IMP: Integrative Multi-species Prediction

Homo sapiens

3 genes annotated in human

maturation of ssu rrna

Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule.

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Known genes in the process in humanInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "maturation of ssu rrna"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "maturation of ssu rrna" (in gray)

Name	Description	Probability	Func Analog Organism
RPS3	ribosomal protein S3	0.994
C10orf2	chromosome 10 open reading frame 2	0.970
RPS6	ribosomal protein S6	0.969	Yeast
MKI67IP	MKI67 (FHA domain) interacting nucleolar phosphoprotein	0.961
WDR3	WD repeat domain 3	0.954	Yeast
CIRH1A	cirrhosis, autosomal recessive 1A (cirhin)	0.937
MAK16	MAK16 homolog (S. cerevisiae)	0.936
RPS15A	ribosomal protein S15a	0.915
RPS4X	ribosomal protein S4, X-linked	0.902
DDX21	DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	0.888
GNL3	guanine nucleotide binding protein-like 3 (nucleolar)	0.883
RPS25	ribosomal protein S25	0.870
RPL18	ribosomal protein L18	0.870
RPS11	ribosomal protein S11	0.863	Yeast
EIF3D	eukaryotic translation initiation factor 3, subunit D	0.825
RPS14	ribosomal protein S14	0.818
WDR43	WD repeat domain 43	0.807	Yeast
NOLC1	nucleolar and coiled-body phosphoprotein 1	0.803
NOP2	NOP2 nucleolar protein homolog (yeast)	0.792
RPS24	ribosomal protein S24	0.768	Yeast
UTP14A	UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	0.751
RPS8	ribosomal protein S8	0.735	Yeast
RPS13	ribosomal protein S13	0.726	Yeast
NOP58	NOP58 ribonucleoprotein homolog (yeast)	0.717	Yeast
RPS5	ribosomal protein S5	0.715
RPS23	ribosomal protein S23	0.710	Yeast
CEBPZ	CCAAT/enhancer binding protein (C/EBP), zeta	0.657
RPL12	ribosomal protein L12	0.652
NOC3L	nucleolar complex associated 3 homolog (S. cerevisiae)	0.646
NOL11	nucleolar protein 11	0.641
RPS16	ribosomal protein S16	0.610	Yeast
RPS17	ribosomal protein S17	0.605
RPS18	ribosomal protein S18	0.589
HEATR1	HEAT repeat containing 1	0.569	Yeast Zebrafish
POLR1C	polymerase (RNA) I polypeptide C, 30kDa	0.567
FTSJ3	FtsJ homolog 3 (E. coli)	0.557
PAK1IP1	PAK1 interacting protein 1	0.530
WDR74	WD repeat domain 74	0.521
CLNS1A	chloride channel, nucleotide-sensitive, 1A	0.521
RPS28	ribosomal protein S28	0.506
NOP56	NOP56 ribonucleoprotein homolog (yeast)	0.441
RIOK1	RIO kinase 1 (yeast)	0.425
PUS7	pseudouridylate synthase 7 homolog (S. cerevisiae)	0.416
DIMT1L	DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)	0.386	Yeast
WDR75	WD repeat domain 75	0.381
LTV1	LTV1 homolog (S. cerevisiae)	0.378
RPL37A	ribosomal protein L37a	0.373
RPS10	ribosomal protein S10	0.341
TRMT1	TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	0.337
RPS12	ribosomal protein S12	0.328
TPT1	tumor protein, translationally-controlled 1	0.296
TGS1	trimethylguanosine synthase 1	0.293
RPF2	ribosome production factor 2 homolog (S. cerevisiae)	0.289
RPS21	ribosomal protein S21	0.288
RPLP1	ribosomal protein, large, P1	0.284
RPL27	ribosomal protein L27	0.259
URB2	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	0.256
DDX47	DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	0.254	Yeast
ESF1	ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)	0.247
RRP15	ribosomal RNA processing 15 homolog (S. cerevisiae)	0.247
RPL9	ribosomal protein L9	0.241
NUFIP1	nuclear fragile X mental retardation protein interacting protein 1	0.238
