Danio rerio

58 known processes

plod3

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3

(Aliases: cb479,wu:fb72f10,im:6912725,MGC162023,diwanka,cb816)

plod3 biological process predictions


Filter by process size:
Biological processGO term IDProcess sizeProbabilityFunc Analog Org
neuron developmentGO:00486662620.981
axon developmentGO:00615641660.948
larval developmentGO:000216420.921
Worm
locomotionGO:00400113130.917
neuron differentiationGO:00301823530.836
embryonic organ developmentGO:00485683810.831
ion transmembrane transportGO:0034220910.759
inorganic ion transmembrane transportGO:0098660570.725
agingGO:000756820.720
cell projection organizationGO:00300302840.676
single organism transportGO:00447652060.585
Worm
response to chemicalGO:00422213200.547
chordate embryonic developmentGO:00430092710.509
Mouse
transportGO:00068102200.468
Worm
regulation of neurogenesisGO:0050767870.452
response to external stimulusGO:00096052640.451
neuron projection guidanceGO:0097485860.444
axonal defasciculationGO:000741420.364
cation transmembrane transportGO:0098655650.351
maintenance of locationGO:005123540.335
cell morphogenesis involved in differentiationGO:00009041950.333
neuron projection morphogenesisGO:00488121610.321
embryonic organ morphogenesisGO:00485622740.319
single organism localizationGO:19025782250.310
Worm
establishment of localizationGO:00512342440.310
Worm
nucleobase containing small molecule metabolic processGO:0055086320.305
Worm
response to abiotic stimulusGO:00096281220.296
cellular component morphogenesisGO:00329893360.288
notochord developmentGO:0030903540.278
cell part morphogenesisGO:00329902460.264
generation of neuronsGO:00486993850.247
regulation of cell differentiationGO:00455951420.244
response to organic cyclic compoundGO:0014070510.230
cell migrationGO:00164772370.228
neuron projection developmentGO:00311751800.218
vesicle mediated transportGO:0016192220.218
Worm
regulation of response to stimulusGO:00485832690.218
lipid storageGO:001991510.211
regulation of multicellular organismal processGO:00512392770.209
cell morphogenesis involved in neuron differentiationGO:00486671630.209
neurological system processGO:0050877620.207
myofibril assemblyGO:0030239480.197
negative regulation of cellular processGO:00485232830.194
response to organic substanceGO:00100331530.181
regulation of cell developmentGO:00602841000.180
stem cell developmentGO:0048864820.178
single organism metabolic processGO:00447102170.165
Mouse Worm
regulation of cellular component organizationGO:0051128860.164
localization of cellGO:00516742440.159
regulation of axonogenesisGO:0050770320.156
ameboidal type cell migrationGO:00016671430.156
regulation of cell morphogenesis involved in differentiationGO:0010769380.153
regulation of neuron differentiationGO:0045664560.137
biosynthetic processGO:00090582940.128
Worm
regulation of biological qualityGO:00650082630.128
Mouse
macromolecule biosynthetic processGO:00090592270.126
Worm
embryonic neurocranium morphogenesisGO:0048702150.123
organelle organizationGO:00069962270.120
response to stressGO:00069502630.117
positive regulation of cellular catabolic processGO:003133130.117
notochord formationGO:001402860.112
ion transportGO:00068111140.110
adult behaviorGO:003053420.107
tube morphogenesisGO:00352393490.104
macromolecule localizationGO:0033036540.101
Mouse
negative regulation of biological processGO:00485193040.096
regulation of cell communicationGO:00106462320.096
developmental growth involved in morphogenesisGO:0060560860.095
axon guidanceGO:0007411860.090
cation transportGO:0006812810.089
skin developmentGO:0043588540.088
Mouse
positive regulation of biological processGO:00485182530.087
system processGO:00030081850.087
Mouse
autophagyGO:000691440.086
muscle cell developmentGO:00550011150.086
nitrogen compound metabolic processGO:00068073190.084
Worm
behaviorGO:0007610740.083
regulation of heart contractionGO:0008016320.083
transmembrane transportGO:00550851200.081
cell morphogenesisGO:00009022890.080
cellular response to external stimulusGO:007149620.080
regulation of autophagyGO:001050630.079
morphogenesis of an epitheliumGO:00020093330.079
Mouse
hindbrain developmentGO:0030902910.078
central nervous system developmentGO:00074173870.077
regulation of transmembrane transportGO:0034762180.073
cellular response to organic cyclic compoundGO:0071407380.073
regulation of cell shapeGO:000836010.073
signal transductionGO:00071654550.072
organic substance biosynthetic processGO:19015762890.071
