IMP: Integrative Multi-species Prediction

Mus musculus

149 genes annotated in mouse

limb morphogenesis

The process in which the anatomical structures of a limb are generated and organized. A limb is a paired appendage of a tetrapod used for locomotion or grasping.

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Known genes in the process in mouseInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "limb morphogenesis"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "limb morphogenesis" (in gray)

Name	Description	Probability	Func Analog Organism
Gli3	GLI-Kruppel family member GLI3	1.000
Pitx2	paired-like homeodomain transcription factor 2	1.000
Fgfr2	fibroblast growth factor receptor 2	1.000
Shh	sonic hedgehog	1.000
Foxc1	forkhead box C1	1.000
Bmp4	bone morphogenetic protein 4	1.000
Otx2	orthodenticle homolog 2 (Drosophila)	1.000
Pax6	paired box gene 6	1.000
Bmp7	bone morphogenetic protein 7	1.000
Pax3	paired box gene 3	1.000
Fgfr1	fibroblast growth factor receptor 1	0.999
Sox2	SRY-box containing gene 2	0.999	Mouse
Msx2	homeobox, msh-like 2	0.999
Sox9	SRY-box containing gene 9	0.999
Rarg	retinoic acid receptor, gamma	0.998
Alx4	aristaless-like homeobox 4	0.998
Hoxd11	homeobox D11	0.998
Pax2	paired box gene 2	0.998
Tbx3	T-box 3	0.998
Pbx1	pre B-cell leukemia transcription factor 1	0.997
Msx1	homeobox, msh-like 1	0.997
Hand1	heart and neural crest derivatives expressed transcript 1	0.996	Mouse
Dlx5	distal-less homeobox 5	0.996
Gli2	GLI-Kruppel family member GLI2	0.995
Prrx1	paired related homeobox 1	0.995
Hoxa11	homeobox A11	0.995
Rarb	retinoic acid receptor, beta	0.994
Smo	smoothened homolog (Drosophila)	0.994
Tgfb2	transforming growth factor, beta 2	0.994
Hoxa13	homeobox A13	0.993
Pitx1	paired-like homeodomain transcription factor 1	0.993
Ror2	receptor tyrosine kinase-like orphan receptor 2	0.993
Hoxd13	homeobox D13	0.993
Hand2	heart and neural crest derivatives expressed transcript 2	0.992
Nodal	nodal	0.991	Mouse
Prrx2	paired related homeobox 2	0.990
Foxc2	forkhead box C2	0.990
Pkd1	polycystic kidney disease 1 homolog	0.990
Sall4	sal-like 4 (Drosophila)	0.989
Rara	retinoic acid receptor, alpha	0.989	Mouse
Lhx1	LIM homeobox protein 1	0.988	Mouse
Fgf10	fibroblast growth factor 10	0.987
Gsc	goosecoid homeobox	0.986
Twist2	twist homolog 2 (Drosophila)	0.985	Mouse
Tcfap2a	transcription factor AP-2, alpha	0.984
Runx2	runt related transcription factor 2	0.981
Six1	sine oculis-related homeobox 1 homolog (Drosophila)	0.980
Wnt3a	wingless-related MMTV integration site 3A	0.979	Mouse
Col2a1	collagen, type II, alpha 1	0.976
Fgfr3	fibroblast growth factor receptor 3	0.975	Mouse
Lef1	lymphoid enhancer binding factor 1	0.974
Fgf8	fibroblast growth factor 8	0.966
Hoxa10	homeobox A10	0.963
Wnt6	wingless-related MMTV integration site 6	0.956	Mouse
Tbx15	T-box 15	0.955	Mouse
Gdf5	growth differentiation factor 5	0.950
Eya1	eyes absent 1 homolog (Drosophila)	0.945
Tbx1	T-box 1	0.941	Mouse
Lmx1b	LIM homeobox transcription factor 1 beta	0.940
Hoxa9	homeobox A9	0.938
Tbx4	T-box 4	0.936
Isl1	ISL1 transcription factor, LIM/homeodomain	0.934	Mouse
Gbx2	gastrulation brain homeobox 2	0.930
Chrd	chordin	0.930
Pax8	paired box gene 8	0.930
Pou3f3	POU domain, class 3, transcription factor 3	0.928
Nr5a1	nuclear receptor subfamily 5, group A, member 1	0.926
Twist1	twist homolog 1 (Drosophila)	0.926
Wnt5a	wingless-related MMTV integration site 5A	0.923
Fuz	fuzzy homolog (Drosophila)	0.918
Btbd17	BTB (POZ) domain containing 17	0.916
Pten	phosphatase and tensin homolog	0.916
Ret	ret proto-oncogene	0.903
Mks1	Meckel syndrome, type 1	0.903
Hoxd10	homeobox D10	0.895
Rxra	retinoid X receptor alpha	0.892
Hoxa2	homeobox A2	0.884
Zic3	zinc finger protein of the cerebellum 3	0.875
Emx1	empty spiracles homolog 1 (Drosophila)	0.869
Dkk1	dickkopf homolog 1 (Xenopus laevis)	0.869
Ascl1	achaete-scute complex homolog 1 (Drosophila)	0.861
Smad6	MAD homolog 6 (Drosophila)	0.858
Col1a1	collagen, type I, alpha 1	0.855	Mouse
Emx2	empty spiracles homolog 2 (Drosophila)	0.850
Hspg2	perlecan (heparan sulfate proteoglycan 2)	0.845
Bmpr1a	bone morphogenetic protein receptor, type 1A	0.843
Dlx1	distal-less homeobox 1	0.843	Mouse
Rspo2	R-spondin 2 homolog (Xenopus laevis)	0.834
Nog	noggin	0.834	Human
