IMP: Integrative Multi-species Prediction

Mus musculus

5 genes annotated in mouse

Multi-species View

positive regulation of dna templated transcription initiation

GO:2000144

Any process that activates or increases the frequency, rate or extent of DNA-templated transcription initiation.

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Known genes in the process in mouseInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "positive regulation of dna templated transcription initiation"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "positive regulation of dna templated transcription initiation" (in gray)

Name	Description	Probability	Func Analog Organism
Shh	sonic hedgehog	0.988
Fgf8	fibroblast growth factor 8	0.977
Pax2	paired box gene 2	0.974
Gli3	GLI-Kruppel family member GLI3	0.923
Fgfr2	fibroblast growth factor receptor 2	0.679
Gli2	GLI-Kruppel family member GLI2	0.645
Psmd4	proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	0.504
Sox9	SRY-box containing gene 9	0.482
Tbx1	T-box 1	0.481
Gata4	GATA binding protein 4	0.477
Rarg	retinoic acid receptor, gamma	0.452
Hand2	heart and neural crest derivatives expressed transcript 2	0.443
Gdnf	glial cell line derived neurotrophic factor	0.437
Hoxd11	homeobox D11	0.413
Pax8	paired box gene 8	0.409
Hoxd13	homeobox D13	0.408
Nfkb2	nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	0.406
Vax1	ventral anterior homeobox containing gene 1	0.403
Lhx1	LIM homeobox protein 1	0.394
Hand1	heart and neural crest derivatives expressed transcript 1	0.388
Hoxa13	homeobox A13	0.320
T	brachyury	0.309
Cct7	chaperonin containing Tcp1, subunit 7 (eta)	0.305
Socs1	suppressor of cytokine signaling 1	0.303
Wnt3a	wingless-related MMTV integration site 3A	0.300	Mouse
Nkx6-1	NK6 homeobox 1	0.287
Foxc1	forkhead box C1	0.270
Nog	noggin	0.246
Wnt6	wingless-related MMTV integration site 6	0.238	Mouse
Gata6	GATA binding protein 6	0.237
Hoxa1	homeobox A1	0.221
Lmx1a	LIM homeobox transcription factor 1 alpha	0.203
Fgf10	fibroblast growth factor 10	0.193
Rxra	retinoid X receptor alpha	0.192
Suz12	suppressor of zeste 12 homolog (Drosophila)	0.185
Pitx2	paired-like homeodomain transcription factor 2	0.178
Rarb	retinoic acid receptor, beta	0.177
Dkk1	dickkopf homolog 1 (Xenopus laevis)	0.174
Ikzf1	IKAROS family zinc finger 1	0.172
Ror2	receptor tyrosine kinase-like orphan receptor 2	0.171
Stat2	signal transducer and activator of transcription 2	0.163
Uba7	ubiquitin-like modifier activating enzyme 7	0.159
Foxc2	forkhead box C2	0.149
Msx1	homeobox, msh-like 1	0.148
Barx2	BarH-like homeobox 2	0.148
Cd19	CD19 antigen	0.132
Mesp1	mesoderm posterior 1	0.126
Wnt4	wingless-related MMTV integration site 4	0.125	Mouse
Barx1	BarH-like homeobox 1	0.124
Emx2	empty spiracles homolog 2 (Drosophila)	0.118
Foxd2	forkhead box D2	0.116
Psmc5	protease (prosome, macropain) 26S subunit, ATPase 5	0.112	Yeast
Trp63	transformation related protein 63	0.111
Fgf3	fibroblast growth factor 3	0.108
Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.108
Trp53	transformation related protein 53	0.107
