside metabolic processGO:000911820.025
positive regulation of protein complex assemblyGO:003133420.024
response to vitaminGO:003327330.024
peptide transportGO:001583310.024
neuroblast proliferationGO:000740520.024
response to ketoneGO:190165410.024
regulation of cell matrix adhesionGO:000195210.024
neuron migrationGO:0001764220.024
adherens junction maintenanceGO:003433420.024
positive regulation of cell cycleGO:004578730.024
nuclear importGO:005117030.024
regulation of synaptic plasticityGO:004816710.024
circadian rhythmGO:0007623190.024
immune system developmentGO:00025201910.024
regulation of neurotransmitter secretionGO:004692810.024
regulation of protein bindingGO:004339330.023
regulation of purine nucleotide catabolic processGO:003312120.023
axonogenesisGO:00074091520.023
organic cyclic compound biosynthetic processGO:19013622230.023
positive regulation of cytokine productionGO:000181920.023
cytosolic calcium ion transportGO:006040130.023
phosphorus metabolic processGO:00067931090.023
regulation of skeletal muscle tissue developmentGO:004864140.023
cellular protein modification processGO:00064641000.023
embryonic organ developmentGO:00485683810.023
regulation of phosphorus metabolic processGO:0051174430.023
negative regulation of cellular metabolic processGO:0031324770.023
glucose homeostasisGO:004259310.022
cognitionGO:005089010.022
negative regulation of protein complex assemblyGO:003133310.022
regulation of cellular carbohydrate metabolic processGO:001067540.022
regulation of developmental processGO:00507932470.022
positive regulation of secretion by cellGO:190353210.022
skeletal muscle organ developmentGO:0060538780.022
positive regulation of secretionGO:005104710.022
cellular response to lipopolysaccharideGO:007122230.022
regulation of transportGO:0051049450.022
regulation of protein complex assemblyGO:004325430.022
extrinsic apoptotic signaling pathwayGO:009719130.022
response to monosaccharideGO:003428430.021
cellular metal ion homeostasisGO:0006875160.021
Zebrafish
homeostatic processGO:00425921420.021
Zebrafish
negative regulation of cellular biosynthetic processGO:0031327550.021
positive regulation of rna biosynthetic processGO:1902680570.021
detection of abiotic stimulusGO:0009582240.021
Zebrafish
compound eye developmentGO:004874920.021
detection of external stimulusGO:0009581240.021
Zebrafish
embryo development ending in birth or egg hatchingGO:00097922710.021
regulation of cellular amino acid metabolic processGO:000652100.021
negative regulation of metabolic processGO:0009892860.020
cell projection morphogenesisGO:00488582440.020
glial cell proliferationGO:001400940.020
positive regulation of macromolecule metabolic processGO:0010604930.020
protein localizationGO:0008104400.020
regulation of molecular functionGO:0065009700.020
regulation of cell shapeGO:000836010.020
organophosphate metabolic processGO:0019637370.020
positive regulation of metabolic processGO:00098931080.020
cellular protein catabolic processGO:004425740.020
negative regulation of signalingGO:0023057960.020
proteasomal protein catabolic processGO:001049820.019
cellular carbohydrate metabolic processGO:004426240.019
response to biotic stimulusGO:0009607970.019
cellular response to light stimulusGO:007148240.019
Zebrafish
positive regulation of cellular catabolic processGO:003133130.019
response to alkaloidGO:004327920.019
photoreceptor cell developmentGO:0042461400.019
positive regulation of cell adhesionGO:004578510.019
regulation of cell substrate adhesionGO:001081010.019
positive regulation of camp biosynthetic processGO:003081920.019
regulation of synapse organizationGO:005080730.019
synaptic transmission glycinergicGO:006001210.019
response to organic cyclic compoundGO:0014070510.019
cell matrix adhesionGO:000716040.019
negative regulation of synapse assemblyGO:005196420.019
protein metabolic processGO:00195381830.019
regulation of cell activationGO:005086510.019
regulation of cellular ketone metabolic processGO:001056570.018
rna localizationGO:000640340.018
multicellular organism growthGO:003526440.018
negative regulation of response to stimulusGO:00485851040.018
positive regulation of erk1 and erk2 cascadeGO:007037420.018
digestive system developmentGO:00551232890.018