Gdf11	growth differentiation factor 11	0.834
Rbpj	recombination signal binding protein for immunoglobulin kappa J region	0.832
Efna2	ephrin A2	0.829
Sox7	SRY-box containing gene 7	0.826	Mouse
Sfrp2	secreted frizzled-related protein 2	0.819
Smad3	MAD homolog 3 (Drosophila)	0.811
Uncx	UNC homeobox	0.811
Tcf21	transcription factor 21	0.805
Pdgfra	platelet derived growth factor receptor, alpha polypeptide	0.805
Hoxa5	homeobox A5	0.803
Igdcc3	immunoglobulin superfamily, DCC subclass, member 3	0.800
Insm1	insulinoma-associated 1	0.799
Lhx3	LIM homeobox protein 3	0.799	Mouse
Foxh1	forkhead box H1	0.798
Pax9	paired box gene 9	0.793
Trp63	transformation related protein 63	0.791
Eda	ectodysplasin-A	0.788
Foxf1a	forkhead box F1a	0.787
Fgf9	fibroblast growth factor 9	0.785
Neurog2	neurogenin 2	0.774	Mouse
Foxd3	forkhead box D3	0.774
Tcfap2c	transcription factor AP-2, gamma	0.769	Mouse
Alx3	aristaless-like homeobox 3	0.766
Bmp5	bone morphogenetic protein 5	0.762	Mouse
Aldh1a2	aldehyde dehydrogenase family 1, subfamily A2	0.757
Gas1	growth arrest specific 1	0.755
Meox2	mesenchyme homeobox 2	0.754
Hoxd9	homeobox D9	0.746
Apc	adenomatosis polyposis coli	0.744
Dlx2	distal-less homeobox 2	0.742	Mouse
Wnt3	wingless-related MMTV integration site 3	0.735
Bcl2l11	BCL2-like 11 (apoptosis facilitator)	0.735
Snai1	snail homolog 1 (Drosophila)	0.732
Neurod1	neurogenic differentiation 1	0.731	Mouse
Barx1	BarH-like homeobox 1	0.710
Mecom	MDS1 and EVI1 complex locus	0.703
Zeb1	zinc finger E-box binding homeobox 1	0.699
Foxd1	forkhead box D1	0.688
Psen1	presenilin 1	0.688
Neurog1	neurogenin 1	0.680	Mouse
Bcl2	B-cell leukemia/lymphoma 2	0.671	Mouse
Ptf1a	pancreas specific transcription factor, 1a	0.670	Mouse
Mycn	v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	0.668
Sox11	SRY-box containing gene 11	0.668
Thra	thyroid hormone receptor alpha	0.667	Mouse
Fgf15	fibroblast growth factor 15	0.644
Tgfbr2	transforming growth factor, beta receptor II	0.641	Mouse
Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.640
Tcf15	transcription factor 15	0.638	Mouse
Bmpr1b	bone morphogenetic protein receptor, type 1B	0.636	Human Mouse
Nanog	Nanog homeobox	0.626
Smarcd1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	0.620
Sall3	sal-like 3 (Drosophila)	0.619
Hoxb3	homeobox B3	0.609	Mouse
Cdx2	caudal type homeobox 2	0.603
Hoxb9	homeobox B9	0.602	Mouse
Onecut1	one cut domain, family member 1	0.599
Tcfap2b	transcription factor AP-2 beta	0.596
Hoxc4	homeobox C4	0.591
T	brachyury	0.588	Mouse
Lfng	LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	0.578
Hes1	hairy and enhancer of split 1 (Drosophila)	0.578
Hoxc5	homeobox C5	0.570
Neurog3	neurogenin 3	0.559	Mouse
Sox3	SRY-box containing gene 3	0.557	Mouse
Fzd2	frizzled homolog 2 (Drosophila)	0.544	Mouse
Fbn1	fibrillin 1	0.544	Mouse
Pax7	paired box gene 7	0.543
Nkx6-1	NK6 homeobox 1	0.537
Sox17	SRY-box containing gene 17	0.536	Mouse
Myod1	myogenic differentiation 1	0.516
Ror1	receptor tyrosine kinase-like orphan receptor 1	0.515
Rem1	rad and gem related GTP binding protein 1	0.508
Gata4	GATA binding protein 4	0.507
Isl2	insulin related protein 2 (islet 2)	0.506	Mouse
Ctnnb1	catenin (cadherin associated protein), beta 1	0.503
Six3	sine oculis-related homeobox 3 homolog (Drosophila)	0.494
Hoxb1	homeobox B1	0.494
Foxf2	forkhead box F2	0.488
Grem1	gremlin 1	0.485
Fgf18	fibroblast growth factor 18	0.479	Mouse
Ddx60	DEAD (Asp-Glu-Ala-Asp) box polypeptide 60	0.479
Efna4	ephrin A4	0.478
Otx1	orthodenticle homolog 1 (Drosophila)	0.478
Col6a2	collagen, type VI, alpha 2	0.476
Foxa2	forkhead box A2	0.475
Hdac2	histone deacetylase 2	0.473
Nhlh1	nescient helix loop helix 1	0.473	Mouse
Hba-x	hemoglobin X, alpha-like embryonic chain in Hba complex	0.472
Dlx6	distal-less homeobox 6	0.469
Lhx5	LIM homeobox protein 5	0.465	Mouse
Sema6a	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	0.462
Myf5	myogenic factor 5	0.459
Gpc3	glypican 3	0.459
Notch1	Notch gene homolog 1 (Drosophila)	0.457
Gja1	gap junction protein, alpha 1	0.457
Six2	sine oculis-related homeobox 2 homolog (Drosophila)	0.456
Pcsk5	proprotein convertase subtilisin/kexin type 5	0.452
Pdx1	pancreatic and duodenal homeobox 1	0.450
Bmp2	bone morphogenetic protein 2	0.447	Mouse
Cldn6	claudin 6	0.447
Stra6	stimulated by retinoic acid gene 6	0.441