En1	engrailed 1	0.104
Tbx3	T-box 3	0.103
Hmx3	H6 homeobox 3	0.102
Pthlh	parathyroid hormone-like peptide	0.099
Pax1	paired box gene 1	0.097
Tbx2	T-box 2	0.096
Rara	retinoic acid receptor, alpha	0.092
Foxn1	forkhead box N1	0.091
Twist2	twist homolog 2 (Drosophila)	0.091
Cdx1	caudal type homeobox 1	0.090
Ntf3	neurotrophin 3	0.077
Ret	ret proto-oncogene	0.076
Gata5	GATA binding protein 5	0.075
Otx2	orthodenticle homolog 2 (Drosophila)	0.074
Myl2	myosin, light polypeptide 2, regulatory, cardiac, slow	0.072
Lmx1b	LIM homeobox transcription factor 1 beta	0.067
Batf3	basic leucine zipper transcription factor, ATF-like 3	0.066
Pitx3	paired-like homeodomain transcription factor 3	0.063
Nr5a1	nuclear receptor subfamily 5, group A, member 1	0.062
Otx1	orthodenticle homolog 1 (Drosophila)	0.060
Wnt2b	wingless related MMTV integration site 2b	0.060	Mouse
Hoxa11	homeobox A11	0.057
Gli1	GLI-Kruppel family member GLI1	0.057
Sim2	single-minded homolog 2 (Drosophila)	0.057
Ar	androgen receptor	0.056
Isl1	ISL1 transcription factor, LIM/homeodomain	0.053
Wt1	Wilms tumor 1 homolog	0.052
Cd40	CD40 antigen	0.052
Nfkb1	nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	0.051
Smo	smoothened homolog (Drosophila)	0.051
Bmp7	bone morphogenetic protein 7	0.049
Fgf15	fibroblast growth factor 15	0.048
Pou3f3	POU domain, class 3, transcription factor 3	0.048
Wnt10b	wingless related MMTV integration site 10b	0.047
Hoxd3	homeobox D3	0.047
Adra2b	adrenergic receptor, alpha 2b	0.046
Sfpi1	SFFV proviral integration 1	0.046
Tbx5	T-box 5	0.046
Bmp4	bone morphogenetic protein 4	0.045
Neurog1	neurogenin 1	0.045
Pitx1	paired-like homeodomain transcription factor 1	0.045
Hoxa4	homeobox A4	0.045
Lhx3	LIM homeobox protein 3	0.045
Six3	sine oculis-related homeobox 3 homolog (Drosophila)	0.045
Six5	sine oculis-related homeobox 5 homolog (Drosophila)	0.044
Foxf1a	forkhead box F1a	0.043
Hoxa2	homeobox A2	0.043
Efna2	ephrin A2	0.043
Bcl2l11	BCL2-like 11 (apoptosis facilitator)	0.042
Nkx3-2	NK3 homeobox 2	0.041	Mouse
Ptch1	patched homolog 1	0.041
Foxa2	forkhead box A2	0.041
Scaf11	SR-related CTD-associated factor 11	0.040
Amhr2	anti-Mullerian hormone type 2 receptor	0.039
Wnt3	wingless-related MMTV integration site 3	0.039	Mouse
Rpa1	replication protein A1	0.039
Ihh	Indian hedgehog	0.039
Hnf1a	HNF1 homeobox A	0.039	Human
Ifit3	interferon-induced protein with tetratricopeptide repeats 3	0.039
Amh	anti-Mullerian hormone	0.038
Epha1	Eph receptor A1	0.038
Ptpn11	protein tyrosine phosphatase, non-receptor type 11	0.038
Btbd17	BTB (POZ) domain containing 17	0.037
Fgfr1	fibroblast growth factor receptor 1	0.036
Hmx1	H6 homeobox 1	0.036
Nkx2-3	NK2 transcription factor related, locus 3 (Drosophila)	0.036	Mouse
Aldh1a2	aldehyde dehydrogenase family 1, subfamily A2	0.035
Lhx5	LIM homeobox protein 5	0.035
Wnt9a	wingless-type MMTV integration site 9A	0.035	Mouse
Ghr	growth hormone receptor	0.035
Fut7	fucosyltransferase 7	0.035
Efna4	ephrin A4	0.035
Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)	0.034