Worm
cognitionGO:005089010.071
neural crest cell differentiationGO:0014033720.070
visual perceptionGO:0007601170.069
chromosome organizationGO:0051276310.068
alcohol biosynthetic processGO:004616520.068
muscle organ developmentGO:00075171010.067
striated muscle cell developmentGO:00550021080.067
regulation of signalingGO:00230512350.067
muscle cell differentiationGO:00426921390.067
embryonic skeletal system developmentGO:0048706970.067
positive regulation of nitrogen compound metabolic processGO:0051173690.064
response to oxygen containing compoundGO:1901700550.064
er to golgi vesicle mediated transportGO:000688810.063
skeletal muscle organ developmentGO:0060538780.061
muscle structure developmentGO:00610611960.060
heterocycle metabolic processGO:00464832900.059
Worm
head developmentGO:00603223030.059
cellular component movementGO:00069283350.058
basement membrane assemblyGO:007083130.057
Mouse
ubiquitin dependent protein catabolic processGO:000651130.056
regulation of localizationGO:00328791040.056
protein alkylationGO:0008213130.056
regulation of anatomical structure morphogenesisGO:00226031300.055
cell motilityGO:00488702440.055
inorganic cation transmembrane transportGO:0098662500.053
regulation of metal ion transportGO:001095940.052
organic cyclic compound metabolic processGO:19013603010.052
Worm
nucleotide metabolic processGO:0009117280.051
Worm
epithelial cell proliferation involved in liver morphogenesisGO:007257520.048
positive regulation of catabolic processGO:000989640.046
modification dependent protein catabolic processGO:001994130.046
axonogenesisGO:00074091520.045
digestive tract morphogenesisGO:00485462310.044
cell substrate junction assemblyGO:000704420.044
gtp metabolic processGO:004603940.043
mesenchyme developmentGO:00604851270.043
negative regulation of chemotaxisGO:005092240.043
stem cell differentiationGO:00488631170.043
taxisGO:00423301090.042
single organism biosynthetic processGO:0044711710.042
Worm
inner ear developmentGO:00488391260.041
specification of symmetryGO:00097992040.041
cellular response to stressGO:0033554620.041
cellular localizationGO:0051641970.041
Worm
optic placode formationGO:000174340.040
chloride transmembrane transportGO:190247640.039
chemotaxisGO:00069351040.039
collagen biosynthetic processGO:003296420.039
Worm
negative regulation of transmembrane receptor protein serine threonine kinase signaling pathwayGO:0090101220.039
regulation of nervous system developmentGO:0051960900.039
nucleoside phosphate metabolic processGO:0006753280.039
Worm
carboxylic acid metabolic processGO:0019752220.038
regulation of cell projection assemblyGO:006049140.038
regulation of cell proliferation involved in heart morphogenesisGO:200013620.038
cellular component biogenesisGO:00440851780.037
Mouse
reflexGO:006000420.036
regulation of multicellular organismal developmentGO:20000262230.035
positive regulation of transportGO:005105020.035
single organism organelle organizationGO:19025891990.034
mesenchymal cell developmentGO:0014031780.034
collagen metabolic processGO:003296320.033
Worm
regulation of transmembrane receptor protein serine threonine kinase signaling pathwayGO:0090092500.033
anion transportGO:0006820380.033
cytoskeleton organizationGO:0007010960.033
positive regulation of cellular amine metabolic processGO:003324000.033
positive regulation of metabolic processGO:00098931080.033
establishment of localization in cellGO:0051649770.033
Worm
embryonic pattern specificationGO:0009880440.032
cell migration involved in heart developmentGO:0060973220.032
skeletal system developmentGO:00015011810.032
regulation of filopodium assemblyGO:005148920.031
embryo development ending in birth or egg hatchingGO:00097922710.031
Mouse Worm
cellular aromatic compound metabolic processGO:00067252950.031
Worm
embryonic viscerocranium morphogenesisGO:0048703520.031
gland developmentGO:00487321430.031
cellular response to extracellular stimulusGO:003166820.031
muscle tissue developmentGO:00605371100.031
actomyosin structure organizationGO:0031032530.030
long chain fatty acid metabolic processGO:000167610.030
immune system developmentGO:00025201910.030
organism emergence from protective structureGO:007168440.030
cell cycle processGO:0022402530.029
stem cell maintenanceGO:001982740.029
epithelial cell differentiationGO:00308551160.029
Mouse
organic acid metabolic processGO:0006082310.029
embryonic appendage morphogenesisGO:0035113300.028
negative regulation of signalingGO:0023057960.028