Megf8	multiple EGF-like-domains 8	0.440
Pthlh	parathyroid hormone-like peptide	0.438
Hoxa1	homeobox A1	0.434
Kcnj11	potassium inwardly rectifying channel, subfamily J, member 11	0.432
Myog	myogenin	0.430
Nkx2-2	NK2 transcription factor related, locus 2 (Drosophila)	0.426
Smpd3	sphingomyelin phosphodiesterase 3, neutral	0.424
Pou3f4	POU domain, class 3, transcription factor 4	0.423
Mesp1	mesoderm posterior 1	0.422
Fzd8	frizzled homolog 8 (Drosophila)	0.416	Mouse
Smad4	MAD homolog 4 (Drosophila)	0.414
Npr3	natriuretic peptide receptor 3	0.413
En1	engrailed 1	0.411
Efnb1	ephrin B1	0.406
Hoxd3	homeobox D3	0.405	Mouse
Msx3	homeobox, msh-like 3	0.401	Mouse
Atoh7	atonal homolog 7 (Drosophila)	0.400	Mouse
Fgf5	fibroblast growth factor 5	0.398	Mouse
Mgp	matrix Gla protein	0.395
Pou5f1	POU domain, class 5, transcription factor 1	0.392
Hmx3	H6 homeobox 3	0.392
Eln	elastin	0.389
Egfr	epidermal growth factor receptor	0.380
Foxa1	forkhead box A1	0.380
Sp1	trans-acting transcription factor 1	0.380	Mouse
Epha4	Eph receptor A4	0.379
Gdnf	glial cell line derived neurotrophic factor	0.377
Vangl2	vang-like 2 (van gogh, Drosophila)	0.377
Tbx2	T-box 2	0.375
Gnaq	guanine nucleotide binding protein, alpha q polypeptide	0.374
Wnt11	wingless-related MMTV integration site 11	0.372	Mouse
Lmx1a	LIM homeobox transcription factor 1 alpha	0.364	Mouse
Hoxa3	homeobox A3	0.364	Mouse
Ephb2	Eph receptor B2	0.363
Fgf17	fibroblast growth factor 17	0.362	Mouse
Gdf3	growth differentiation factor 3	0.359	Mouse
Hcn4	hyperpolarization-activated, cyclic nucleotide-gated K+ 4	0.359
Efs	embryonal Fyn-associated substrate	0.357
Map3k7	mitogen-activated protein kinase kinase kinase 7	0.353
Jag1	jagged 1	0.353
Phex	phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)	0.353
Rax	retina and anterior neural fold homeobox	0.349
Igf1	insulin-like growth factor 1	0.345
Sfrp1	secreted frizzled-related protein 1	0.343	Mouse
Hoxc9	homeobox C9	0.343	Mouse
Alx1	ALX homeobox 1	0.337
Fras1	Fraser syndrome 1 homolog (human)	0.336
Lrp6	low density lipoprotein receptor-related protein 6	0.335
Lhx9	LIM homeobox protein 9	0.330	Mouse
Gja3	gap junction protein, alpha 3	0.328	Mouse
Zic1	zinc finger protein of the cerebellum 1	0.327
Hoxb5	homeobox B5	0.325
Col4a2	collagen, type IV, alpha 2	0.321
Mmp14	matrix metallopeptidase 14 (membrane-inserted)	0.321
Zfp503	zinc finger protein 503	0.318
Sall1	sal-like 1 (Drosophila)	0.318
Tcfcp2l1	transcription factor CP2-like 1	0.317	Mouse
Lgr4	leucine-rich repeat-containing G protein-coupled receptor 4	0.315
Wnt4	wingless-related MMTV integration site 4	0.315	Mouse
Col11a1	collagen, type XI, alpha 1	0.314	Mouse
Hes5	hairy and enhancer of split 5 (Drosophila)	0.313
Bicc1	bicaudal C homolog 1 (Drosophila)	0.313
Foxd2	forkhead box D2	0.312
Hoxb4	homeobox B4	0.312
Hoxd4	homeobox D4	0.309
Edn3	endothelin 3	0.308
Crabp2	cellular retinoic acid binding protein II	0.306
Fgf3	fibroblast growth factor 3	0.306	Mouse
Nkx2-1	NK2 homeobox 1	0.304
Rln1	relaxin 1	0.303
Sox1	SRY-box containing gene 1	0.303
Ift88	intraflagellar transport 88 homolog (Chlamydomonas)	0.299
Mrc2	mannose receptor, C type 2	0.299
Lrp2	low density lipoprotein receptor-related protein 2	0.297	Mouse
Six6	sine oculis-related homeobox 6 homolog (Drosophila)	0.295
Hoxd1	homeobox D1	0.284
Lrp4	low density lipoprotein receptor-related protein 4	0.284
Rbl2	retinoblastoma-like 2	0.282
Msi1	Musashi homolog 1(Drosophila)	0.281
Aebp1	AE binding protein 1	0.280
Eya4	eyes absent 4 homolog (Drosophila)	0.280
Hoxb2	homeobox B2	0.279
Apcdd1	adenomatosis polyposis coli down-regulated 1	0.278
Fzd1	frizzled homolog 1 (Drosophila)	0.277	Mouse
Mapk8ip1	mitogen-activated protein kinase 8 interacting protein 1	0.277
Zic2	zinc finger protein of the cerebellum 2	0.274
Hoxc6	homeobox C6	0.272
Emid2	EMI domain containing 2	0.270
Hic1	hypermethylated in cancer 1	0.270
Meis2	Meis homeobox 2	0.269
Arhgef11	Rho guanine nucleotide exchange factor (GEF) 11	0.268
Esrrb	estrogen related receptor, beta	0.265
Bdkrb2	bradykinin receptor, beta 2	0.264
Hsd11b2	hydroxysteroid 11-beta dehydrogenase 2	0.259
Hoxb6	homeobox B6	0.259
Ep300	E1A binding protein p300	0.254
Pou3f1	POU domain, class 3, transcription factor 1	0.252
Yap1	yes-associated protein 1	0.251