cell motilityGO:00488702440.018
intracellular signal transductionGO:0035556850.018
response to light stimulusGO:0009416460.018
Zebrafish
catecholamine metabolic processGO:000658420.018
phosphorylationGO:0016310690.018
metal ion homeostasisGO:0055065260.018
Zebrafish
cellular response to starvationGO:000926710.018
response to bacteriumGO:0009617580.018
negative regulation of map kinase activityGO:004340720.018
regulation of protein catabolic processGO:004217610.017
negative regulation of intracellular protein transportGO:009031730.017
neuron projection morphogenesisGO:00488121610.017
positive regulation of cell activationGO:005086710.017
response to hexoseGO:000974630.017
embryonic organ morphogenesisGO:00485622740.017
skeletal system morphogenesisGO:00487051020.017
organonitrogen compound biosynthetic processGO:1901566470.017
peptidyl serine modificationGO:001820920.017
regulation of reactive oxygen species metabolic processGO:200037720.017
response to oxygen containing compoundGO:1901700550.017
mitochondrion organizationGO:000700540.017
cell proliferationGO:0008283800.017
cellular component maintenanceGO:004395430.017
circadian behaviorGO:004851250.017
regulation of protein ubiquitinationGO:003139630.017
response to radiationGO:0009314510.017
Zebrafish
cell substrate junction assemblyGO:000704420.017
protein homooligomerizationGO:005126030.017
cell deathGO:00082191210.017
cell junction maintenanceGO:003433120.017
neural crest cell developmentGO:0014032620.017
regulation of gtpase activityGO:004308720.016
gastrulation with mouth forming secondGO:0001702440.016
cell morphogenesis involved in neuron differentiationGO:00486671630.016
post embryonic morphogenesisGO:000988640.016
cellular calcium ion homeostasisGO:0006874130.016
Zebrafish
proteasome mediated ubiquitin dependent protein catabolic processGO:004316120.016
positive regulation of nucleobase containing compound metabolic processGO:0045935690.016
modification dependent protein catabolic processGO:001994130.016
cellular amino acid metabolic processGO:000652070.016
regulation of ion transmembrane transporter activityGO:003241220.016
macromolecule modificationGO:00434121110.016
negative regulation of protein transportGO:005122430.015
formation of anatomical boundaryGO:0048859140.015
regulation of gtp catabolic processGO:003312420.015
cellular response to molecule of bacterial originGO:007121930.015
organic acid metabolic processGO:0006082310.015
nuclear exportGO:005116810.015
release of sequestered calcium ion into cytosolGO:005120930.015
immune system processGO:00023762410.015
tube closureGO:006060610.015
response to external biotic stimulusGO:0043207970.015
regulation of circadian rhythmGO:004275240.015
regulation of programmed cell deathGO:00430671010.015
locomotor rhythmGO:004547530.015
response to other organismGO:0051707970.015
meiotic nuclear divisionGO:000712640.015
carbohydrate derivative metabolic processGO:1901135610.015
negative regulation of kinase activityGO:003367340.015
regulation of carbohydrate metabolic processGO:000610940.015
cell cell signalingGO:0007267520.015
establishment of organelle localizationGO:0051656450.015
nucleus localizationGO:005164780.015
regulation of synapse assemblyGO:005196330.015
cellular component assemblyGO:00226071700.015
microtubule cytoskeleton organizationGO:0000226330.015
negative regulation of intracellular transportGO:003238730.014
regulation of inflammatory responseGO:005072720.014
somite developmentGO:0061053960.014
ubiquitin dependent protein catabolic processGO:000651130.014
hindbrain developmentGO:0030902910.014
skeletal muscle fiber developmentGO:0048741350.014
negative regulation of nucleocytoplasmic transportGO:004682320.014
hemopoiesisGO:00300971830.014
action potentialGO:0001508190.014
positive regulation of nucleoside metabolic processGO:004597910.014
cellular component biogenesisGO:00440851780.014
regulation of nucleotide biosynthetic processGO:0030808150.014
membrane hyperpolarizationGO:006008110.014
regulation of localizationGO:00328791040.014
Zebrafish
cellular response to drugGO:003569010.014
hormone transportGO:000991420.014
microtubule based processGO:0007017600.014
anion transmembrane transportGO:0098656120.014
cell morphogenesis involved in differentiationGO:00009041950.014
