IMP: Integrative Multi-species Prediction

Mus musculus

16 genes annotated in mouse

Multi-species View

mrna 3 end processing

GO:0031124

Any process involved in forming the mature 3' end of an mRNA molecule.

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Known genes in the process in mouseInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "mrna 3 end processing"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "mrna 3 end processing" (in gray)

Name	Description	Probability	Func Analog Organism
Prnp	prion protein	0.998
Aplp2	amyloid beta (A4) precursor-like protein 2	0.995	Mouse
Eif2c2	eukaryotic translation initiation factor 2C, 2	0.930
Neurl1a	neuralized homolog 1A (Drosophila)	0.852
Clstn1	calsyntenin 1	0.591
App	amyloid beta (A4) precursor protein	0.467
Egr1	early growth response 1	0.427
Fos	FBJ osteosarcoma oncogene	0.420
Junb	Jun-B oncogene	0.410
Dusp1	dual specificity phosphatase 1	0.356
Rasal1	RAS protein activator like 1 (GAP1 like)	0.302
Btg1	B-cell translocation gene 1, anti-proliferative	0.291
Ldb3	LIM domain binding 3	0.289
Mlh1	mutL homolog 1 (E. coli)	0.260
Usp9x	ubiquitin specific peptidase 9, X chromosome	0.250
Mapk8ip1	mitogen-activated protein kinase 8 interacting protein 1	0.243
Pard3	par-3 (partitioning defective 3) homolog (C. elegans)	0.240
Nono	non-POU-domain-containing, octamer binding protein	0.189
Cdk1	cyclin-dependent kinase 1	0.183
Kpna2	karyopherin (importin) alpha 2	0.183
Btg2	B-cell translocation gene 2, anti-proliferative	0.181	Human
Srsf7	serine/arginine-rich splicing factor 7	0.172
Elp2	elongation protein 2 homolog (S. cerevisiae)	0.161
Gtf3c2	general transcription factor IIIC, polypeptide 2, beta	0.157
Pabpc1	poly(A) binding protein, cytoplasmic 1	0.153
Clk2	CDC-like kinase 2	0.132
Parp2	poly (ADP-ribose) polymerase family, member 2	0.132
Zfp830	zinc finger protein 830	0.129
Actl6a	actin-like 6A	0.122
Sfpq	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)	0.119
Tex11	testis expressed gene 11	0.117
Rcor1	REST corepressor 1	0.107
Rbm10	RNA binding motif protein 10	0.107
Ddx6	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	0.103
Cks2	CDC28 protein kinase regulatory subunit 2	0.101
Ier2	immediate early response 2	0.087
Trim32	tripartite motif-containing 32	0.080
Ezh2	enhancer of zeste homolog 2 (Drosophila)	0.076
Mael	maelstrom homolog (Drosophila)	0.076
Numb	numb gene homolog (Drosophila)	0.073
Itm2b	integral membrane protein 2B	0.071
Nr4a1	nuclear receptor subfamily 4, group A, member 1	0.070
Med23	mediator complex subunit 23	0.068
Zfp36	zinc finger protein 36	0.068
Cnot7	CCR4-NOT transcription complex, subunit 7	0.067
Atf3	activating transcription factor 3	0.066
Cpeb2	cytoplasmic polyadenylation element binding protein 2	0.060	Mouse
Prkdc	protein kinase, DNA activated, catalytic polypeptide	0.059
Akt2	thymoma viral proto-oncogene 2	0.058	Yeast
Hspa8	heat shock protein 8	0.057
Nxf2	nuclear RNA export factor 2	0.053	Fly
Nasp	nuclear autoantigenic sperm protein (histone-binding)	0.049
Vhl	von Hippel-Lindau tumor suppressor	0.049
Rbm26	RNA binding motif protein 26	0.048
Srrt	serrate RNA effector molecule homolog (Arabidopsis)	0.048
Ttc27	tetratricopeptide repeat domain 27	0.047
Ppp1r15a	protein phosphatase 1, regulatory (inhibitor) subunit 15A	0.046
Prc1	protein regulator of cytokinesis 1	0.045
Hsp90aa1	heat shock protein 90, alpha (cytosolic), class A member 1	0.043
Mad2l1	MAD2 mitotic arrest deficient-like 1 (yeast)	0.043
