IMP: Integrative Multi-species Prediction

Mus musculus

26 genes annotated in mouse

regulation of rna stability

Any process that modulates the propensity of RNA molecules to degradation. Includes processes that both stabilize and destabilize RNAs.

Loading network...

In addition to gene-name show these genes:

Known genes in the process in mouseInclude functional analogs

Network Filters

Minimum relationship confidence:

Maximum number of genes:

Highlight known relationships in gold.

Graphical Options

Adjust edge length:

Adjust node size:

Fixed layout

Black background

Low confidence color:

Med confidence color:

High confidence color:

Hide the legend in the network

Save Options

Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "regulation of rna stability"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "regulation of rna stability" (in gray)

Name	Description	Probability	Func Analog Organism
Tlr4	toll-like receptor 4	0.564
Srsf1	serine/arginine-rich splicing factor 1	0.463
Hnrpdl	heterogeneous nuclear ribonucleoprotein D-like	0.249	Mouse
Syncrip	synaptotagmin binding, cytoplasmic RNA interacting protein	0.199	Human
Hnrnpa1	heterogeneous nuclear ribonucleoprotein A1	0.192	Mouse
Lyz2	lysozyme 2	0.191
Ccl2	chemokine (C-C motif) ligand 2	0.128
Fus	fusion, derived from t(12;16) malignant liposarcoma (human)	0.124
Sfpq	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)	0.116
Tnf	tumor necrosis factor	0.102
Set	SET nuclear oncogene	0.095
Tnfrsf1a	tumor necrosis factor receptor superfamily, member 1a	0.087
Hnrnpu	heterogeneous nuclear ribonucleoprotein U	0.082	Human
Ddx60	DEAD (Asp-Glu-Ala-Asp) box polypeptide 60	0.081
Hnrnpk	heterogeneous nuclear ribonucleoprotein K	0.075
Hnrnph1	heterogeneous nuclear ribonucleoprotein H1	0.073
Srsf2	serine/arginine-rich splicing factor 2	0.072
Hnrnpm	heterogeneous nuclear ribonucleoprotein M	0.071
Ncl	nucleolin	0.071
Cebpb	CCAAT/enhancer binding protein (C/EBP), beta	0.068
Elavl1	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	0.066
Neurl1a	neuralized homolog 1A (Drosophila)	0.063
Tardbp	TAR DNA binding protein	0.063	Human
Srsf6	serine/arginine-rich splicing factor 6	0.060
Stat3	signal transducer and activator of transcription 3	0.057
Hnrnpd	heterogeneous nuclear ribonucleoprotein D	0.057
Unc93b1	unc-93 homolog B1 (C. elegans)	0.054
Cd44	CD44 antigen	0.048
Prdm1	PR domain containing 1, with ZNF domain	0.046
Hmgb1	high mobility group box 1	0.043
Rc3h1	RING CCCH (C3H) domains 1	0.042
Junb	Jun-B oncogene	0.039
Pcbp1	poly(rC) binding protein 1	0.038
Igh	immunoglobulin heavy chain complex	0.038
Hnrnpa3	heterogeneous nuclear ribonucleoprotein A3	0.037	Mouse
Ddx21	DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	0.037
Mapk14	mitogen-activated protein kinase 14	0.037
Tcerg1	transcription elongation regulator 1 (CA150)	0.036
Hdac1	histone deacetylase 1	0.035
Traf2	TNF receptor-associated factor 2	0.035
Parp1	poly (ADP-ribose) polymerase family, member 1	0.035
2500003M10Rik	RIKEN cDNA 2500003M10 gene	0.035
Il4ra	interleukin 4 receptor, alpha	0.034
Khdrbs1	KH domain containing, RNA binding, signal transduction associated 1	0.034	Mouse
Rnps1	ribonucleic acid binding protein S1	0.032
Ticam1	toll-like receptor adaptor molecule 1	0.032
Ooep	oocyte expressed protein homolog (dog)	0.032
Dhx9	DEAH (Asp-Glu-Ala-His) box polypeptide 9	0.032	Human
Hnrnpab	heterogeneous nuclear ribonucleoprotein A/B	0.031	Mouse
Prmt1	protein arginine N-methyltransferase 1	0.030
Pik3cd	phosphatidylinositol 3-kinase catalytic delta polypeptide	0.030
Srsf3	serine/arginine-rich splicing factor 3	0.027
Pabpn1	poly(A) binding protein, nuclear 1	0.026
Ipo5	importin 5	0.026
Anp32e	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	0.026
Il1r1	interleukin 1 receptor, type I	0.026