wnt signaling pathwayGO:0016055800.014
negative regulation of protein import into nucleusGO:004230820.014
cellular protein metabolic processGO:00442671290.014
urogenital system developmentGO:0001655970.014
hematopoietic or lymphoid organ developmentGO:00485341910.013
primary amino compound metabolic processGO:190116010.013
negative regulation of macromolecule metabolic processGO:0010605760.013
regulation of apoptotic processGO:0042981980.013
cellular component disassemblyGO:002241110.013
carbohydrate biosynthetic processGO:001605110.013
organelle fusionGO:004828430.013
oxoacid metabolic processGO:0043436310.013
detection of light stimulusGO:0009583120.013
Zebrafish
muscle cell developmentGO:00550011150.013
ovulation cycleGO:004269820.013
metal ion transportGO:0030001580.013
endosomal transportGO:001619720.013
regulation of proteolysis involved in cellular protein catabolic processGO:190305010.013
regulation of canonical wnt signaling pathwayGO:0060828340.013
alcohol biosynthetic processGO:004616520.013
organic anion transportGO:0015711150.013
transmembrane transportGO:00550851200.013
multicellular organismal response to stressGO:003355520.013
negative regulation of phosphate metabolic processGO:0045936130.013
regulation of blood circulationGO:1903522320.013
regulation of cellular response to oxidative stressGO:190040720.013
cyclic nucleotide biosynthetic processGO:0009190180.013
regulation of multicellular organismal processGO:00512392770.012
nitric oxide biosynthetic processGO:000680920.012
protein modification processGO:00362111000.012
digestive tract mesoderm developmentGO:000750210.012
maternal determination of anterior posterior axis embryoGO:000835840.012
regulation of ion transportGO:0043269220.012
positive regulation of cytoskeleton organizationGO:005149530.012
epithelial tube morphogenesisGO:00605621480.012
heart morphogenesisGO:00030071560.012
regulation of circadian sleep wake cycle sleepGO:004518710.012
establishment of nucleus localizationGO:004002370.012
cellular ketone metabolic processGO:0042180110.012
regulation of transporter activityGO:003240920.012
synaptic vesicle localizationGO:009747910.012
cellular response to chemical stimulusGO:00708871570.012
inorganic ion transmembrane transportGO:0098660570.012
positive regulation of cell divisionGO:005178120.012
purine nucleotide biosynthetic processGO:0006164200.012
antimicrobial humoral responseGO:001973020.012
ribose phosphate metabolic processGO:0019693270.012
positive regulation of immune effector processGO:000269930.012
anterior posterior pattern specificationGO:00099521520.012
negative regulation of muscle cell differentiationGO:005114810.012
catechol containing compound metabolic processGO:000971220.011
intracellular receptor signaling pathwayGO:0030522300.011
peptidyl serine phosphorylationGO:001810510.011
regulation of behaviorGO:0050795240.011
response to acid chemicalGO:0001101170.011
response to amino acidGO:004320020.011
monovalent inorganic cation transportGO:0015672420.011
cellular response to stressGO:0033554620.011
neuron developmentGO:00486662620.011
development of primary female sexual characteristicsGO:004654540.011
single organism intracellular transportGO:1902582250.011
regulation of cell differentiationGO:00455951420.011
cellular localizationGO:0051641970.011
muscle cell differentiationGO:00426921390.011
fat soluble vitamin metabolic processGO:000677540.011
l amino acid transportGO:001580710.011
intracellular estrogen receptor signaling pathwayGO:003052030.011
protein complex subunit organizationGO:0071822460.011
positive regulation of glucose transportGO:001082810.011
response to hypoxiaGO:0001666250.011
sensory perception of chemical stimulusGO:000760630.011
sensory perceptionGO:0007600390.011
negative regulation of multi organism processGO:004390130.011
lipid metabolic processGO:0006629520.011
regulation of wound healingGO:006104120.011
regulation of cellular protein catabolic processGO:190336210.011

valopb disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.198
nervous system diseaseDOID:86300.079
eye diseaseDOID:561400.013
sensory system diseaseDOID:005015500.013
eye and adnexa diseaseDOID:149200.013
central nervous system diseaseDOID:33100.011
brain diseaseDOID:93600.011