Kif1b	kinesin family member 1B	0.043
Cpeb1	cytoplasmic polyadenylation element binding protein 1	0.043	Mouse Fly
Cpsf1	cleavage and polyadenylation specific factor 1	0.042
Dtymk	deoxythymidylate kinase	0.042
Hsp90ab1	heat shock protein 90 alpha (cytosolic), class B member 1	0.042
Ddx46	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	0.042
Clock	circadian locomotor output cycles kaput	0.040
Nanos2	nanos homolog 2 (Drosophila)	0.039
Prkce	protein kinase C, epsilon	0.038
Atad2b	ATPase family, AAA domain containing 2B	0.037
Nphs2	nephrosis 2 homolog, podocin (human)	0.037
Cpsf3	cleavage and polyadenylation specificity factor 3	0.037
Psen1	presenilin 1	0.036
Impdh2	inosine 5'-phosphate dehydrogenase 2	0.036
Kifc2	kinesin family member C2	0.035
Hivep1	human immunodeficiency virus type I enhancer binding protein 1	0.035
Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	0.034
Jun	Jun oncogene	0.034
Csrnp1	cysteine-serine-rich nuclear protein 1	0.034
Eea1	early endosome antigen 1	0.034
Cnot6	CCR4-NOT transcription complex, subunit 6	0.034	Fly
Srsf1	serine/arginine-rich splicing factor 1	0.033
Kif20a	kinesin family member 20A	0.033
Atf2	activating transcription factor 2	0.032
Tnrc6b	trinucleotide repeat containing 6b	0.032
Suz12	suppressor of zeste 12 homolog (Drosophila)	0.031
Rps3a	ribosomal protein S3A	0.030
Zfp322a	zinc finger protein 322A	0.030
Dlg4	discs, large homolog 4 (Drosophila)	0.029
Rod1	ROD1 regulator of differentiation 1 (S. pombe)	0.028
Dmtf1	cyclin D binding myb-like transcription factor 1	0.028
Fastkd2	FAST kinase domains 2	0.028
Brd2	bromodomain containing 2	0.027
Tgif1	TGFB-induced factor homeobox 1	0.027
Mettl3	methyltransferase like 3	0.027
Cd28	CD28 antigen	0.027
Otud4	OTU domain containing 4	0.027
Piwil2	piwi-like homolog 2 (Drosophila)	0.027	Fly
Lbr	lamin B receptor	0.026
Tial1	Tia1 cytotoxic granule-associated RNA binding protein-like 1	0.026
Bcl2	B-cell leukemia/lymphoma 2	0.025
Utp20	UTP20, small subunit (SSU) processome component, homolog (yeast)	0.025
Xab2	XPA binding protein 2	0.025
Lsamp	limbic system-associated membrane protein	0.025
Tfdp1	transcription factor Dp 1	0.024
Ccnl2	cyclin L2	0.024
Peli1	pellino 1	0.024
Naa35	N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.024
Trim46	tripartite motif-containing 46	0.024
Ccna2	cyclin A2	0.023
Cct3	chaperonin containing Tcp1, subunit 3 (gamma)	0.023
Tnfrsf13b	tumor necrosis factor receptor superfamily, member 13b	0.023
Rab14	RAB14, member RAS oncogene family	0.023
Mll1	myeloid/lymphoid or mixed-lineage leukemia 1	0.023
Pds5b	PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	0.023
Zfp207	zinc finger protein 207	0.023
Ilf3	interleukin enhancer binding factor 3	0.023
Farsb	phenylalanyl-tRNA synthetase, beta subunit	0.023
Pola1	polymerase (DNA directed), alpha 1	0.023
Alkbh1	alkB, alkylation repair homolog 1 (E. coli)	0.023
Mafk	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	0.022
Smc2	structural maintenance of chromosomes 2	0.022
Actn2	actinin alpha 2	0.022
Fen1	flap structure specific endonuclease 1	0.022
Lmx1b	LIM homeobox transcription factor 1 beta	0.021
Mapk1	mitogen-activated protein kinase 1	0.021
Ilk	integrin linked kinase	0.021
Ythdf3	YTH domain family 3	0.021
Smc4	structural maintenance of chromosomes 4	0.020
Tsn	translin	0.020
Phlpp1	PH domain and leucine rich repeat protein phosphatase 1	0.020
Elavl1	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	0.020