Nkx2-3	NK2 transcription factor related, locus 3 (Drosophila)	0.250
Col13a1	collagen, type XIII, alpha 1	0.249
Shox2	short stature homeobox 2	0.248
Syt9	synaptotagmin IX	0.240
Aldh1a3	aldehyde dehydrogenase family 1, subfamily A3	0.239	Mouse
Nkx3-1	NK-3 transcription factor, locus 1 (Drosophila)	0.239	Mouse
Col12a1	collagen, type XII, alpha 1	0.238
Pou3f2	POU domain, class 3, transcription factor 2	0.238
Nes	nestin	0.237
Wdr19	WD repeat domain 19	0.236
Maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	0.235
Irx1	Iroquois related homeobox 1 (Drosophila)	0.234
Sin3a	transcriptional regulator, SIN3A (yeast)	0.233
Cdx1	caudal type homeobox 1	0.233
Crlf1	cytokine receptor-like factor 1	0.233
Pou4f2	POU domain, class 4, transcription factor 2	0.233
Adra2a	adrenergic receptor, alpha 2a	0.233
Hapln1	hyaluronan and proteoglycan link protein 1	0.229
Foxo3	forkhead box O3	0.227
Prph2	peripherin 2	0.226
Dicer1	Dicer1, Dcr-1 homolog (Drosophila)	0.226
Lrp5	low density lipoprotein receptor-related protein 5	0.224
Hoxa4	homeobox A4	0.224
Krt72-ps	keratin 72, pseudogene	0.222
Wt1	Wilms tumor 1 homolog	0.221
App	amyloid beta (A4) precursor protein	0.218
Meis3	Meis homeobox 3	0.218
Rbl1	retinoblastoma-like 1 (p107)	0.213
Six4	sine oculis-related homeobox 4 homolog (Drosophila)	0.213
Acvr2b	activin receptor IIB	0.212
Col6a1	collagen, type VI, alpha 1	0.211
Kitl	kit ligand	0.210
Vegfa	vascular endothelial growth factor A	0.209
Adra2b	adrenergic receptor, alpha 2b	0.209
Slc16a8	solute carrier family 16 (monocarboxylic acid transporters), member 8	0.206
Pkd2	polycystic kidney disease 2	0.206
Col5a2	collagen, type V, alpha 2	0.205	Mouse
Pitx3	paired-like homeodomain transcription factor 3	0.205	Mouse
Ntf3	neurotrophin 3	0.204
Gja8	gap junction protein, alpha 8	0.204	Mouse
Ncoa3	nuclear receptor coactivator 3	0.203
Cdon	cell adhesion molecule-related/down-regulated by oncogenes	0.203
Gdf10	growth differentiation factor 10	0.202	Mouse
Hoxd8	homeobox D8	0.202
Jag2	jagged 2	0.202
Dvl3	dishevelled 3, dsh homolog (Drosophila)	0.201
Chd7	chromodomain helicase DNA binding protein 7	0.201
Islr	immunoglobulin superfamily containing leucine-rich repeat	0.201
Cer1	cerberus 1 homolog (Xenopus laevis)	0.197	Mouse
Chrna7	cholinergic receptor, nicotinic, alpha polypeptide 7	0.196
Wisp1	WNT1 inducible signaling pathway protein 1	0.196
Mll1	myeloid/lymphoid or mixed-lineage leukemia 1	0.196
Zic4	zinc finger protein of the cerebellum 4	0.195
Tecta	tectorin alpha	0.195
Ldlr	low density lipoprotein receptor	0.194
Kel	Kell blood group	0.194
S100a3	S100 calcium binding protein A3	0.194
Gjb5	gap junction protein, beta 5	0.193	Mouse
Cdk5r2	cyclin-dependent kinase 5, regulatory subunit 2 (p39)	0.192
Zp3	zona pellucida glycoprotein 3	0.192
Inhba	inhibin beta-A	0.191
Nos3	nitric oxide synthase 3, endothelial cell	0.191
Prph	peripherin	0.191
Gata3	GATA binding protein 3	0.190
Padi3	peptidyl arginine deiminase, type III	0.189
Dlk1	delta-like 1 homolog (Drosophila)	0.187
a	nonagouti	0.187
Tal2	T-cell acute lymphocytic leukemia 2	0.186	Mouse
Zfhx3	zinc finger homeobox 3	0.185
Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	0.184
Alkbh1	alkB, alkylation repair homolog 1 (E. coli)	0.183
Fzd7	frizzled homolog 7 (Drosophila)	0.183	Mouse
Lbx1	ladybird homeobox homolog 1 (Drosophila)	0.183
Osr1	odd-skipped related 1 (Drosophila)	0.182
Edar	ectodysplasin-A receptor	0.180
Cdkn2a	cyclin-dependent kinase inhibitor 2A	0.179
Thrb	thyroid hormone receptor beta	0.179	Mouse
Gata6	GATA binding protein 6	0.178
Arid1a	AT rich interactive domain 1A (SWI-like)	0.177
Axin2	axin2	0.177
Grip1	glutamate receptor interacting protein 1	0.176
Hoxa7	homeobox A7	0.176
Fstl1	follistatin-like 1	0.175
Arx	aristaless related homeobox	0.174	Mouse
Atp2a1	ATPase, Ca++ transporting, cardiac muscle, fast twitch 1	0.174
Neurod4	neurogenic differentiation 4	0.173	Mouse
Tead4	TEA domain family member 4	0.172
Hmx1	H6 homeobox 1	0.171
Gpha2	glycoprotein hormone alpha 2	0.170
Col4a1	collagen, type IV, alpha 1	0.168
Sp3	trans-acting transcription factor 3	0.166	Mouse
Oprd1	opioid receptor, delta 1	0.166
Fgfbp1	fibroblast growth factor binding protein 1	0.166
Hnf1b	HNF1 homeobox B	0.165	Mouse
Rfx2	regulatory factor X, 2 (influences HLA class II expression)	0.164