RPS19	ribosomal protein S19	0.234
RRS1	RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	0.227
DDX18	DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	0.226	Yeast
EIF5B	eukaryotic translation initiation factor 5B	0.226	Yeast
RPS29	ribosomal protein S29	0.222
PTRH2	peptidyl-tRNA hydrolase 2	0.214
MYBBP1A	MYB binding protein (P160) 1a	0.210
PITPNB	phosphatidylinositol transfer protein, beta	0.204
NOP14	NOP14 nucleolar protein homolog (yeast)	0.201	Yeast
RRP9	ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)	0.198
ZC3H15	zinc finger CCCH-type containing 15	0.197
NAT10	N-acetyltransferase 10 (GCN5-related)	0.195
UTP15	UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)	0.192	Yeast
BOP1	block of proliferation 1	0.188
CCDC86	coiled-coil domain containing 86	0.186
RPS20	ribosomal protein S20	0.182	Yeast
PNO1	partner of NOB1 homolog (S. cerevisiae)	0.175	Yeast
RPL19	ribosomal protein L19	0.168
ABCE1	ATP-binding cassette, sub-family E (OABP), member 1	0.162
RPS7	ribosomal protein S7	0.161
BYSL	bystin-like	0.159	Yeast Mouse
BMS1	BMS1 homolog, ribosome assembly protein (yeast)	0.155
HSPH1	heat shock 105kDa/110kDa protein 1	0.145
RPL30	ribosomal protein L30	0.145
WDR12	WD repeat domain 12	0.142
DPH2	DPH2 homolog (S. cerevisiae)	0.142
RPL21	ribosomal protein L21	0.141
PPAN	peter pan homolog (Drosophila)	0.138
RPS3A	ribosomal protein S3A	0.137	Yeast
RPL6	ribosomal protein L6	0.136
PPRC1	peroxisome proliferator-activated receptor gamma, coactivator-related 1	0.133
DIEXF	digestive organ expansion factor homolog (zebrafish)	0.133	Yeast
EIF3L	eukaryotic translation initiation factor 3, subunit L	0.131
DKC1	dyskeratosis congenita 1, dyskerin	0.131
RPLP2	ribosomal protein, large, P2	0.129
RPP40	ribonuclease P/MRP 40kDa subunit	0.121
KIAA0020	KIAA0020	0.118
RPL5	ribosomal protein L5	0.113
USP10	ubiquitin specific peptidase 10	0.112
WDR46	WD repeat domain 46	0.111
ZNF593	zinc finger protein 593	0.111
RPL24	ribosomal protein L24	0.107
PWP1	PWP1 homolog (S. cerevisiae)	0.105
RPS15	ribosomal protein S15	0.105
RPL7	ribosomal protein L7	0.104
BRIX1	BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)	0.103
RG9MTD1	RNA (guanine-9-) methyltransferase domain containing 1	0.102
RPSA	ribosomal protein SA	0.102	Yeast
RPLP0	ribosomal protein, large, P0	0.102
MINA	MYC induced nuclear antigen	0.102
IPO4	importin 4	0.101
RCL1	RNA terminal phosphate cyclase-like 1	0.098
RPS27A	ribosomal protein S27a	0.094
DNTTIP2	deoxynucleotidyltransferase, terminal, interacting protein 2	0.092
LSG1	large subunit GTPase 1 homolog (S. cerevisiae)	0.091
NSUN2	NOP2/Sun domain family, member 2	0.086
ECD	ecdysoneless homolog (Drosophila)	0.084
UTP20	UTP20, small subunit (SSU) processome component, homolog (yeast)	0.079
TBL3	transducin (beta)-like 3	0.079	Yeast
DDX10	DEAD (Asp-Glu-Ala-Asp) box polypeptide 10	0.076
DDX56	DEAD (Asp-Glu-Ala-Asp) box polypeptide 56	0.075
RIOK2	RIO kinase 2 (yeast)	0.075
LSM7	LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.075	Yeast
DHX30	DEAH (Asp-Glu-Ala-His) box polypeptide 30	0.074
GNL2	guanine nucleotide binding protein-like 2 (nucleolar)	0.074
NOC4L	nucleolar complex associated 4 homolog (S. cerevisiae)	0.074
RPL11	ribosomal protein L11	0.072
SHQ1	SHQ1 homolog (S. cerevisiae)	0.071
RBM28	RNA binding motif protein 28	0.071
G3BP1	GTPase activating protein (SH3 domain) binding protein 1	0.069