Cebpb	CCAAT/enhancer binding protein (C/EBP), beta	0.019
Tnfaip3	tumor necrosis factor, alpha-induced protein 3	0.019
Cacnb2	calcium channel, voltage-dependent, beta 2 subunit	0.019
Casp2	caspase 2	0.019
Ppp3cb	protein phosphatase 3, catalytic subunit, beta isoform	0.018
Ddx17	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	0.018
L1cam	L1 cell adhesion molecule	0.018
Pum2	pumilio 2 (Drosophila)	0.018
Rora	RAR-related orphan receptor alpha	0.018
Mier3	mesoderm induction early response 1, family member 3	0.018
Rnf38	ring finger protein 38	0.018
Akt1	thymoma viral proto-oncogene 1	0.018	Yeast
Arc	activity regulated cytoskeletal-associated protein	0.018
Sp1	trans-acting transcription factor 1	0.018
Brd4	bromodomain containing 4	0.018
Nxf3	nuclear RNA export factor 3	0.018	Fly
Bub1b	budding uninhibited by benzimidazoles 1 homolog, beta (S. cerevisiae)	0.018
B230219D22Rik	RIKEN cDNA B230219D22 gene	0.018
Prpsap1	phosphoribosyl pyrophosphate synthetase-associated protein 1	0.017
Cnot1	CCR4-NOT transcription complex, subunit 1	0.017
Znrf2	zinc and ring finger 2	0.017
Slbp	stem-loop binding protein	0.017
Rbbp6	retinoblastoma binding protein 6	0.017
Rac1	RAS-related C3 botulinum substrate 1	0.017
Elp3	elongation protein 3 homolog (S. cerevisiae)	0.017
Rnf11	ring finger protein 11	0.016
Apex1	apurinic/apyrimidinic endonuclease 1	0.016
Dhx16	DEAH (Asp-Glu-Ala-His) box polypeptide 16	0.016
Sfxn1	sideroflexin 1	0.016
Pcbp2	poly(rC) binding protein 2	0.016
Sos2	son of sevenless homolog 2 (Drosophila)	0.016
Psap	prosaposin	0.015
Cpne1	copine I	0.015
Ccni	cyclin I	0.015
Xrcc6	X-ray repair complementing defective repair in Chinese hamster cells 6	0.015
Irf2bp2	interferon regulatory factor 2 binding protein 2	0.015
Nfkbiz	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	0.015
Tob1	transducer of ErbB-2.1	0.015
Uimc1	ubiquitin interaction motif containing 1	0.015
Ints2	integrator complex subunit 2	0.014
Brd1	bromodomain containing 1	0.014
Vps16	vacuolar protein sorting 16 (yeast)	0.014
Nup85	nucleoporin 85	0.014
Ctdnep1	CTD nuclear envelope phosphatase 1	0.014
Sf3b3	splicing factor 3b, subunit 3	0.014
Fam168b	family with sequence similarity 168, member B	0.014
Igh	immunoglobulin heavy chain complex	0.014
Phlda1	pleckstrin homology-like domain, family A, member 1	0.014
Rfx7	regulatory factor X, 7	0.013
Nup37	nucleoporin 37	0.013
D19Wsu162e	DNA segment, Chr 19, Wayne State University 162, expressed	0.013
Dyrk1a	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a	0.013
Mapkapk2	MAP kinase-activated protein kinase 2	0.013
Ankrd17	ankyrin repeat domain 17	0.013
Dnmt1	DNA methyltransferase (cytosine-5) 1	0.013
Foxk1	forkhead box K1	0.013
Srsf6	serine/arginine-rich splicing factor 6	0.013
Man1a2	mannosidase, alpha, class 1A, member 2	0.013
Cdc7	cell division cycle 7 (S. cerevisiae)	0.013
Atp2c1	ATPase, Ca++-sequestering	0.013
Siah1b	seven in absentia 1B	0.013
Atp8a1	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	0.013
Cpeb4	cytoplasmic polyadenylation element binding protein 4	0.013	Mouse
Ints6	integrator complex subunit 6	0.013
Pbk	PDZ binding kinase	0.013
Eri1	exoribonuclease 1	0.013
Atp1b1	ATPase, Na+/K+ transporting, beta 1 polypeptide	0.013
Ate1	arginyltransferase 1	0.013
Prpf6	PRP6 pre-mRNA splicing factor 6 homolog (yeast)	0.013
Ube2c	ubiquitin-conjugating enzyme E2C	0.013
Ube3a	ubiquitin protein ligase E3A	0.012
Btaf1	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)	0.012
