IMP: Integrative Multi-species Prediction

Mus musculus

1 genes annotated in mouse

maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna

Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna "

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "maturation of 5 8s rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna " (in gray)

Name	Description	Probability	Func Analog Organism
Gnl3	guanine nucleotide binding protein-like 3 (nucleolar)	0.983
Eed	embryonic ectoderm development	0.981
Mybbp1a	MYB binding protein (P160) 1a	0.937
Ftsj3	FtsJ homolog 3 (E. coli)	0.921
Nsun2	NOL1/NOP2/Sun domain family member 2	0.899
Rrp15	ribosomal RNA processing 15 homolog (S. cerevisiae)	0.842
Ddx21	DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	0.839
Utp20	UTP20, small subunit (SSU) processome component, homolog (yeast)	0.825
D19Bwg1357e	DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	0.792
Nop56	NOP56 ribonucleoprotein homolog (yeast)	0.738
Rrp12	ribosomal RNA processing 12 homolog (S. cerevisiae)	0.734
Ccdc86	coiled-coil domain containing 86	0.656
Nop2	NOP2 nucleolar protein homolog (yeast)	0.626
Mki67ip	Mki67 (FHA domain) interacting nucleolar phosphoprotein	0.544
Ddx10	DEAD (Asp-Glu-Ala-Asp) box polypeptide 10	0.539
Wdr43	WD repeat domain 43	0.527
Dcaf13	DDB1 and CUL4 associated factor 13	0.485
Grwd1	glutamate-rich WD repeat containing 1	0.482
Wdr46	WD repeat domain 46	0.450	Yeast
Pwp2	PWP2 periodic tryptophan protein homolog (yeast)	0.400	Yeast
Wdr74	WD repeat domain 74	0.395
Cebpz	CCAAT/enhancer binding protein zeta	0.288
Brix1	BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)	0.288
Gpatch4	G patch domain containing 4	0.281
Nip7	nuclear import 7 homolog (S. cerevisiae)	0.246
Pus1	pseudouridine synthase 1	0.237
Nolc1	nucleolar and coiled-body phosphoprotein 1	0.228
Tars	threonyl-tRNA synthetase	0.224
Ssb	Sjogren syndrome antigen B	0.220
Wdr55	WD repeat domain 55	0.219
Spata5	spermatogenesis associated 5	0.218
Hsp90aa1	heat shock protein 90, alpha (cytosolic), class A member 1	0.213
Rrs1	RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	0.207
Rbm19	RNA binding motif protein 19	0.197	Yeast
Pprc1	peroxisome proliferative activated receptor, gamma, coactivator-related 1	0.192
Dus1l	dihydrouridine synthase 1-like (S. cerevisiae)	0.182
Nop16	NOP16 nucleolar protein homolog (yeast)	0.177
Aatf	apoptosis antagonizing transcription factor	0.161
Tsr1	TSR1, 20S rRNA accumulation, homolog (yeast)	0.142
Gnl2	guanine nucleotide binding protein-like 2 (nucleolar)	0.142
Ltv1	LTV1 homolog (S. cerevisiae)	0.140
Gar1	GAR1 ribonucleoprotein homolog (yeast)	0.139
Tars2	threonyl-tRNA synthetase 2, mitochondrial (putative)	0.138
Nop14	NOP14 nucleolar protein homolog (yeast)	0.138
Lsg1	large subunit GTPase 1 homolog (S. cerevisiae)	0.135
Srm	spermidine synthase	0.133
Dkc1	dyskeratosis congenita 1, dyskerin homolog (human)	0.133
Pdcd11	programmed cell death 11	0.127	Yeast
Mak16	MAK16 homolog (S. cerevisiae)	0.125
Elac2	elaC homolog 2 (E. coli)	0.122