FASTKD2	FAST kinase domains 2	0.064
RPS2	ribosomal protein S2	0.064
TTC27	tetratricopeptide repeat domain 27	0.063
TWISTNB	TWIST neighbor	0.062
GTPBP4	GTP binding protein 4	0.062
UTP18	UTP18, small subunit (SSU) processome component, homolog (yeast)	0.061	Yeast
XPO5	exportin 5	0.061
PNPT1	polyribonucleotide nucleotidyltransferase 1	0.060
MCL1	myeloid cell leukemia sequence 1 (BCL2-related)	0.059
PRPF19	PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)	0.059
DDX54	DEAD (Asp-Glu-Ala-Asp) box polypeptide 54	0.058
EIF2S1	eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	0.058
LSM3	LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.058
PINX1	PIN2/TERF1 interacting, telomerase inhibitor 1	0.057
RPL27A	ribosomal protein L27a	0.057
TRMT6	tRNA methyltransferase 6 homolog (S. cerevisiae)	0.057
ZNF259	zinc finger protein 259	0.056
RPL36	ribosomal protein L36	0.053
NOL9	nucleolar protein 9	0.052
RPL17	ribosomal protein L17	0.049
DDX27	DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	0.048
ZC3H8	zinc finger CCCH-type containing 8	0.047
PUS3	pseudouridylate synthase 3	0.047
PPAT	phosphoribosyl pyrophosphate amidotransferase	0.047
RPL23A	ribosomal protein L23a	0.046
MTRR	5-methyltetrahydrofolate-homocysteine methyltransferase reductase	0.045
RPL14	ribosomal protein L14	0.044
SLC25A32	solute carrier family 25, member 32	0.043
NAA25	N(alpha)-acetyltransferase 25, NatB auxiliary subunit	0.043
OGFOD1	2-oxoglutarate and iron-dependent oxygenase domain containing 1	0.043
NUP35	nucleoporin 35kDa	0.042
MTPAP	mitochondrial poly(A) polymerase	0.041
RPS27	ribosomal protein S27	0.039
RPS26	ribosomal protein S26	0.039
RPL23	ribosomal protein L23	0.039
FBL	fibrillarin	0.039
XPO4	exportin 4	0.038
THOC5	THO complex 5	0.038
CWC22	CWC22 spliceosome-associated protein homolog (S. cerevisiae)	0.038
USP4	ubiquitin specific peptidase 4 (proto-oncogene)	0.038
UTP23	UTP23, small subunit (SSU) processome component, homolog (yeast)	0.038
MPHOSPH10	M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	0.037	Yeast
PDCD11	programmed cell death 11	0.036	Yeast
RPL34	ribosomal protein L34	0.036
NKRF	NFKB repressing factor	0.035
NUDCD1	NudC domain containing 1	0.035
TXLNG	taxilin gamma	0.035
TEX10	testis expressed 10	0.034
FAU	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	0.033
CCDC59	coiled-coil domain containing 59	0.033
RPL36A	ribosomal protein L36a	0.033
NOL8	nucleolar protein 8	0.032
RSL1D1	ribosomal L1 domain containing 1	0.032
RPL4	ribosomal protein L4	0.032
METTL1	methyltransferase like 1	0.032
POLR1B	polymerase (RNA) I polypeptide B, 128kDa	0.032
NAA15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	0.031
UTP6	UTP6, small subunit (SSU) processome component, homolog (yeast)	0.031
C12orf45	chromosome 12 open reading frame 45	0.030
SDAD1	SDA1 domain containing 1	0.030
RPL8	ribosomal protein L8	0.030
NAA38	N(alpha)-acetyltransferase 38, NatC auxiliary subunit	0.030
RPL39	ribosomal protein L39	0.029
YARS2	tyrosyl-tRNA synthetase 2, mitochondrial	0.029
RPL37	ribosomal protein L37	0.028
EIF4A1	eukaryotic translation initiation factor 4A1	0.027
NOL10	nucleolar protein 10	0.027
UBA52	ubiquitin A-52 residue ribosomal protein fusion product 1	0.027
SUPV3L1	suppressor of var1, 3-like 1 (S. cerevisiae)	0.026
EIF1AX	eukaryotic translation initiation factor 1A, X-linked	0.026
CUL4A	cullin 4A	0.026