Larp7	La ribonucleoprotein domain family, member 7	0.012
Blnk	B-cell linker	0.012
Ssrp1	structure specific recognition protein 1	0.012
Mtmr1	myotubularin related protein 1	0.012
Fam193b	family with sequence similarity 193, member B	0.012
Papola	poly (A) polymerase alpha	0.012
Rfc2	replication factor C (activator 1) 2	0.012
Snrpa1	small nuclear ribonucleoprotein polypeptide A'	0.012
Fndc3a	fibronectin type III domain containing 3A	0.012
Gsk3b	glycogen synthase kinase 3 beta	0.012
Ptges3	prostaglandin E synthase 3 (cytosolic)	0.012
Appbp2	amyloid beta precursor protein (cytoplasmic tail) binding protein 2	0.012
Ganab	alpha glucosidase 2 alpha neutral subunit	0.012
Npc1	Niemann Pick type C1	0.012
Grb2	growth factor receptor bound protein 2	0.012
Ddb2	damage specific DNA binding protein 2	0.012
D19Bwg1357e	DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	0.012
Purb	purine rich element binding protein B	0.012
Galk1	galactokinase 1	0.012
Nudt21	nudix (nucleoside diphosphate linked moiety X)-type motif 21	0.012
Homer1	homer homolog 1 (Drosophila)	0.012
Top2a	topoisomerase (DNA) II alpha	0.012
Ppargc1a	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	0.012
Crb2	crumbs homolog 2 (Drosophila)	0.012
Ppan	peter pan homolog (Drosophila)	0.012
Map3k5	mitogen-activated protein kinase kinase kinase 5	0.012
Rnf112	ring finger protein 112	0.012
Foxo1	forkhead box O1	0.012
Snrpe	small nuclear ribonucleoprotein E	0.012
Zmym2	zinc finger, MYM-type 2	0.012
2410042D21Rik	RIKEN cDNA 2410042D21 gene	0.011
Crebzf	CREB/ATF bZIP transcription factor	0.011
Scamp1	secretory carrier membrane protein 1	0.011
Dab1	disabled homolog 1 (Drosophila)	0.011
Rnf111	ring finger 111	0.011
Zbtb32	zinc finger and BTB domain containing 32	0.011
Clu	clusterin	0.011
Rpusd4	RNA pseudouridylate synthase domain containing 4	0.011
Vrtn	vertebrae development homolog (pig)	0.011
Fastkd5	FAST kinase domains 5	0.011
Rbbp4	retinoblastoma binding protein 4	0.011
Mapkap1	mitogen-activated protein kinase associated protein 1	0.011
Kctd20	potassium channel tetramerisation domain containing 20	0.011
Dhx15	DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.011
Atad3a	ATPase family, AAA domain containing 3A	0.011
Atp11c	ATPase, class VI, type 11C	0.011
Tle3	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	0.011
Zbtb11	zinc finger and BTB domain containing 11	0.011
Ppp3ca	protein phosphatase 3, catalytic subunit, alpha isoform	0.011
4833420G17Rik	RIKEN cDNA 4833420G17 gene	0.011
Dlg1	discs, large homolog 1 (Drosophila)	0.011
Apbb1	amyloid beta (A4) precursor protein-binding, family B, member 1	0.011
Cbl	Casitas B-lineage lymphoma	0.011
Arid2	AT rich interactive domain 2 (ARID, RFX-like)	0.011
Dhx57	DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	0.011
Cd2ap	CD2-associated protein	0.010
Pex5	peroxisomal biogenesis factor 5	0.010
Nlk	nemo like kinase	0.010
Tada1	transcriptional adaptor 1	0.010
Msl2	male-specific lethal 2 homolog (Drosophila)	0.010
Ubp1	upstream binding protein 1	0.010
Capn1	calpain 1	0.010
Zcchc8	zinc finger, CCHC domain containing 8	0.010
Snta1	syntrophin, acidic 1	0.010
Dnm1l	dynamin 1-like	0.010
Ncoa1	nuclear receptor coactivator 1	0.010
Vasp	vasodilator-stimulated phosphoprotein	0.010
Odc1	ornithine decarboxylase, structural 1	0.010
Rab10	RAB10, member RAS oncogene family	0.010
Xrcc5	X-ray repair complementing defective repair in Chinese hamster cells 5	0.010
Lin7c	lin-7 homolog C (C. elegans)	0.010