IMP: Integrative Multi-species Prediction

Mus musculus

13 genes annotated in mouse

mrna transport

The directed movement of mRNA, messenger ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

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Known genes in the process in mouseInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "mrna transport"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "mrna transport" (in gray)

Name	Description	Probability	Func Analog Organism
Ywhae	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	0.567
Actl6a	actin-like 6A	0.545
Nup93	nucleoporin 93	0.541
Rbm25	RNA binding motif protein 25	0.404
Ssrp1	structure specific recognition protein 1	0.333
Larp7	La ribonucleoprotein domain family, member 7	0.293
Refbp2	RNA and export factor binding protein 2	0.280
Hnrnpu	heterogeneous nuclear ribonucleoprotein U	0.276
Kpnb1	karyopherin (importin) beta 1	0.218
Mcm4	minichromosome maintenance deficient 4 homolog (S. cerevisiae)	0.215
Nup155	nucleoporin 155	0.203
Lbr	lamin B receptor	0.199
Trim28	tripartite motif-containing 28	0.197
Tardbp	TAR DNA binding protein	0.192
Rbm14	RNA binding motif protein 14	0.189
Srsf3	serine/arginine-rich splicing factor 3	0.185
Topbp1	topoisomerase (DNA) II binding protein 1	0.171
Dnmt1	DNA methyltransferase (cytosine-5) 1	0.170
Set	SET nuclear oncogene	0.155
Suz12	suppressor of zeste 12 homolog (Drosophila)	0.148
Tfdp1	transcription factor Dp 1	0.147
Uba2	ubiquitin-like modifier activating enzyme 2	0.141
Rnps1	ribonucleic acid binding protein S1	0.139
Casp8ap2	caspase 8 associated protein 2	0.137
Ilf2	interleukin enhancer binding factor 2	0.134
Ppp4c	protein phosphatase 4, catalytic subunit	0.133
Nup107	nucleoporin 107	0.130	Human
A230046K03Rik	RIKEN cDNA A230046K03 gene	0.127
Elavl1	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	0.126
Cse1l	chromosome segregation 1-like (S. cerevisiae)	0.117
Ezh2	enhancer of zeste homolog 2 (Drosophila)	0.105
Anp32b	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	0.100
Parp2	poly (ADP-ribose) polymerase family, member 2	0.097
Ranbp1	RAN binding protein 1	0.094
Nono	non-POU-domain-containing, octamer binding protein	0.090
G3bp1	Ras-GTPase-activating protein SH3-domain binding protein 1	0.085
Tnpo3	transportin 3	0.085
Ipo9	importin 9	0.084
Eftud2	elongation factor Tu GTP binding domain containing 2	0.082
Ptges3	prostaglandin E synthase 3 (cytosolic)	0.078
B230308N11Rik	RIKEN cDNA B230308N11 gene	0.077
Rbbp4	retinoblastoma binding protein 4	0.072
Rbmxrt	RNA binding motif protein, X chromosome retrogene	0.070
Ctnnbl1	catenin, beta like 1	0.070
Mapk8ip3	mitogen-activated protein kinase 8 interacting protein 3	0.068
Srrt	serrate RNA effector molecule homolog (Arabidopsis)	0.068
Ube2n	ubiquitin-conjugating enzyme E2N	0.068
Rnf11	ring finger protein 11	0.065
Ddx3x	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	0.065
Sfpq	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)	0.063
Tgs1	trimethylguanosine synthase homolog (S. cerevisiae)	0.063
Luc7l3	LUC7-like 3 (S. cerevisiae)	0.062
Ctps	cytidine 5'-triphosphate synthase	0.061
Prmt1	protein arginine N-methyltransferase 1	0.061	Yeast
Mtf2	metal response element binding transcription factor 2	0.058
Tial1	Tia1 cytotoxic granule-associated RNA binding protein-like 1	0.057