Tnnt3	troponin T3, skeletal, fast	0.162
Hoxb7	homeobox B7	0.162
Crygd	crystallin, gamma D	0.160
Frem1	Fras1 related extracellular matrix protein 1	0.160	Mouse
Insm2	insulinoma-associated 2	0.159
Mnx1	motor neuron and pancreas homeobox 1	0.158
Wnt1	wingless-related MMTV integration site 1	0.158	Mouse
Scrt2	scratch homolog 2, zinc finger protein (Drosophila)	0.158
Nppc	natriuretic peptide type C	0.157
Satb2	special AT-rich sequence binding protein 2	0.156
Bfsp1	beaded filament structural protein 1, in lens-CP94	0.153
Myl2	myosin, light polypeptide 2, regulatory, cardiac, slow	0.152
Tshz1	teashirt zinc finger family member 1	0.152
Il11	interleukin 11	0.151
Ptch2	patched homolog 2	0.151	Mouse
Krt17	keratin 17	0.151
Kcne1l	potassium voltage-gated channel, Isk-related family, member 1-like, pseudogene	0.151
Dll1	delta-like 1 (Drosophila)	0.151
Eomes	eomesodermin homolog (Xenopus laevis)	0.150	Mouse
Pth1r	parathyroid hormone 1 receptor	0.149
Ednra	endothelin receptor type A	0.149
Sox21	SRY-box containing gene 21	0.148
Evx1	even skipped homeotic gene 1 homolog	0.148	Mouse
Psen2	presenilin 2	0.148
Magel2	melanoma antigen, family L, 2	0.148
Sox4	SRY-box containing gene 4	0.147
Capn6	calpain 6	0.147
Tlx2	T-cell leukemia, homeobox 2	0.147
Gsx2	GS homeobox 2	0.147	Mouse
Etv4	ets variant gene 4 (E1A enhancer binding protein, E1AF)	0.146	Zebrafish
Mfap2	microfibrillar-associated protein 2	0.146
Myf6	myogenic factor 6	0.145
Tgfb1	transforming growth factor, beta 1	0.145
Gopc	golgi associated PDZ and coiled-coil motif containing	0.144
Ebf3	early B-cell factor 3	0.144
Ptk7	PTK7 protein tyrosine kinase 7	0.144
Ptpn14	protein tyrosine phosphatase, non-receptor type 14	0.144
Ncor2	nuclear receptor co-repressor 2	0.142
Npr1	natriuretic peptide receptor 1	0.142
Igfbpl1	insulin-like growth factor binding protein-like 1	0.141
Fev	FEV (ETS oncogene family)	0.141
Scn5a	sodium channel, voltage-gated, type V, alpha	0.141
5730559C18Rik	RIKEN cDNA 5730559C18 gene	0.140
Mgat3	mannoside acetylglucosaminyltransferase 3	0.138
Pou4f3	POU domain, class 4, transcription factor 3	0.138
Bmper	BMP-binding endothelial regulator	0.138
Kdm6a	4lysine (K)-specific demethylase 6A	0.137
Cdc42	cell division cycle 42 homolog (S. cerevisiae)	0.135
Tgfbr3	transforming growth factor, beta receptor III	0.135
Lama1	laminin, alpha 1	0.135
Nkx1-2	NK1 transcription factor related, locus 2 (Drosophila)	0.134
Cachd1	cache domain containing 1	0.134
Ptch1	patched homolog 1	0.133
Frem2	Fras1 related extracellular matrix protein 2	0.133	Mouse
Hes3	hairy and enhancer of split 3 (Drosophila)	0.133
Nrk	Nik related kinase	0.133
Arhgef12	Rho guanine nucleotide exchange factor (GEF) 12	0.133
Tead2	TEA domain family member 2	0.132
Irx2	Iroquois related homeobox 2 (Drosophila)	0.131
Barx2	BarH-like homeobox 2	0.131
Acan	aggrecan	0.130
Eng	endoglin	0.130
Kcnj4	potassium inwardly-rectifying channel, subfamily J, member 4	0.130
Calca	calcitonin/calcitonin-related polypeptide, alpha	0.129
Ext1	exostoses (multiple) 1	0.128
Hesx1	homeobox gene expressed in ES cells	0.127
Foxe3	forkhead box E3	0.126
Slc16a2	solute carrier family 16 (monocarboxylic acid transporters), member 2	0.126
Cdk5r1	cyclin-dependent kinase 5, regulatory subunit 1 (p35)	0.125
Notch3	Notch gene homolog 3 (Drosophila)	0.125	Mouse
Dab1	disabled homolog 1 (Drosophila)	0.125
Zfp703	zinc finger protein 703	0.124
Ptx3	pentraxin related gene	0.124
Chuk	conserved helix-loop-helix ubiquitous kinase	0.124
Hoxc10	homeobox C10	0.124
Mmp24	matrix metallopeptidase 24	0.123
Musk	muscle, skeletal, receptor tyrosine kinase	0.123
Cited1	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1	0.123
Slc26a5	solute carrier family 26, member 5	0.123
Mab21l1	mab-21-like 1 (C. elegans)	0.123
Smad1	MAD homolog 1 (Drosophila)	0.123
Hoxc8	homeobox C8	0.123
Efemp2	epidermal growth factor-containing fibulin-like extracellular matrix protein 2	0.121
Hdac1	histone deacetylase 1	0.121
Mybph	myosin binding protein H	0.121
Dach1	dachshund 1 (Drosophila)	0.120
Duox2	dual oxidase 2	0.120
Mecp2	methyl CpG binding protein 2	0.120
Steap3	STEAP family member 3	0.120
Sdc3	syndecan 3	0.119
Sema3a	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	0.119
Ptp4a2	protein tyrosine phosphatase 4a2	0.118