Nkx1-2	NK1 transcription factor related, locus 2 (Drosophila)	0.034
Relb	avian reticuloendotheliosis viral (v-rel) oncogene related B	0.034
Ptk7	PTK7 protein tyrosine kinase 7	0.034
Igdcc3	immunoglobulin superfamily, DCC subclass, member 3	0.034
Ttc7	tetratricopeptide repeat domain 7	0.033
Bcl2	B-cell leukemia/lymphoma 2	0.033
Npas1	neuronal PAS domain protein 1	0.033
Tead3	TEA domain family member 3	0.033
Gtf2f1	general transcription factor IIF, polypeptide 1	0.033
Col2a1	collagen, type II, alpha 1	0.032
Alx4	aristaless-like homeobox 4	0.032
Foxe1	forkhead box E1	0.032
Psmd12	proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	0.032
Bcl3	B-cell leukemia/lymphoma 3	0.031
Ddx46	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	0.031
Insm1	insulinoma-associated 1	0.031
Psma4	proteasome (prosome, macropain) subunit, alpha type 4	0.031
Foxp3	forkhead box P3	0.031
Pdx1	pancreatic and duodenal homeobox 1	0.031
Hes1	hairy and enhancer of split 1 (Drosophila)	0.030
Otp	orthopedia homolog (Drosophila)	0.029
Foxb1	forkhead box B1	0.029
Grin2d	glutamate receptor, ionotropic, NMDA2D (epsilon 4)	0.029
Fzd8	frizzled homolog 8 (Drosophila)	0.029
Myd88	myeloid differentiation primary response gene 88	0.029
Map3k14	mitogen-activated protein kinase kinase kinase 14	0.029
Emx1	empty spiracles homolog 1 (Drosophila)	0.029
Tlx3	T-cell leukemia, homeobox 3	0.028
Irf4	interferon regulatory factor 4	0.028	Mouse
Papln	papilin, proteoglycan-like sulfated glycoprotein	0.028
Fzd10	frizzled homolog 10 (Drosophila)	0.027
Psmb8	proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)	0.027
Gbx2	gastrulation brain homeobox 2	0.027
Acvr1	activin A receptor, type 1	0.027
Alx3	aristaless-like homeobox 3	0.027
Bnc1	basonuclin 1	0.026
Stag1	stromal antigen 1	0.025
Cyp26a1	cytochrome P450, family 26, subfamily a, polypeptide 1	0.025
Onecut1	one cut domain, family member 1	0.025
Fgf18	fibroblast growth factor 18	0.025
Foxe3	forkhead box E3	0.025
Tcfap2a	transcription factor AP-2, alpha	0.025
Ctnnb1	catenin (cadherin associated protein), beta 1	0.025
Fgf17	fibroblast growth factor 17	0.025
Hsd11b2	hydroxysteroid 11-beta dehydrogenase 2	0.025
Dlx5	distal-less homeobox 5	0.024
Six6	sine oculis-related homeobox 6 homolog (Drosophila)	0.024
Psmb7	proteasome (prosome, macropain) subunit, beta type 7	0.024
Psmd6	proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	0.024
Scn5a	sodium channel, voltage-gated, type V, alpha	0.024
Hoxd1	homeobox D1	0.023
Nfatc2	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.023
Tnfaip3	tumor necrosis factor, alpha-induced protein 3	0.023
Fgf5	fibroblast growth factor 5	0.022
Gipc3	GIPC PDZ domain containing family, member 3	0.022
Cldn3	claudin 3	0.021
Tcf21	transcription factor 21	0.021
Sox3	SRY-box containing gene 3	0.021
Chd7	chromodomain helicase DNA binding protein 7	0.020
Plcg2	phospholipase C, gamma 2	0.020
BC024139	cDNA sequence BC024139	0.020
Erbb2	v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	0.020
Nobox	NOBOX oogenesis homeobox	0.020
Pax5	paired box gene 5	0.020