Ppm1g	protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform	0.056
Sf3b3	splicing factor 3b, subunit 3	0.055
Pds5a	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	0.055
Ilf3	interleukin enhancer binding factor 3	0.054
Tdg	thymine DNA glycosylase	0.054
2500003M10Rik	RIKEN cDNA 2500003M10 gene	0.053
Snrnp40	small nuclear ribonucleoprotein 40 (U5)	0.052
Tax1bp1	Tax1 (human T-cell leukemia virus type I) binding protein 1	0.051
Parp1	poly (ADP-ribose) polymerase family, member 1	0.049
Cyld	cylindromatosis (turban tumor syndrome)	0.047
Exosc9	exosome component 9	0.047
Tex11	testis expressed gene 11	0.045
Elp2	elongation protein 2 homolog (S. cerevisiae)	0.044
Eif3a	eukaryotic translation initiation factor 3, subunit A	0.043
Ctcf	CCCTC-binding factor	0.043
Rcc2	regulator of chromosome condensation 2	0.041
Hnrnpd	heterogeneous nuclear ribonucleoprotein D	0.040
Ipo7	importin 7	0.039	Yeast
Tmem64	transmembrane protein 64	0.039
Rqcd1	rcd1 (required for cell differentiation) homolog 1 (S. pombe)	0.039
Ewsr1	Ewing sarcoma breakpoint region 1	0.038
Hgs	HGF-regulated tyrosine kinase substrate	0.037
Hlx	H2.0-like homeobox	0.037
Eprs	glutamyl-prolyl-tRNA synthetase	0.037
Thoc4	THO complex 4	0.035	Human Yeast Mouse
Pcmtd1	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.035
Nop58	NOP58 ribonucleoprotein homolog (yeast)	0.035
Cstf2	cleavage stimulation factor, 3' pre-RNA subunit 2	0.034
Hnrnpc	heterogeneous nuclear ribonucleoprotein C	0.034
Sbno1	sno, strawberry notch homolog 1 (Drosophila)	0.033
Ppp1r8	protein phosphatase 1, regulatory (inhibitor) subunit 8	0.033
Top1	topoisomerase (DNA) I	0.033
Anp32e	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	0.033
Hnrnpm	heterogeneous nuclear ribonucleoprotein M	0.033
Kif5b	kinesin family member 5B	0.033	Mouse
Haus6	HAUS augmin-like complex, subunit 6	0.033
Ncoa2	nuclear receptor coactivator 2	0.033
Syncrip	synaptotagmin binding, cytoplasmic RNA interacting protein	0.032
Donson	downstream neighbor of SON	0.031
Prpf8	pre-mRNA processing factor 8	0.030
Zfp207	zinc finger protein 207	0.030
Eif4a1	eukaryotic translation initiation factor 4A1	0.029
Akap9	A kinase (PRKA) anchor protein (yotiao) 9	0.029
Rpa2	replication protein A2	0.028
Hnrnpa1	heterogeneous nuclear ribonucleoprotein A1	0.028
Csnk2a1	casein kinase 2, alpha 1 polypeptide	0.028
Enoph1	enolase-phosphatase 1	0.026
Traf6	TNF receptor-associated factor 6	0.026
Thoc3	THO complex 3	0.026	Human
Caprin1	cell cycle associated protein 1	0.026
Lrrc40	leucine rich repeat containing 40	0.026
Utp18	UTP18, small subunit (SSU) processome component, homolog (yeast)	0.026
Fen1	flap structure specific endonuclease 1	0.026
Dhx9	DEAH (Asp-Glu-Ala-His) box polypeptide 9	0.025
Ddx39	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	0.025	Human Yeast Fly
Fubp1	far upstream element (FUSE) binding protein 1	0.024
AI314180	expressed sequence AI314180	0.024
Haus3	HAUS augmin-like complex, subunit 3	0.023
Rfc1	replication factor C (activator 1) 1	0.023
Cdk4	cyclin-dependent kinase 4	0.023
Srsf1	serine/arginine-rich splicing factor 1	0.023	Yeast
Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	0.023
Sf3a1	splicing factor 3a, subunit 1	0.022
Dido1	death inducer-obliterator 1	0.022
Nap1l1	nucleosome assembly protein 1-like 1	0.022