Nucks1	nuclear casein kinase and cyclin-dependent kinase substrate 1	0.025
Tnfaip3	tumor necrosis factor, alpha-induced protein 3	0.025
Hnrnpa2b1	heterogeneous nuclear ribonucleoprotein A2/B1	0.025	Mouse
B230308N11Rik	RIKEN cDNA B230308N11 gene	0.024
Pycard	PYD and CARD domain containing	0.024
Bms1	BMS1 homolog, ribosome assembly protein (yeast)	0.024
Rnf111	ring finger 111	0.024
Pik3ap1	phosphoinositide-3-kinase adaptor protein 1	0.024
Kpnb1	karyopherin (importin) beta 1	0.023
Mcl1	myeloid cell leukemia sequence 1	0.022
Tnfsf11	tumor necrosis factor (ligand) superfamily, member 11	0.022
Cnot6	CCR4-NOT transcription complex, subunit 6	0.022	Mouse
Pthlh	parathyroid hormone-like peptide	0.022
Ewsr1	Ewing sarcoma breakpoint region 1	0.022
Tfdp1	transcription factor Dp 1	0.022
Ptgs2	prostaglandin-endoperoxide synthase 2	0.022
Tcl1	T-cell lymphoma breakpoint 1	0.021
2410004A20Rik	RIKEN cDNA 2410004A20 gene	0.021
Smad4	MAD homolog 4 (Drosophila)	0.020
Parp2	poly (ADP-ribose) polymerase family, member 2	0.020
Trim25	tripartite motif-containing 25	0.019
Ctps	cytidine 5'-triphosphate synthase	0.019
Birc3	baculoviral IAP repeat-containing 3	0.019
Ddx3x	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	0.019
Rara	retinoic acid receptor, alpha	0.019
Irf1	interferon regulatory factor 1	0.019
Phc2	polyhomeotic-like 2 (Drosophila)	0.019
Hnrnpa0	heterogeneous nuclear ribonucleoprotein A0	0.019
Rtf1	Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.019
G3bp1	Ras-GTPase-activating protein SH3-domain binding protein 1	0.018
Ret	ret proto-oncogene	0.018
Casp4	caspase 4, apoptosis-related cysteine peptidase	0.018
Map3k8	mitogen-activated protein kinase kinase kinase 8	0.018
Anp32b	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	0.018
Smad3	MAD homolog 3 (Drosophila)	0.018
Srsf7	serine/arginine-rich splicing factor 7	0.018
Tcf12	transcription factor 12	0.017
Lmnb1	lamin B1	0.017
Myd88	myeloid differentiation primary response gene 88	0.017	Human
Srsf9	serine/arginine-rich splicing factor 9	0.017
Il6st	interleukin 6 signal transducer	0.017
Prkdc	protein kinase, DNA activated, catalytic polypeptide	0.016
Casp1	caspase 1	0.016
Ripk1	receptor (TNFRSF)-interacting serine-threonine kinase 1	0.016
Hnrnpf	heterogeneous nuclear ribonucleoprotein F	0.016
Tgfb1	transforming growth factor, beta 1	0.016
Mx2	myxovirus (influenza virus) resistance 2	0.016
Socs3	suppressor of cytokine signaling 3	0.016
Foxf1a	forkhead box F1a	0.016
Hnrnpul2	heterogeneous nuclear ribonucleoprotein U-like 2	0.015
Ptp4a2	protein tyrosine phosphatase 4a2	0.015
Skp2	S-phase kinase-associated protein 2 (p45)	0.015
Trp53	transformation related protein 53	0.015
Caprin1	cell cycle associated protein 1	0.015
Rcor1	REST corepressor 1	0.015
Traf6	TNF receptor-associated factor 6	0.015
Hdgf	hepatoma-derived growth factor	0.015
Rbm12	RNA binding motif protein 12	0.015
Gnai2	guanine nucleotide binding protein (G protein), alpha inhibiting 2	0.015
Hmgb3	high mobility group box 3	0.014
Pbrm1	polybromo 1	0.014
Serbp1	serpine1 mRNA binding protein 1	0.014
Ptges3	prostaglandin E synthase 3 (cytosolic)	0.014
Il6	interleukin 6	0.014
Rc3h2	ring finger and CCCH-type zinc finger domains 2	0.014	Mouse
Socs1	suppressor of cytokine signaling 1	0.014
S1pr2	sphingosine-1-phosphate receptor 2	0.014
Prkcd	protein kinase C, delta	0.014
Ptma	prothymosin alpha	0.014
Irak4	interleukin-1 receptor-associated kinase 4	0.014
Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)	0.014
Naa11	N(alpha)-acetyltransferase 11, NatA catalytic subunit	0.014
Tdg	thymine DNA glycosylase	0.013
Gar1	GAR1 ribonucleoprotein homolog (yeast)	0.013
Rbbp6	retinoblastoma binding protein 6	0.013
Gata4	GATA binding protein 4	0.013
Cbfb	core binding factor beta	0.013
Lbr	lamin B receptor	0.013
Fut9	fucosyltransferase 9	0.013