Rsph6a	radial spoke head 6 homolog A (Chlamydomonas)	0.020
Lyn	Yamaguchi sarcoma viral (v-yes-1) oncogene homolog	0.020
Gata3	GATA binding protein 3	0.020
Slc16a8	solute carrier family 16 (monocarboxylic acid transporters), member 8	0.019
Pou3f1	POU domain, class 3, transcription factor 1	0.019
Pou2f2	POU domain, class 2, transcription factor 2	0.019
Efnb2	ephrin B2	0.019
Irf5	interferon regulatory factor 5	0.019	Mouse
Lef1	lymphoid enhancer binding factor 1	0.019
Sox11	SRY-box containing gene 11	0.019
Padi3	peptidyl arginine deiminase, type III	0.019
Ror1	receptor tyrosine kinase-like orphan receptor 1	0.019
Fgfrl1	fibroblast growth factor receptor-like 1	0.019
Foxn4	forkhead box N4	0.018
Prrx2	paired related homeobox 2	0.018
Nkx2-6	NK2 transcription factor related, locus 6 (Drosophila)	0.018	Mouse
Smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	0.018
Bms1	BMS1 homolog, ribosome assembly protein (yeast)	0.018
Gja5	gap junction protein, alpha 5	0.018
Hnrnpd	heterogeneous nuclear ribonucleoprotein D	0.018
Tlx2	T-cell leukemia, homeobox 2	0.017
Il27ra	interleukin 27 receptor, alpha	0.017
Emid2	EMI domain containing 2	0.017
Tap2	transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	0.017
Pax3	paired box gene 3	0.017
Stat3	signal transducer and activator of transcription 3	0.017
Nos3	nitric oxide synthase 3, endothelial cell	0.017
Hcn4	hyperpolarization-activated, cyclic nucleotide-gated K+ 4	0.017
Hoxa10	homeobox A10	0.017
Chrd	chordin	0.016
Nrtn	neurturin	0.016
Ribc2	RIB43A domain with coiled-coils 2	0.016
Slc32a1	solute carrier family 32 (GABA vesicular transporter), member 1	0.016
Spib	Spi-B transcription factor (Spi-1/PU.1 related)	0.016
Hoxd12	homeobox D12	0.016
Fbn2	fibrillin 2	0.016
Hoxa7	homeobox A7	0.016
Rfc1	replication factor C (activator 1) 1	0.016
Tcf3	transcription factor 3	0.016
Rax	retina and anterior neural fold homeobox	0.016
Igh	immunoglobulin heavy chain complex	0.016
Gpr27	G protein-coupled receptor 27	0.016
Col22a1	collagen, type XXII, alpha 1	0.016
Nodal	nodal	0.016
Sall3	sal-like 3 (Drosophila)	0.016
Neurog3	neurogenin 3	0.016
Hoxb6	homeobox B6	0.015
Wnt5a	wingless-related MMTV integration site 5A	0.015	Mouse
Bik	BCL2-interacting killer	0.015
Ephb2	Eph receptor B2	0.015
Foxa1	forkhead box A1	0.015
Jag1	jagged 1	0.015
Tgfb2	transforming growth factor, beta 2	0.015
Bmp8b	bone morphogenetic protein 8b	0.015
Rif1	Rap1 interacting factor 1 homolog (yeast)	0.015
Pou5f1	POU domain, class 5, transcription factor 1	0.015
Fgfr4	fibroblast growth factor receptor 4	0.015
Gsc	goosecoid homeobox	0.014
Atp11c	ATPase, class VI, type 11C	0.014
Pcdh12	protocadherin 12	0.014
Dact1	dapper homolog 1, antagonist of beta-catenin (xenopus)	0.014
Hoxd9	homeobox D9	0.014
Esr2	estrogen receptor 2 (beta)	0.014
Usp18	ubiquitin specific peptidase 18	0.014
Ascl1	achaete-scute complex homolog 1 (Drosophila)	0.013
Smad6	MAD homolog 6 (Drosophila)	0.013
Slc34a2	solute carrier family 34 (sodium phosphate), member 2	0.013
Fgfr3	fibroblast growth factor receptor 3	0.013
Col13a1	collagen, type XIII, alpha 1	0.013