Bub3	budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	0.022
Csda	cold shock domain protein A	0.022
Srsf2	serine/arginine-rich splicing factor 2	0.022
Nup133	nucleoporin 133	0.022	Human
Pum1	pumilio 1 (Drosophila)	0.022
2610027L16Rik	RIKEN cDNA 2610027L16 gene	0.022
Sf3b2	splicing factor 3b, subunit 2	0.022
Mlh1	mutL homolog 1 (E. coli)	0.021
Lims1	LIM and senescent cell antigen-like domains 1	0.021
Sltm	SAFB-like, transcription modulator	0.021
Smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	0.021
Smc2	structural maintenance of chromosomes 2	0.021
Gabpb1	GA repeat binding protein, beta 1	0.020
Srek1	splicing regulatory glutamine/lysine-rich protein 1	0.020
Tpr	translocated promoter region	0.020
Hcfc1	host cell factor C1	0.020
Mtbp	Mdm2, transformed 3T3 cell double minute p53 binding protein	0.020
Lars	leucyl-tRNA synthetase	0.020
Tubgcp2	tubulin, gamma complex associated protein 2	0.020
Nxf3	nuclear RNA export factor 3	0.020
Rad23b	RAD23b homolog (S. cerevisiae)	0.019
Nop56	NOP56 ribonucleoprotein homolog (yeast)	0.019
Mybbp1a	MYB binding protein (P160) 1a	0.019
Nup85	nucleoporin 85	0.019
Xpo4	exportin 4	0.019
Xpo1	exportin 1, CRM1 homolog (yeast)	0.019	Yeast
Ccdc59	coiled-coil domain containing 59	0.019
Stk38	serine/threonine kinase 38	0.018
Cpsf1	cleavage and polyadenylation specific factor 1	0.018
Cflar	CASP8 and FADD-like apoptosis regulator	0.018
Mcm7	minichromosome maintenance deficient 7 (S. cerevisiae)	0.018
Birc6	baculoviral IAP repeat-containing 6	0.018
Prpf3	PRP3 pre-mRNA processing factor 3 homolog (yeast)	0.018
Usp15	ubiquitin specific peptidase 15	0.018
Rrp8	ribosomal RNA processing 8, methyltransferase, homolog (yeast)	0.018
Hn1	hematological and neurological expressed sequence 1	0.018
Polr3a	polymerase (RNA) III (DNA directed) polypeptide A	0.018
Sae1	SUMO1 activating enzyme subunit 1	0.018
H2afy	H2A histone family, member Y	0.017
Noc4l	nucleolar complex associated 4 homolog (S. cerevisiae)	0.017
Ctbp1	C-terminal binding protein 1	0.017
Nxf1	nuclear RNA export factor 1 homolog (S. cerevisiae)	0.017
Ruvbl1	RuvB-like protein 1	0.017
Ercc3	excision repair cross-complementing rodent repair deficiency, complementation group 3	0.017	Yeast
Pnn	pinin	0.017
Rbm10	RNA binding motif protein 10	0.017
Mphosph6	M phase phosphoprotein 6	0.016
Ddx6	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	0.016
Farsb	phenylalanyl-tRNA synthetase, beta subunit	0.016
Ythdf2	YTH domain family 2	0.016
Supt16h	suppressor of Ty 16 homolog (S. cerevisiae)	0.016
Pabpn1	poly(A) binding protein, nuclear 1	0.016
Nup37	nucleoporin 37	0.016
Exosc10	exosome component 10	0.016
Usp7	ubiquitin specific peptidase 7	0.016
Otud4	OTU domain containing 4	0.016
Top2b	topoisomerase (DNA) II beta	0.015
Med23	mediator complex subunit 23	0.015
Mcm2	minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	0.015
Pbrm1	polybromo 1	0.015
Dis3	DIS3 mitotic control homolog (S. cerevisiae)	0.015
Dtnb	dystrobrevin, beta	0.015
BC016423	cDNA sequence BC016423	0.015
Ndel1	nuclear distribution gene E-like homolog 1 (A. nidulans)	0.015
Nudc	nuclear distribution gene C homolog (Aspergillus)	0.015
Nvl	nuclear VCP-like	0.015
Dtymk	deoxythymidylate kinase	0.015
Nup160	nucleoporin 160	0.014
Usp8	ubiquitin specific peptidase 8	0.014
Smpd4	sphingomyelin phosphodiesterase 4	0.014