LARP4	La ribonucleoprotein domain family, member 4	0.026
TRMU	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	0.026
BIN1	bridging integrator 1	0.025
GTF2H1	general transcription factor IIH, polypeptide 1, 62kDa	0.024
EIF3B	eukaryotic translation initiation factor 3, subunit B	0.023
SURF6	surfeit 6	0.023
DDX24	DEAD (Asp-Glu-Ala-Asp) box polypeptide 24	0.023
CCDC94	coiled-coil domain containing 94	0.023
UTP3	UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	0.023
TRNT1	tRNA nucleotidyl transferase, CCA-adding, 1	0.022
SRFBP1	serum response factor binding protein 1	0.022
NXT1	NTF2-like export factor 1	0.022
GSPT1	G1 to S phase transition 1	0.022
BCL2L11	BCL2-like 11 (apoptosis facilitator)	0.022
NOSIP	nitric oxide synthase interacting protein	0.022
CDK9	cyclin-dependent kinase 9	0.022
NOC2L	nucleolar complex associated 2 homolog (S. cerevisiae)	0.022
UMPS	uridine monophosphate synthetase	0.022
SART3	squamous cell carcinoma antigen recognized by T cells 3	0.021
AATF	apoptosis antagonizing transcription factor	0.021
CDK12	cyclin-dependent kinase 12	0.021
NR2E3	nuclear receptor subfamily 2, group E, member 3	0.021
NLE1	notchless homolog 1 (Drosophila)	0.021
IPO7	importin 7	0.021
RPL31	ribosomal protein L31	0.020
PIGW	phosphatidylinositol glycan anchor biosynthesis, class W	0.020
DHX33	DEAH (Asp-Glu-Ala-His) box polypeptide 33	0.020
GCN1L1	GCN1 general control of amino-acid synthesis 1-like 1 (yeast)	0.020
SEH1L	SEH1-like (S. cerevisiae)	0.020
RPL10A	ribosomal protein L10a	0.020
ZBTB24	zinc finger and BTB domain containing 24	0.019
YTHDF1	YTH domain family, member 1	0.019
POLR1E	polymerase (RNA) I polypeptide E, 53kDa	0.019
NARS	asparaginyl-tRNA synthetase	0.019
SELRC1	Sel1 repeat containing 1	0.019
NIP7	nuclear import 7 homolog (S. cerevisiae)	0.019
SMYD5	SMYD family member 5	0.019
C12orf29	chromosome 12 open reading frame 29	0.019
PABPC3	poly(A) binding protein, cytoplasmic 3	0.019
BZW2	basic leucine zipper and W2 domains 2	0.019
TTC4	tetratricopeptide repeat domain 4	0.018
GPN1	GPN-loop GTPase 1	0.018
NOP16	NOP16 nucleolar protein homolog (yeast)	0.018
IWS1	IWS1 homolog (S. cerevisiae)	0.018
MAT2A	methionine adenosyltransferase II, alpha	0.018
NAF1	nuclear assembly factor 1 homolog (S. cerevisiae)	0.018
PRPF4	PRP4 pre-mRNA processing factor 4 homolog (yeast)	0.017
RRP7A	ribosomal RNA processing 7 homolog A (S. cerevisiae)	0.017
FKBP4	FK506 binding protein 4, 59kDa	0.017
RNPS1	RNA binding protein S1, serine-rich domain	0.017
RARS	arginyl-tRNA synthetase	0.017
DDX31	DEAD (Asp-Glu-Ala-Asp) box polypeptide 31	0.017
IMP4	IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	0.016
MARS2	methionyl-tRNA synthetase 2, mitochondrial	0.016
CXorf26	chromosome X open reading frame 26	0.016
EED	embryonic ectoderm development	0.016
METTL8	methyltransferase like 8	0.016
PMM2	phosphomannomutase 2	0.016
PELP1	proline, glutamate and leucine rich protein 1	0.016
ATP13A1	ATPase type 13A1	0.016
GRWD1	glutamate-rich WD repeat containing 1	0.016
CHORDC1	cysteine and histidine-rich domain (CHORD) containing 1	0.016
SGTA	small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	0.015
PWP2	PWP2 periodic tryptophan protein homolog (yeast)	0.015
GLMN	glomulin, FKBP associated protein	0.015
RPL38	ribosomal protein L38	0.015
XPO6	exportin 6	0.015
ABCF2	ATP-binding cassette, sub-family F (GCN20), member 2	0.015