Sult5a1	sulfotransferase family 5A, member 1	0.118
Wnt9a	wingless-type MMTV integration site 9A	0.118
Cfc1	cripto, FRL-1, cryptic family 1	0.118
Zfp316	zinc finger protein 316	0.118
Myt1	myelin transcription factor 1	0.117
Lox	lysyl oxidase	0.116
Gli1	GLI-Kruppel family member GLI1	0.116	Mouse
Sox13	SRY-box containing gene 13	0.115
Stk3	serine/threonine kinase 3 (Ste20, yeast homolog)	0.115
Id4	inhibitor of DNA binding 4	0.115
Zfpm2	zinc finger protein, multitype 2	0.115
Dlx3	distal-less homeobox 3	0.114	Mouse
Ncor1	nuclear receptor co-repressor 1	0.114
Dnase1l2	deoxyribonuclease 1-like 2	0.114
Wnt9b	wingless-type MMTV integration site 9B	0.113	Mouse
Slc27a3	solute carrier family 27 (fatty acid transporter), member 3	0.112
Col8a1	collagen, type VIII, alpha 1	0.112
Mfap4	microfibrillar-associated protein 4	0.112
Notch2	Notch gene homolog 2 (Drosophila)	0.111
Col15a1	collagen, type XV, alpha 1	0.111
Tpbg	trophoblast glycoprotein	0.111
Gjb2	gap junction protein, beta 2	0.111	Mouse
Fzd4	frizzled homolog 4 (Drosophila)	0.111	Mouse
Ceacam16	carcinoembryonic antigen-related cell adhesion molecule 16	0.111
Sp7	Sp7 transcription factor 7	0.111
Pou2f2	POU domain, class 2, transcription factor 2	0.110
Socs1	suppressor of cytokine signaling 1	0.110
Serpinh1	serine (or cysteine) peptidase inhibitor, clade H, member 1	0.110
Srpx	sushi-repeat-containing protein	0.109
Acvr1	activin A receptor, type 1	0.109	Mouse
Epha2	Eph receptor A2	0.106
Tcf7l1	transcription factor 7-like 1 (T-cell specific, HMG box)	0.105	Mouse
Zfhx4	zinc finger homeodomain 4	0.105
Npas1	neuronal PAS domain protein 1	0.105
Meis1	Meis homeobox 1	0.105
Rgnef	Rho-guanine nucleotide exchange factor	0.105
Fbln1	fibulin 1	0.104
Cxcl12	chemokine (C-X-C motif) ligand 12	0.103
Fgf2	fibroblast growth factor 2	0.103	Mouse
Bnc1	basonuclin 1	0.103
Clca3	chloride channel calcium activated 3	0.103
Mesp2	mesoderm posterior 2	0.103
Cpxm1	carboxypeptidase X 1 (M14 family)	0.102
Bmf	BCL2 modifying factor	0.102
Fzd6	frizzled homolog 6 (Drosophila)	0.102
Atp7a	ATPase, Cu++ transporting, alpha polypeptide	0.102
Dcc	deleted in colorectal carcinoma	0.102
Fosl2	fos-like antigen 2	0.102
Pdpk1	3-phosphoinositide dependent protein kinase 1	0.101
Pmaip1	phorbol-12-myristate-13-acetate-induced protein 1	0.101
Rdh10	retinol dehydrogenase 10 (all-trans)	0.101
Usp43	ubiquitin specific peptidase 43	0.101
Dmrt1	doublesex and mab-3 related transcription factor 1	0.100
Zfp358	zinc finger protein 358	0.099
Mpv17	MpV17 mitochondrial inner membrane protein	0.099
Lrrn1	leucine rich repeat protein 1, neuronal	0.099
Wnt2b	wingless related MMTV integration site 2b	0.099	Mouse
Tll1	tolloid-like	0.099
Smoc2	SPARC related modular calcium binding 2	0.099
Hhip	Hedgehog-interacting protein	0.098
Nkx2-9	NK2 transcription factor related, locus 9 (Drosophila)	0.097
Cdkn2d	cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	0.097
Wnt5b	wingless-related MMTV integration site 5B	0.097	Mouse
Rhbdl3	rhomboid, veinlet-like 3 (Drosophila)	0.096
Pcolce	procollagen C-endopeptidase enhancer protein	0.096
Kit	kit oncogene	0.096
Sspo	SCO-spondin	0.096
Odz2	odd Oz/ten-m homolog 2 (Drosophila)	0.096
Vdr	vitamin D receptor	0.095
Lif	leukemia inhibitory factor	0.095
Cbx2	chromobox homolog 2 (Drosophila Pc class)	0.095
Otos	otospiralin	0.095
Trp53	transformation related protein 53	0.095	Mouse
Mitf	microphthalmia-associated transcription factor	0.095
Pml	promyelocytic leukemia	0.095
Ptprb	protein tyrosine phosphatase, receptor type, B	0.095
Hoxb13	homeobox B13	0.095	Mouse
Sod3	superoxide dismutase 3, extracellular	0.095
Olig2	oligodendrocyte transcription factor 2	0.094
Irs2	insulin receptor substrate 2	0.094
Plcd1	phospholipase C, delta 1	0.094
Mmp16	matrix metallopeptidase 16	0.093
Kremen1	kringle containing transmembrane protein 1	0.093
Nrp1	neuropilin 1	0.093
Bach1	BTB and CNC homology 1	0.093
Inhbb	inhibin beta-B	0.093
Tef	thyrotroph embryonic factor	0.093
Sufu	suppressor of fused homolog (Drosophila)	0.093
Sema5b	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B	0.092
Bmp1	bone morphogenetic protein 1	0.092
Gast	gastrin	0.091
Adamts7	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7	0.091
Mcl1	myeloid cell leukemia sequence 1	0.091	Mouse
She	src homology 2 domain-containing transforming protein E	0.091