2610027L16Rik	RIKEN cDNA 2610027L16 gene	0.118
Mphosph10	M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	0.115
Ddx18	DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	0.110
Dnajc2	DnaJ (Hsp40) homolog, subfamily C, member 2	0.103
Nubp1	nucleotide binding protein 1	0.102
Hnrnpa1	heterogeneous nuclear ribonucleoprotein A1	0.099
Gtf2f1	general transcription factor IIF, polypeptide 1	0.098
Ppan	peter pan homolog (Drosophila)	0.096
Zfp259	zinc finger protein 259	0.096
Fbl	fibrillarin	0.094
Msh6	mutS homolog 6 (E. coli)	0.090
Ddx56	DEAD (Asp-Glu-Ala-Asp) box polypeptide 56	0.086
Fam203a	family with sequence similarity 203, member A	0.083
Nufip1	nuclear fragile X mental retardation protein interacting protein 1	0.082
Morc3	microrchidia 3	0.082
Cpsf2	cleavage and polyadenylation specific factor 2	0.079
Ttc27	tetratricopeptide repeat domain 27	0.079
Nup155	nucleoporin 155	0.077
Tsn	translin	0.076
Ipo4	importin 4	0.074
Bysl	bystin-like	0.073
Rrp1b	ribosomal RNA processing 1 homolog B (S. cerevisiae)	0.073
Ddx51	DEAD (Asp-Glu-Ala-Asp) box polypeptide 51	0.072	Yeast
Nol11	nucleolar protein 11	0.070
Smyd5	SET and MYND domain containing 5	0.069
Rnaseh1	ribonuclease H1	0.068
Dph5	DPH5 homolog (S. cerevisiae)	0.068
Cirh1a	cirrhosis, autosomal recessive 1A (human)	0.067
Gart	phosphoribosylglycinamide formyltransferase	0.064
Noc4l	nucleolar complex associated 4 homolog (S. cerevisiae)	0.063
Dis3	DIS3 mitotic control homolog (S. cerevisiae)	0.060
Rcl1	RNA terminal phosphate cyclase-like 1	0.060
Rbm8a	RNA binding motif protein 8a	0.060
Ebna1bp2	EBNA1 binding protein 2	0.058
D10Wsu102e	DNA segment, Chr 10, Wayne State University 102, expressed	0.057
Surf6	surfeit gene 6	0.056
Dnttip2	deoxynucleotidyltransferase, terminal, interacting protein 2	0.054
Exosc10	exosome component 10	0.052
Xrn2	5'-3' exoribonuclease 2	0.051
Eif3d	eukaryotic translation initiation factor 3, subunit D	0.049
Sdad1	SDA1 domain containing 1	0.049
Orc2	origin recognition complex, subunit 2	0.049
Eif2s1	eukaryotic translation initiation factor 2, subunit 1 alpha	0.048
Rsl1d1	ribosomal L1 domain containing 1	0.047
Utp14a	UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	0.046
Cct8	chaperonin containing Tcp1, subunit 8 (theta)	0.045
Hnrnpu	heterogeneous nuclear ribonucleoprotein U	0.045
Phax	phosphorylated adaptor for RNA export	0.042
Heatr1	HEAT repeat containing 1	0.041
Igh	immunoglobulin heavy chain complex	0.039
Bms1	BMS1 homolog, ribosome assembly protein (yeast)	0.038
Hnrnpab	heterogeneous nuclear ribonucleoprotein A/B	0.036
Ccar1	cell division cycle and apoptosis regulator 1	0.036
Rars	arginyl-tRNA synthetase	0.036
Wdr36	WD repeat domain 36	0.035
Wdr75	WD repeat domain 75	0.035
Abcf1	ATP-binding cassette, sub-family F (GCN20), member 1	0.033
Ddx20	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	0.033
Mettl1	methyltransferase like 1	0.033
Pus7l	pseudouridylate synthase 7 homolog (S. cerevisiae)-like	0.033
Aen	apoptosis enhancing nuclease	0.033