TNPO1	transportin 1	0.015
RPL28	ribosomal protein L28	0.015
UPF2	UPF2 regulator of nonsense transcripts homolog (yeast)	0.015
RPL35	ribosomal protein L35	0.015
NOL6	nucleolar protein family 6 (RNA-associated)	0.014
GNPNAT1	glucosamine-phosphate N-acetyltransferase 1	0.014
NDUFAF4	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	0.014
NUP98	nucleoporin 98kDa	0.014
E2F6	E2F transcription factor 6	0.014
MED1	mediator complex subunit 1	0.014
UBIAD1	UbiA prenyltransferase domain containing 1	0.014
LYAR	Ly1 antibody reactive homolog (mouse)	0.014
ODC1	ornithine decarboxylase 1	0.014
SLC5A6	solute carrier family 5 (sodium-dependent vitamin transporter), member 6	0.014
CCNJ	cyclin J	0.013
ACD	adrenocortical dysplasia homolog (mouse)	0.013
DDX52	DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	0.013	Yeast
NOM1	nucleolar protein with MIF4G domain 1	0.013
TSR1	TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)	0.013
CCDC47	coiled-coil domain containing 47	0.013
KPNA3	karyopherin alpha 3 (importin alpha 4)	0.013
THUMPD2	THUMP domain containing 2	0.013
USP36	ubiquitin specific peptidase 36	0.013
ZNF195	zinc finger protein 195	0.013
RRP12	ribosomal RNA processing 12 homolog (S. cerevisiae)	0.013
ALKBH2	alkB, alkylation repair homolog 2 (E. coli)	0.013
REXO4	REX4, RNA exonuclease 4 homolog (S. cerevisiae)	0.013
DHX37	DEAH (Asp-Glu-Ala-His) box polypeptide 37	0.012	Yeast
RRP1B	ribosomal RNA processing 1 homolog B (S. cerevisiae)	0.012
ZNHIT6	zinc finger, HIT-type containing 6	0.012
FAM60A	family with sequence similarity 60, member A	0.012
GAR1	GAR1 ribonucleoprotein homolog (yeast)	0.012
DDX55	DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	0.012
ISG20L2	interferon stimulated exonuclease gene 20kDa-like 2	0.012
MAX	MYC associated factor X	0.012
RPL7A	ribosomal protein L7a	0.012
FAM35A	family with sequence similarity 35, member A	0.012
SMCR7L	Smith-Magenis syndrome chromosome region, candidate 7-like	0.012
KRAS	v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	0.012
MIOS	missing oocyte, meiosis regulator, homolog (Drosophila)	0.012
KTI12	KTI12 homolog, chromatin associated (S. cerevisiae)	0.012
FAM98A	family with sequence similarity 98, member A	0.012
FMNL2	formin-like 2	0.012
C3orf26	chromosome 3 open reading frame 26	0.012
WDR36	WD repeat domain 36	0.011
RPL10L	ribosomal protein L10-like	0.011
C19orf24	chromosome 19 open reading frame 24	0.011
RPL7L1	ribosomal protein L7-like 1	0.011
PCID2	PCI domain containing 2	0.011
FBXW8	F-box and WD repeat domain containing 8	0.011
SUGP1	SURP and G patch domain containing 1	0.011
TMEM161A	transmembrane protein 161A	0.011
C8orf33	chromosome 8 open reading frame 33	0.011
DNAJA1	DnaJ (Hsp40) homolog, subfamily A, member 1	0.011
YDJC	YdjC homolog (bacterial)	0.011
FASN	fatty acid synthase	0.011
SF3A3	splicing factor 3a, subunit 3, 60kDa	0.011
WDR4	WD repeat domain 4	0.011
C3orf19	chromosome 3 open reading frame 19	0.011
C20orf4	chromosome 20 open reading frame 4	0.010
FARSB	phenylalanyl-tRNA synthetase, beta subunit	0.010
PUF60	poly-U binding splicing factor 60KDa	0.010
DNAJC2	DnaJ (Hsp40) homolog, subfamily C, member 2	0.010
RNF2	ring finger protein 2	0.010
TYW1	tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)	0.010
SACS	spastic ataxia of Charlevoix-Saguenay (sacsin)	0.010
PDE12	phosphodiesterase 12	0.010
CSDA	cold shock domain protein A	0.010