regulation of programmed cell deathGO:00430671010.028
regulation of apoptotic processGO:0042981980.028
proteolysis involved in cellular protein catabolic processGO:005160330.028
regenerationGO:0031099910.028
regulation of dendrite developmentGO:005077330.028
macromolecule modificationGO:00434121110.027
Worm
regulation of signal transductionGO:00099662250.027
regulation of developmental processGO:00507932470.027
negative regulation of response to stimulusGO:00485851040.026
sensory perception of light stimulusGO:0050953190.026
lipid metabolic processGO:0006629520.026
membrane repolarizationGO:008600920.025
wound healingGO:0042060900.025
vasculature developmentGO:00019442780.024
protein heterooligomerizationGO:005129110.024
motor neuron axon guidanceGO:0008045230.024
meiotic nuclear divisionGO:000712640.024
cell projection morphogenesisGO:00488582440.024
regulation of membrane potentialGO:0042391230.024
golgi organizationGO:000703010.024
establishment or maintenance of cell polarityGO:0007163290.024
g1 s transition of mitotic cell cycleGO:000008210.024
metal ion transportGO:0030001580.024
regulation of cell morphogenesisGO:0022604420.024
phosphorus metabolic processGO:00067931090.023
Worm
developmental cell growthGO:0048588520.023
cellular macromolecule localizationGO:0070727210.023
regulation of nucleobase containing compound metabolic processGO:00192192500.023
lipid homeostasisGO:005508830.023
neural crest cell developmentGO:0014032620.023
growthGO:00400071740.023
regulation of extent of cell growthGO:0061387290.023
synaptic transmissionGO:0007268350.023
cellular response to nutrient levelsGO:003166920.023
cellular protein metabolic processGO:00442671290.023
Worm
internal protein amino acid acetylationGO:000647520.023
embryonic cranial skeleton morphogenesisGO:0048701900.023
negative regulation of apoptotic processGO:0043066550.023
positive regulation of gtp catabolic processGO:003312610.022
oxoacid metabolic processGO:0043436310.022
cell deathGO:00082191210.022
cartilage development involved in endochondral bone morphogenesisGO:006035180.022
endochondral bone growthGO:000341620.022
digestive system developmentGO:00551232890.022
regulation of nucleotide catabolic processGO:003081120.022
neuron projection extensionGO:1990138450.021
mitotic cell cycleGO:0000278640.021
negative regulation of signal transductionGO:0009968940.021
digestive tract developmentGO:00485652650.021
positive regulation of purine nucleotide catabolic processGO:003312310.021
modification dependent macromolecule catabolic processGO:004363230.021
multicellular organism growthGO:003526440.021
cellular response to organic substanceGO:00713101050.020
regulation of neuron projection developmentGO:0010975400.020
regulation of synapse assemblyGO:005196330.020
synaptic transmission glycinergicGO:006001210.020
sensory perceptionGO:0007600390.020
inner ear morphogenesisGO:0042472630.019
response to endogenous stimulusGO:0009719830.019
response to nutrient levelsGO:0031667100.019
skeletal system morphogenesisGO:00487051020.019
apoptotic processGO:00069151160.019
hatchingGO:003518840.019
stem cell divisionGO:001714510.019
positive regulation of gtpase activityGO:004354710.019
cell surface receptor signaling pathwayGO:00071663250.018
calcium ion transmembrane transportGO:0070588130.018
regulation of phosphate metabolic processGO:0019220430.018
basement membrane organizationGO:007171150.018
Mouse
response to amino acidGO:004320020.018
positive regulation of multicellular organismal processGO:0051240520.018
protein metabolic processGO:00195381830.018
Worm
regulation of cell projection organizationGO:0031344440.017
ossificationGO:0001503230.017
cell proliferation involved in heart morphogenesisGO:006132320.017
primary neural tube formationGO:001402010.017
regulation of gtpase activityGO:004308720.017
epidermal cell differentiationGO:0009913360.017
phosphorylationGO:0016310690.017
positive regulation of response to stimulusGO:0048584800.017
reproductive processGO:0022414400.016
cellular protein catabolic processGO:004425740.016
cell proliferationGO:0008283800.016
skeletal muscle tissue developmentGO:0007519670.016
positive regulation of signalingGO:0023056560.016
anion transmembrane transportGO:0098656120.016
fin developmentGO:0033333770.016
Zebrafish
dna templated transcription elongationGO:000635430.015
cartilage condensationGO:000150230.015
positive regulation of molecular functionGO:0044093330.015
catabolic processGO:0009056320.015
