IMP: Integrative Multi-species Prediction

Homo sapiens

27 genes annotated in human

rna modification

The covalent alteration of one or more nucleotides within an RNA molecule to produce an RNA molecule with a sequence that differs from that coded genetically.

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Known genes in the process in humanInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "rna modification"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "rna modification" (in gray)

Name	Description	Probability	Func Analog Organism
IKBKAP	inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein	0.977	Yeast
ELP3	elongation protein 3 homolog (S. cerevisiae)	0.972	Yeast
ELP4	elongation protein 4 homolog (S. cerevisiae)	0.766	Yeast
METTL1	methyltransferase like 1	0.674
ELP2	elongation protein 2 homolog (S. cerevisiae)	0.652	Yeast
NOP56	NOP56 ribonucleoprotein homolog (yeast)	0.481
WDR4	WD repeat domain 4	0.447
NOP58	NOP58 ribonucleoprotein homolog (yeast)	0.372
SMN1	survival of motor neuron 1, telomeric	0.113
TP53RK	TP53 regulating kinase	0.099
NAT10	N-acetyltransferase 10 (GCN5-related)	0.079
DDX24	DEAD (Asp-Glu-Ala-Asp) box polypeptide 24	0.076
FBL	fibrillarin	0.070	Yeast
EIF3G	eukaryotic translation initiation factor 3, subunit G	0.068
NAF1	nuclear assembly factor 1 homolog (S. cerevisiae)	0.062
MMS19	MMS19 nucleotide excision repair homolog (S. cerevisiae)	0.062
NOLC1	nucleolar and coiled-body phosphoprotein 1	0.058
RUVBL1	RuvB-like 1 (E. coli)	0.055
SP110	SP110 nuclear body protein	0.052
MKI67IP	MKI67 (FHA domain) interacting nucleolar phosphoprotein	0.049
STUB1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase	0.047
NIP7	nuclear import 7 homolog (S. cerevisiae)	0.046
GAR1	GAR1 ribonucleoprotein homolog (yeast)	0.043	Yeast
MYST2	MYST histone acetyltransferase 2	0.041
MOBKL1A	MOB1, Mps One Binder kinase activator-like 1A (yeast)	0.040
RRS1	RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	0.038
NVL	nuclear VCP-like	0.037
IMPDH2	IMP (inosine 5'-monophosphate) dehydrogenase 2	0.035
COIL	coilin	0.034
CEBPE	CCAAT/enhancer binding protein (C/EBP), epsilon	0.033
XRN2	5'-3' exoribonuclease 2	0.033
DDX56	DEAD (Asp-Glu-Ala-Asp) box polypeptide 56	0.031
CIRH1A	cirrhosis, autosomal recessive 1A (cirhin)	0.030
MDM4	Mdm4 p53 binding protein homolog (mouse)	0.029
WWP2	WW domain containing E3 ubiquitin protein ligase 2	0.029
GNL3	guanine nucleotide binding protein-like 3 (nucleolar)	0.027
FAM96B	family with sequence similarity 96, member B	0.026
PRMT1	protein arginine methyltransferase 1	0.025
LAGE3	L antigen family, member 3	0.025
NOP14	NOP14 nucleolar protein homolog (yeast)	0.025
UTP14A	UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	0.025
EIF3D	eukaryotic translation initiation factor 3, subunit D	0.025
WDYHV1	WDYHV motif containing 1	0.024
NUFIP1	nuclear fragile X mental retardation protein interacting protein 1	0.024
PSME1	proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)	0.023
PUS1	pseudouridylate synthase 1	0.023
SDAD1	SDA1 domain containing 1	0.022
DDX47	DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	0.022
DNAJA3	DnaJ (Hsp40) homolog, subfamily A, member 3	0.022
ANKRD28	ankyrin repeat domain 28	0.022
PIN1	peptidylprolyl cis/trans isomerase, NIMA-interacting 1	0.022
EIF2B1	eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa	0.021
POLR1C	polymerase (RNA) I polypeptide C, 30kDa	0.021
SLC25A38	solute carrier family 25, member 38	0.020
RSL1D1	ribosomal L1 domain containing 1	0.020
RCL1	RNA terminal phosphate cyclase-like 1	0.020
C19orf60	chromosome 19 open reading frame 60	0.020
LSM6	LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.020
LTV1	LTV1 homolog (S. cerevisiae)	0.020
DPH2	DPH2 homolog (S. cerevisiae)	0.020
ASCC2	activating signal cointegrator 1 complex subunit 2	0.020
GPN1	GPN-loop GTPase 1	0.020
NCL	nucleolin	0.019
DVL1	dishevelled, dsh homolog 1 (Drosophila)	0.019
DVL3	dishevelled, dsh homolog 3 (Drosophila)	0.018
DIEXF	digestive organ expansion factor homolog (zebrafish)	0.018
WDR74	WD repeat domain 74	0.018
CARHSP1	calcium regulated heat stable protein 1, 24kDa	0.018
CCDC86	coiled-coil domain containing 86	0.018
GTF3C2	general transcription factor IIIC, polypeptide 2, beta 110kDa	0.018
MTRR	5-methyltetrahydrofolate-homocysteine methyltransferase reductase	0.018
MRTO4	mRNA turnover 4 homolog (S. cerevisiae)	0.017
YDJC	YdjC homolog (bacterial)	0.017
CRELD2	cysteine-rich with EGF-like domains 2	0.017
PWP1	PWP1 homolog (S. cerevisiae)	0.017
XPO5	exportin 5	0.017
PRMT6	protein arginine methyltransferase 6	0.017
LIAS	lipoic acid synthetase	0.017