Csf3	colony stimulating factor 3 (granulocyte)	0.091
Invs	inversin	0.091
Nr2e1	nuclear receptor subfamily 2, group E, member 1	0.091
Chrna3	cholinergic receptor, nicotinic, alpha polypeptide 3	0.091
Robo1	roundabout homolog 1 (Drosophila)	0.091
Col7a1	collagen, type VII, alpha 1	0.091
Otp	orthopedia homolog (Drosophila)	0.090
Clcnka	chloride channel Ka	0.090
Adam12	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	0.090
Slc7a2	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	0.090
Rest	RE1-silencing transcription factor	0.090
Lpar1	lysophosphatidic acid receptor 1	0.090
Sim2	single-minded homolog 2 (Drosophila)	0.089
Pax1	paired box gene 1	0.089
Col6a3	collagen, type VI, alpha 3	0.088
Lefty1	left right determination factor 1	0.088
Cdh3	cadherin 3	0.087
Ssbp3	single-stranded DNA binding protein 3	0.087
Foxg1	forkhead box G1	0.087
Igfbp4	insulin-like growth factor binding protein 4	0.087
Fzd10	frizzled homolog 10 (Drosophila)	0.087
Kcnn1	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1	0.087
Mll5	myeloid/lymphoid or mixed-lineage leukemia 5	0.087
Igf2bp1	insulin-like growth factor 2 mRNA binding protein 1	0.086
Bbc3	BCL2 binding component 3	0.086
Ift122	intraflagellar transport 122 homolog (Chlamydomonas)	0.086
Dact1	dapper homolog 1, antagonist of beta-catenin (xenopus)	0.086
Irx3	Iroquois related homeobox 3 (Drosophila)	0.086
Glra1	glycine receptor, alpha 1 subunit	0.085
Smarcc1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	0.085
Trove2	TROVE domain family, member 2	0.085
Bmp8b	bone morphogenetic protein 8b	0.084	Mouse
Nfib	nuclear factor I/B	0.084
Arid1b	AT rich interactive domain 1B (SWI-like)	0.084
Rora	RAR-related orphan receptor alpha	0.084
St8sia2	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	0.084
Hhat	hedgehog acyltransferase	0.084
Hif3a	hypoxia inducible factor 3, alpha subunit	0.084
Cxcr4	chemokine (C-X-C motif) receptor 4	0.084
Runx3	runt related transcription factor 3	0.083	Mouse
Epha5	Eph receptor A5	0.083
Hmga2	high mobility group AT-hook 2	0.083
Gpr50	G-protein-coupled receptor 50	0.083
Bmp15	bone morphogenetic protein 15	0.083	Mouse
Smarcb1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	0.083
Sp8	trans-acting transcription factor 8	0.083
Crebbp	CREB binding protein	0.083
Krt16	keratin 16	0.082
Hs3st3b1	heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	0.082
Atoh1	atonal homolog 1 (Drosophila)	0.081	Mouse
Tcf7l2	transcription factor 7-like 2, T-cell specific, HMG-box	0.081	Mouse
Tnfrsf19	tumor necrosis factor receptor superfamily, member 19	0.081
Pkdcc	protein kinase domain containing, cytoplasmic	0.081
Onecut2	one cut domain, family member 2	0.081
Col4a5	collagen, type IV, alpha 5	0.081
Arnt2	aryl hydrocarbon receptor nuclear translocator 2	0.081
Igfbp2	insulin-like growth factor binding protein 2	0.080
Kl	klotho	0.080
Matn3	matrilin 3	0.080
Rprm	reprimo, TP53 dependent G2 arrest mediator candidate	0.080
Cacna2d1	calcium channel, voltage-dependent, alpha2/delta subunit 1	0.080
Ar	androgen receptor	0.080
Crx	cone-rod homeobox containing gene	0.080
Msmb	beta-microseminoprotein	0.080
Epas1	endothelial PAS domain protein 1	0.080
Greb1	gene regulated by estrogen in breast cancer protein	0.079
Dhh	desert hedgehog	0.079	Mouse
C1ql1	complement component 1, q subcomponent-like 1	0.079
Prx	periaxin	0.079
Abca4	ATP-binding cassette, sub-family A (ABC1), member 4	0.079
Nr0b1	nuclear receptor subfamily 0, group B, member 1	0.079
Smarcc2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	0.079
Rgma	RGM domain family, member A	0.078
Ebf2	early B-cell factor 2	0.078
Zfp362	zinc finger protein 362	0.078
Itga5	integrin alpha 5 (fibronectin receptor alpha)	0.078
Ptpru	protein tyrosine phosphatase, receptor type, U	0.078
Cdh6	cadherin 6	0.077
Col3a1	collagen, type III, alpha 1	0.077	Mouse
Ntsr1	neurotensin receptor 1	0.077
Tnfsf11	tumor necrosis factor (ligand) superfamily, member 11	0.076
Prlr	prolactin receptor	0.076
Mdk	midkine	0.076
Aif1l	allograft inflammatory factor 1-like	0.076
B9d2	B9 protein domain 2	0.076
Fam20c	family with sequence similarity 20, member C	0.075
Trim8	tripartite motif-containing 8	0.075
Mib1	mindbomb homolog 1 (Drosophila)	0.075
Foxq1	forkhead box Q1	0.075
Nobox	NOBOX oogenesis homeobox	0.075