Nono	non-POU-domain-containing, octamer binding protein	0.013
Gdf15	growth differentiation factor 15	0.013
Foxo4	forkhead box O4	0.013
Oasl1	2'-5' oligoadenylate synthetase-like 1	0.013
Relb	avian reticuloendotheliosis viral (v-rel) oncogene related B	0.013
Smad1	MAD homolog 1 (Drosophila)	0.013
Elavl2	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	0.013	Mouse
Muc5ac	mucin 5, subtypes A and C, tracheobronchial/gastric	0.013
Pnn	pinin	0.012
Luc7l3	LUC7-like 3 (S. cerevisiae)	0.012
Fgf10	fibroblast growth factor 10	0.012
Hnrnph3	heterogeneous nuclear ribonucleoprotein H3	0.012
Mybpc3	myosin binding protein C, cardiac	0.012
Casp2	caspase 2	0.012
Pik3ca	phosphatidylinositol 3-kinase, catalytic, alpha polypeptide	0.012
Htr1d	5-hydroxytryptamine (serotonin) receptor 1D	0.012
Rbmx	RNA binding motif protein, X chromosome	0.012
Hnrnpr	heterogeneous nuclear ribonucleoprotein R	0.012
Scaf11	SR-related CTD-associated factor 11	0.012
Ddx5	DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	0.012
Bend3	BEN domain containing 3	0.012
Tfrc	transferrin receptor	0.012
Kcnj5	potassium inwardly-rectifying channel, subfamily J, member 5	0.012
Rbm25	RNA binding motif protein 25	0.012
Batf3	basic leucine zipper transcription factor, ATF-like 3	0.012
Bak1	BCL2-antagonist/killer 1	0.012
Ung	uracil DNA glycosylase	0.012
Bcl3	B-cell leukemia/lymphoma 3	0.012
Zp2	zona pellucida glycoprotein 2	0.012
Nfkb2	nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	0.012
Syt1	synaptotagmin I	0.012
Arid2	AT rich interactive domain 2 (ARID, RFX-like)	0.012
Wdr77	WD repeat domain 77	0.011
Fcer1g	Fc receptor, IgE, high affinity I, gamma polypeptide	0.011
Gja1	gap junction protein, alpha 1	0.011
Mvp	major vault protein	0.011
Rimklb	ribosomal modification protein rimK-like family member B	0.011
Thoc4	THO complex 4	0.011
Gli1	GLI-Kruppel family member GLI1	0.011
Txnip	thioredoxin interacting protein	0.011
Srsf5	serine/arginine-rich splicing factor 5	0.011
Dis3	DIS3 mitotic control homolog (S. cerevisiae)	0.011
Dync1i1	dynein cytoplasmic 1 intermediate chain 1	0.011
Nlrp3	NLR family, pyrin domain containing 3	0.011	Mouse
Irgm1	immunity-related GTPase family M member 1	0.011
Cdk2ap1	CDK2 (cyclin-dependent kinase 2)-associated protein 1	0.011
Top2b	topoisomerase (DNA) II beta	0.011
2410002F23Rik	RIKEN cDNA 2410002F23 gene	0.011
Ptch2	patched homolog 2	0.011
Mapre1	microtubule-associated protein, RP/EB family, member 1	0.011
Nptx2	neuronal pentraxin 2	0.011
B230219D22Rik	RIKEN cDNA B230219D22 gene	0.011
Ltbr	lymphotoxin B receptor	0.011	Mouse
Adam17	a disintegrin and metallopeptidase domain 17	0.011
Pten	phosphatase and tensin homolog	0.011
Pabpc4	poly(A) binding protein, cytoplasmic 4	0.011
Wdr26	WD repeat domain 26	0.011
Ddx39b	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	0.011
Fos	FBJ osteosarcoma oncogene	0.011
Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	0.011
Rbmxrt	RNA binding motif protein, X chromosome retrogene	0.011
Hdac2	histone deacetylase 2	0.011
Ddx17	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	0.011
Eif4a1	eukaryotic translation initiation factor 4A1	0.011
Upf3b	UPF3 regulator of nonsense transcripts homolog B (yeast)	0.011
Errfi1	ERBB receptor feedback inhibitor 1	0.011
Map3k7	mitogen-activated protein kinase kinase kinase 7	0.010
Map3k1	mitogen-activated protein kinase kinase kinase 1	0.010
Etv2	ets variant gene 2	0.010
Oprk1	opioid receptor, kappa 1	0.010
Irak1	interleukin-1 receptor-associated kinase 1	0.010
Ctcf	CCCTC-binding factor	0.010
Cdkn2a	cyclin-dependent kinase inhibitor 2A	0.010
Cd2ap	CD2-associated protein	0.010
Phc1	polyhomeotic-like 1 (Drosophila)	0.010
Wnt2b	wingless related MMTV integration site 2b	0.010
Tapbp	TAP binding protein	0.010
Bcl6	B-cell leukemia/lymphoma 6	0.010
Mavs	mitochondrial antiviral signaling protein	0.010