NUBP2	nucleotide binding protein 2 (MinD homolog, E. coli)	0.017	Yeast
OSGEPL1	O-sialoglycoprotein endopeptidase-like 1	0.016
C7orf64	chromosome 7 open reading frame 64	0.016
CSNK1E	casein kinase 1, epsilon	0.016	Yeast
WDR73	WD repeat domain 73	0.016
FASTKD2	FAST kinase domains 2	0.016
DCTPP1	dCTP pyrophosphatase 1	0.016
PPP6R3	protein phosphatase 6, regulatory subunit 3	0.016
AGAP1	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.015
PNO1	partner of NOB1 homolog (S. cerevisiae)	0.015
ZNF775	zinc finger protein 775	0.015
RRP15	ribosomal RNA processing 15 homolog (S. cerevisiae)	0.015
LARS	leucyl-tRNA synthetase	0.015
METTL17	methyltransferase like 17	0.015
NXT1	NTF2-like export factor 1	0.014
MAK16	MAK16 homolog (S. cerevisiae)	0.014
EIF3CL	eukaryotic translation initiation factor 3, subunit C-like	0.014
NOP2	NOP2 nucleolar protein homolog (yeast)	0.014	Yeast
OSTF1	osteoclast stimulating factor 1	0.014
PPP1R14A	protein phosphatase 1, regulatory (inhibitor) subunit 14A	0.014
FTSJD2	FtsJ methyltransferase domain containing 2	0.014
LENG1	leukocyte receptor cluster (LRC) member 1	0.014
IFI6	interferon, alpha-inducible protein 6	0.014
PUS7	pseudouridylate synthase 7 homolog (S. cerevisiae)	0.014
ANAPC5	anaphase promoting complex subunit 5	0.013
C10orf2	chromosome 10 open reading frame 2	0.013
DDX21	DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	0.013
HAX1	HCLS1 associated protein X-1	0.013
PFDN6	prefoldin subunit 6	0.013
CUTC	cutC copper transporter homolog (E. coli)	0.013
PPRC1	peroxisome proliferator-activated receptor gamma, coactivator-related 1	0.013
ODC1	ornithine decarboxylase 1	0.013
C7orf26	chromosome 7 open reading frame 26	0.013
APEX1	APEX nuclease (multifunctional DNA repair enzyme) 1	0.013
TSEN2	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	0.013
HARS	histidyl-tRNA synthetase	0.013
BBS10	Bardet-Biedl syndrome 10	0.013
NKIRAS2	NFKB inhibitor interacting Ras-like 2	0.013
FAM110A	family with sequence similarity 110, member A	0.012
USP10	ubiquitin specific peptidase 10	0.012
COASY	CoA synthase	0.012
FASTK	Fas-activated serine/threonine kinase	0.012
MCC	mutated in colorectal cancers	0.012
ALKBH2	alkB, alkylation repair homolog 2 (E. coli)	0.012
C7orf36	chromosome 7 open reading frame 36	0.012
WDR75	WD repeat domain 75	0.012
BZW2	basic leucine zipper and W2 domains 2	0.012
OCLN	occludin	0.012
TTC27	tetratricopeptide repeat domain 27	0.012
PCID2	PCI domain containing 2	0.012
EIF3I	eukaryotic translation initiation factor 3, subunit I	0.012
RLF	rearranged L-myc fusion	0.012
STK38L	serine/threonine kinase 38 like	0.012
GLRX3	glutaredoxin 3	0.012
MRPS27	mitochondrial ribosomal protein S27	0.012
IRF9	interferon regulatory factor 9	0.012
WDR43	WD repeat domain 43	0.012
IFRD2	interferon-related developmental regulator 2	0.012
PITPNB	phosphatidylinositol transfer protein, beta	0.012
ADAR	adenosine deaminase, RNA-specific	0.011
EIF3F	eukaryotic translation initiation factor 3, subunit F	0.011
PABPC4	poly(A) binding protein, cytoplasmic 4 (inducible form)	0.011
PPIH	peptidylprolyl isomerase H (cyclophilin H)	0.011
SLC5A6	solute carrier family 5 (sodium-dependent vitamin transporter), member 6	0.011
DDX10	DEAD (Asp-Glu-Ala-Asp) box polypeptide 10	0.011
PPP6R2	protein phosphatase 6, regulatory subunit 2	0.011
C11orf46	chromosome 11 open reading frame 46	0.011
EIF2AK2	eukaryotic translation initiation factor 2-alpha kinase 2	0.011
C12orf66	chromosome 12 open reading frame 66	0.011
HNRNPC	heterogeneous nuclear ribonucleoprotein C (C1/C2)	0.011
USP11	ubiquitin specific peptidase 11	0.011
SART3	squamous cell carcinoma antigen recognized by T cells 3	0.011
GTF3C1	general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.011
ZFP62	zinc finger protein 62 homolog (mouse)	0.011
PPAN	peter pan homolog (Drosophila)	0.011
SRFBP1	serum response factor binding protein 1	0.011
SETDB1	SET domain, bifurcated 1	0.011
TFCP2	transcription factor CP2	0.011
MIOS	missing oocyte, meiosis regulator, homolog (Drosophila)	0.011
CRAMP1L	Crm, cramped-like (Drosophila)	0.011
TAB3	TGF-beta activated kinase 1/MAP3K7 binding protein 3	0.011
PARP12	poly (ADP-ribose) polymerase family, member 12	0.010
ATIC	5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase	0.010
FAM195A	family with sequence similarity 195, member A	0.010
ASNS	asparagine synthetase (glutamine-hydrolyzing)	0.010
APOBEC1	apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	0.010	Human Rat
PRMT3	protein arginine methyltransferase 3	0.010
ANP32B	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	0.010
GTPBP6	GTP binding protein 6 (putative)	0.010
INTS2	integrator complex subunit 2	0.010
RNASEH1	ribonuclease H1	0.010