regulation of epithelial cell proliferationGO:005067830.015
notochord cell differentiationGO:0060034180.015
cellular amino acid metabolic processGO:000652070.015
cellular nitrogen compound metabolic processGO:00346412900.015
Worm
organonitrogen compound metabolic processGO:1901564740.015
positive regulation of map kinase activityGO:004340630.014
response to external biotic stimulusGO:0043207970.014
carboxylic acid catabolic processGO:004639530.014
hemostasisGO:0007599130.014
regulation of nitrogen compound metabolic processGO:00511712510.014
receptor mediated endocytosisGO:000689860.014
Worm
growth plate cartilage developmentGO:000341720.014
regulation of biosynthetic processGO:00098892500.014
regulation of cell proliferationGO:0042127370.014
positive regulation of locomotionGO:0040017140.014
tube closureGO:006060610.014
phagocytosisGO:000690930.014
positive regulation of defense responseGO:003134990.014
cartilage morphogenesisGO:0060536130.014
alpha amino acid metabolic processGO:190160530.014
regulation of chromosome segregationGO:005198310.013
locomotory behaviorGO:0007626340.013
single organism reproductive processGO:0044702400.013
regulation of nucleoside metabolic processGO:000911820.013
organic substance transportGO:0071702580.013
carbohydrate derivative metabolic processGO:1901135610.013
Worm
blood circulationGO:0008015870.013
Mouse
apoptotic process involved in developmentGO:190274220.013
gastrulationGO:00073692080.013
lipid localizationGO:0010876110.013
intracellular transportGO:0046907320.013
protein destabilizationGO:003164810.013
regulation of cellular protein catabolic processGO:190336210.013
purine containing compound metabolic processGO:0072521290.013
inorganic anion transmembrane transportGO:0098661100.013
otolith developmentGO:0048840320.013
negative regulation of epithelial cell proliferationGO:005068010.013
developmental process involved in reproductionGO:0003006270.013
positive regulation of cellular processGO:00485222010.013
blood vessel developmentGO:00015682460.012
axon extensionGO:0048675450.012
vestibular receptor cell differentiationGO:006011430.012
proteasome mediated ubiquitin dependent protein catabolic processGO:004316120.012
regulation of cellular macromolecule biosynthetic processGO:20001122220.012
cell growthGO:0016049570.012
regulation of molecular functionGO:0065009700.012
positive regulation of macromolecule biosynthetic processGO:0010557590.012
fin morphogenesisGO:0033334530.012
Zebrafish
regulation of protein modification processGO:0031399290.012
somatic muscle developmentGO:000752540.012
positive regulation of synapse assemblyGO:005196510.011
cellular biosynthetic processGO:00442492860.011
Worm
positive regulation of nucleotide catabolic processGO:003081310.011
cell cycle g1 s phase transitionGO:004484310.011
regulation of body fluid levelsGO:0050878160.011
regulation of primary metabolic processGO:00800903110.011
programmed cell deathGO:00125011190.011
proteasomal protein catabolic processGO:001049820.011
negative regulation of cell communicationGO:0010648960.011
neural tube developmentGO:0021915620.011
Mouse
negative regulation of developmental processGO:0051093650.011
mesenchymal cell differentiationGO:0048762870.011
anatomical structure homeostasisGO:0060249360.011
positive regulation of peptidyl tyrosine phosphorylationGO:005073110.011
regulation of macromolecule metabolic processGO:00602553170.011
membrane invaginationGO:001032410.011
muscle cell migrationGO:001481240.011
response to steroid hormoneGO:0048545350.011
appendage developmentGO:0048736800.011
Zebrafish
chloride transportGO:000682180.010
regulation of transporter activityGO:003240920.010
post embryonic developmentGO:000979170.010
Worm
actin cytoskeleton organizationGO:0030036630.010
small molecule catabolic processGO:004428230.010
regulation of gtp catabolic processGO:003312420.010
regulation of ion transmembrane transporter activityGO:003241220.010
sprouting angiogenesisGO:0002040530.010
hepatocyte proliferationGO:007257420.010
positive regulation of gene expressionGO:0010628710.010
methylationGO:0032259220.010

plod3 disease predictions

Disease predictions are made from cross-annotation of human disease genes to the identified functional analogs in zebrafish and predicted with the zebrafish functional network.

DiseaseDO term IDSizeProbabilityFunc Analog Org
disease of anatomical entityDOID:700.020
disease of metabolismDOID:001466700.013
inherited metabolic disorderDOID:65500.013