Krt35	keratin 35	0.075
Mafb	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)	0.075
Gjc2	gap junction protein, gamma 2	0.075	Mouse
Erbb4	v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	0.075
Igfbp1	insulin-like growth factor binding protein 1	0.075
Pdgfrb	platelet derived growth factor receptor, beta polypeptide	0.074
Mdm4	transformed mouse 3T3 cell double minute 4	0.074
Tacr2	tachykinin receptor 2	0.074
Tgfb1i1	transforming growth factor beta 1 induced transcript 1	0.074
Cacng1	calcium channel, voltage-dependent, gamma subunit 1	0.074
Lrrc58	leucine rich repeat containing 58	0.074
Cd248	CD248 antigen, endosialin	0.074
Aff1	AF4/FMR2 family, member 1	0.073
Gpr3	G-protein coupled receptor 3	0.073
Vax1	ventral anterior homeobox containing gene 1	0.073
Chrm4	cholinergic receptor, muscarinic 4	0.073
Ptgdr	prostaglandin D receptor	0.072
Col9a1	collagen, type IX, alpha 1	0.072
Dll4	delta-like 4 (Drosophila)	0.072
Cebpa	CCAAT/enhancer binding protein (C/EBP), alpha	0.072
Grb10	growth factor receptor bound protein 10	0.071
Pcsk6	proprotein convertase subtilisin/kexin type 6	0.071	Mouse
Tal1	T-cell acute lymphocytic leukemia 1	0.071	Mouse
Ggt1	gamma-glutamyltransferase 1	0.071
Fzd9	frizzled homolog 9 (Drosophila)	0.071	Mouse
Nptx2	neuronal pentraxin 2	0.071
Wnt7a	wingless-related MMTV integration site 7A	0.071
Gjd2	gap junction protein, delta 2	0.070	Mouse
Igfbp5	insulin-like growth factor binding protein 5	0.070
Rlbp1	retinaldehyde binding protein 1	0.070
Gfra1	glial cell line derived neurotrophic factor family receptor alpha 1	0.070
Dbp	D site albumin promoter binding protein	0.070
Gpsm3	G-protein signalling modulator 3 (AGS3-like, C. elegans)	0.070
Colq	collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	0.070
Cyp26a1	cytochrome P450, family 26, subfamily a, polypeptide 1	0.070	Mouse
Dbx1	developing brain homeobox 1	0.069
Foxb2	forkhead box B2	0.069
Ly6g6d	lymphocyte antigen 6 complex, locus G6D	0.069
Ptn	pleiotrophin	0.069
Nfia	nuclear factor I/A	0.069
Rassf10	Ras association (RalGDS/AF-6) domain family (N-terminal) member 10	0.069
Fhl3	four and a half LIM domains 3	0.069
Gad2	glutamic acid decarboxylase 2	0.068
Gcg	glucagon	0.068
Ppard	peroxisome proliferator activator receptor delta	0.068
Map4k2	mitogen-activated protein kinase kinase kinase kinase 2	0.068
Fgf23	fibroblast growth factor 23	0.068
Cnot6l	CCR4-NOT transcription complex, subunit 6-like	0.068
Trim25	tripartite motif-containing 25	0.068
Fjx1	four jointed box 1 (Drosophila)	0.067
Wnt7b	wingless-related MMTV integration site 7B	0.067	Mouse
Sox10	SRY-box containing gene 10	0.067	Mouse
Cdh15	cadherin 15	0.067
Ntn1	netrin 1	0.067
Oc90	otoconin 90	0.067
Hoxd12	homeobox D12	0.067
Pcgf2	polycomb group ring finger 2	0.067
Foxj1	forkhead box J1	0.066
Tlx3	T-cell leukemia, homeobox 3	0.066
Ibsp	integrin binding sialoprotein	0.066
Pou4f1	POU domain, class 4, transcription factor 1	0.066
Galr2	galanin receptor 2	0.066
Prdm16	PR domain containing 16	0.066	Mouse
Foxa3	forkhead box A3	0.066
Pofut1	protein O-fucosyltransferase 1	0.066
Midn	midnolin	0.065
Cmklr1	chemokine-like receptor 1	0.065
Grid1	glutamate receptor, ionotropic, delta 1	0.065
Thbs3	thrombospondin 3	0.065
Zbtb16	zinc finger and BTB domain containing 16	0.065
Tmeff2	transmembrane protein with EGF-like and two follistatin-like domains 2	0.065
Unc93b1	unc-93 homolog B1 (C. elegans)	0.065
Igfbp3	insulin-like growth factor binding protein 3	0.065
Slc22a6	solute carrier family 22 (organic anion transporter), member 6	0.065
Tlx1	T-cell leukemia, homeobox 1	0.065
Fut1	fucosyltransferase 1	0.065
Hoxa6	homeobox A6	0.065
Il25	interleukin 25	0.065
Irx4	Iroquois related homeobox 4 (Drosophila)	0.064
Bmp8a	bone morphogenetic protein 8a	0.064	Mouse
Hbb-bh1	hemoglobin Z, beta-like embryonic chain	0.064
Mpp5	membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	0.064
Has2	hyaluronan synthase 2	0.064
Tcf7	transcription factor 7, T-cell specific	0.064	Mouse
Gipc3	GIPC PDZ domain containing family, member 3	0.064
Cbln1	cerebellin 1 precursor protein	0.064
Cacng4	calcium channel, voltage-dependent, gamma subunit 4	0.063
Acvr2a	activin receptor IIA	0.063
Col22a1	collagen, type XXII, alpha 1	0.063
Crabp1	cellular retinoic acid binding protein I	0.063	Mouse