Omp	olfactory marker protein	0.013
Zfpm2	zinc finger protein, multitype 2	0.013
Dlx1	distal-less homeobox 1	0.013
Srebf2	sterol regulatory element binding factor 2	0.013
Batf	basic leucine zipper transcription factor, ATF-like	0.013
3110079O15Rik	RIKEN cDNA 3110079O15 gene	0.013
Sh3pxd2a	SH3 and PX domains 2A	0.013
Pknox1	Pbx/knotted 1 homeobox	0.013
Ptpn6	protein tyrosine phosphatase, non-receptor type 6	0.013
Tapbp	TAP binding protein	0.013
Mycn	v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	0.013
Cd79a	CD79A antigen (immunoglobulin-associated alpha)	0.013
Wnt9b	wingless-type MMTV integration site 9B	0.013	Mouse
Fosl2	fos-like antigen 2	0.013
Hes2	hairy and enhancer of split 2 (Drosophila)	0.012
Nkx2-4	NK2 transcription factor related, locus 4 (Drosophila)	0.012	Mouse
Gpc3	glypican 3	0.012
Tnf	tumor necrosis factor	0.012
Foxf2	forkhead box F2	0.012
Crlf1	cytokine receptor-like factor 1	0.012
Psma6	proteasome (prosome, macropain) subunit, alpha type 6	0.012
Cops2	COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	0.012
Zfp771	zinc finger protein 771	0.012
Psen1	presenilin 1	0.012
Figla	folliculogenesis specific basic helix-loop-helix	0.012
Trim28	tripartite motif-containing 28	0.012
Hoxc9	homeobox C9	0.012
Phox2a	paired-like homeobox 2a	0.012
Krt15	keratin 15	0.012
Etv2	ets variant gene 2	0.012
Cd79b	CD79B antigen	0.012
Prkcd	protein kinase C, delta	0.012
Psmd13	proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	0.011
Zic2	zinc finger protein of the cerebellum 2	0.011
Fzd1	frizzled homolog 1 (Drosophila)	0.011
Six1	sine oculis-related homeobox 1 homolog (Drosophila)	0.011
Ptger1	prostaglandin E receptor 1 (subtype EP1)	0.011
Vcp	valosin containing protein	0.011
Cyp24a1	cytochrome P450, family 24, subfamily a, polypeptide 1	0.011
Oprd1	opioid receptor, delta 1	0.011
Psmb9	proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)	0.011
Kcnj5	potassium inwardly-rectifying channel, subfamily J, member 5	0.011
Rem1	rad and gem related GTP binding protein 1	0.011
Il4	interleukin 4	0.011
Odf3	outer dense fiber of sperm tails 3	0.011
Akp3	alkaline phosphatase 3, intestine, not Mn requiring	0.011
Sfn	stratifin	0.011
Psmd14	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14	0.011
Sftpb	surfactant associated protein B	0.011
Tcfap2c	transcription factor AP-2, gamma	0.011
Artn	artemin	0.011
Tcf15	transcription factor 15	0.011
Psmc2	proteasome (prosome, macropain) 26S subunit, ATPase 2	0.011	Yeast
Rnf2	ring finger protein 2	0.011
Ptpn22	protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	0.010
Fas	Fas (TNF receptor superfamily member 6)	0.010
Gpr50	G-protein-coupled receptor 50	0.010
Stat1	signal transducer and activator of transcription 1	0.010
Atrx	alpha thalassemia/mental retardation syndrome X-linked homolog (human)	0.010
Wnt7a	wingless-related MMTV integration site 7A	0.010	Mouse
Lyzl4	lysozyme-like 4	0.010
Cd74	CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	0.010
Cd22	CD22 antigen	0.010
Kl	klotho	0.010
Tctex1d4	Tctex1 domain containing 4	0.010