Cul5	cullin 5	0.014
Aaas	achalasia, adrenocortical insufficiency, alacrimia	0.014
Pcbp1	poly(rC) binding protein 1	0.014
Tcerg1	transcription elongation regulator 1 (CA150)	0.014
Pgap1	post-GPI attachment to proteins 1	0.014
Tra2a	transformer 2 alpha homolog (Drosophila)	0.013
Impad1	inositol monophosphatase domain containing 1	0.013
Kars	lysyl-tRNA synthetase	0.013
Rock2	Rho-associated coiled-coil containing protein kinase 2	0.013
Gars	glycyl-tRNA synthetase	0.013
Polr2d	polymerase (RNA) II (DNA directed) polypeptide D	0.013
Kif2a	kinesin family member 2A	0.013
U2af2	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	0.013
Zc3h11a	zinc finger CCCH type containing 11A	0.013
Hnrnpl	heterogeneous nuclear ribonucleoprotein L	0.013
Psmc4	proteasome (prosome, macropain) 26S subunit, ATPase, 4	0.013
Hap1	huntingtin-associated protein 1	0.013
Wbp2	WW domain binding protein 2	0.013
Ywhag	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	0.013
Snap25	synaptosomal-associated protein 25	0.013
Mcmbp	MCM (minichromosome maintenance deficient) binding protein	0.013
Tubb5	tubulin, beta 5	0.013
Nup153	nucleoporin 153	0.013
Cct8	chaperonin containing Tcp1, subunit 8 (theta)	0.013
U2af1	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1	0.013
Ddx39b	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	0.013	Human Yeast Fly
Zranb2	zinc finger, RAN-binding domain containing 2	0.012
Cpsf2	cleavage and polyadenylation specific factor 2	0.012
Setx	senataxin	0.012
Ikbkap	inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	0.012
Prrc2c	proline-rich coiled-coil 2C	0.012
Ppig	peptidyl-prolyl isomerase G (cyclophilin G)	0.012
Wbscr22	Williams Beuren syndrome chromosome region 22	0.012
Snrpd1	small nuclear ribonucleoprotein D1	0.012
Myef2	myelin basic protein expression factor 2, repressor	0.012
Pgd	phosphogluconate dehydrogenase	0.012
Hnrnpab	heterogeneous nuclear ribonucleoprotein A/B	0.012
Upf1	UPF1 regulator of nonsense transcripts homolog (yeast)	0.012
Srsf6	serine/arginine-rich splicing factor 6	0.012
Snrpf	small nuclear ribonucleoprotein polypeptide F	0.012
Anapc1	anaphase promoting complex subunit 1	0.011
Golim4	golgi integral membrane protein 4	0.011
Mthfd1l	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.011
Hsp90aa1	heat shock protein 90, alpha (cytosolic), class A member 1	0.011
Srsf4	serine/arginine-rich splicing factor 4	0.011
Zfp445	zinc finger protein 445	0.011
Ddx19a	DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a	0.011	Yeast
Rpa1	replication protein A1	0.011
Mysm1	myb-like, SWIRM and MPN domains 1	0.011
Usp37	ubiquitin specific peptidase 37	0.011
Ywhah	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	0.011
Usp14	ubiquitin specific peptidase 14	0.011
Itsn2	intersectin 2	0.011
Nxt1	NTF2-related export protein 1	0.011
Prpf38b	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	0.010
Axin1	axin 1	0.010
Polr3f	polymerase (RNA) III (DNA directed) polypeptide F	0.010
Ints8	integrator complex subunit 8	0.010
Senp1	SUMO1/sentrin specific peptidase 1	0.010
Mtm1	X-linked myotubular myopathy gene 1	0.010
Nup62	nucleoporin 62	0.010
Lsm2	LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.010
Cpsf3l	cleavage and polyadenylation specific factor 3-like	0.010
Rbm15	RNA binding motif protein 15	0.010
Qk	quaking	0.010