Wdr3	WD repeat domain 3	0.033	Yeast
Noc3l	nucleolar complex associated 3 homolog (S. cerevisiae)	0.032
4933424B01Rik	RIKEN cDNA 4933424B01 gene	0.032
Cct2	chaperonin containing Tcp1, subunit 2 (beta)	0.032
Gtf2h2	general transcription factor II H, polypeptide 2	0.032
Isg20l2	interferon stimulated exonuclease gene 20-like 2	0.032
Vps16	vacuolar protein sorting 16 (yeast)	0.031
Prpf3	PRP3 pre-mRNA processing factor 3 homolog (yeast)	0.031
Suz12	suppressor of zeste 12 homolog (Drosophila)	0.030
Tbrg4	transforming growth factor beta regulated gene 4	0.029
Nmd3	NMD3 homolog (S. cerevisiae)	0.028
Setx	senataxin	0.028
Atp13a1	ATPase type 13A1	0.028
Rcc1	regulator of chromosome condensation 1	0.027
Wdr5	WD repeat domain 5	0.027
Wbscr16	Williams-Beuren syndrome chromosome region 16 homolog (human)	0.027
Ctdp1	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	0.027
Nvl	nuclear VCP-like	0.026
Utp15	UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast)	0.026
Rpf2	ribosome production factor 2 homolog (S. cerevisiae)	0.026	Yeast
Srsf7	serine/arginine-rich splicing factor 7	0.025
Polr1e	polymerase (RNA) I polypeptide E	0.025
Nop58	NOP58 ribonucleoprotein homolog (yeast)	0.025	Yeast
Dph2	DPH2 homolog (S. cerevisiae)	0.025
Tfip11	tuftelin interacting protein 11	0.024
Sf3b3	splicing factor 3b, subunit 3	0.024
Exosc1	exosome component 1	0.024
Utp6	UTP6, small subunit (SSU) processome component, homolog (yeast)	0.024
Cct6a	chaperonin containing Tcp1, subunit 6a (zeta)	0.024
Xpo5	exportin 5	0.024
Ruvbl1	RuvB-like protein 1	0.024
Gtpbp4	GTP binding protein 4	0.024
Dhx16	DEAH (Asp-Glu-Ala-His) box polypeptide 16	0.023
Ncbp1	nuclear cap binding protein subunit 1	0.023
Atad3a	ATPase family, AAA domain containing 3A	0.023
Thoc5	THO complex 5	0.023
Rnmtl1	RNA methyltransferase like 1	0.023
Rrp36	ribosomal RNA processing 36 homolog (S. cerevisiae)	0.023
Eif1a	eukaryotic translation initiation factor 1A	0.023
BC027231	cDNA sequence BC027231	0.022
Psmc1	protease (prosome, macropain) 26S subunit, ATPase 1	0.022
Las1l	LAS1-like (S. cerevisiae)	0.022
Smu1	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	0.022
Polr3a	polymerase (RNA) III (DNA directed) polypeptide A	0.022
Rrp9	RRP9, small subunit (SSU) processome component, homolog (yeast)	0.022
Metap2	methionine aminopeptidase 2	0.021
Myc	myelocytomatosis oncogene	0.021
Crnkl1	Crn, crooked neck-like 1 (Drosophila)	0.021
Imp4	IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	0.021
Dimt1	DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)	0.021
Pes1	pescadillo homolog 1, containing BRCT domain (zebrafish)	0.021	Human
Krr1	KRR1, small subunit (SSU) processome component, homolog (yeast)	0.021
1810008A18Rik	RIKEN cDNA 1810008A18 gene	0.021
Noc2l	nucleolar complex associated 2 homolog (S. cerevisiae)	0.020
Prpf38a	PRP38 pre-mRNA processing factor 38 (yeast) domain containing A	0.020
Cct3	chaperonin containing Tcp1, subunit 3 (gamma)	0.020
Thumpd1	THUMP domain containing 1	0.020
Naa25	N(alpha)-acetyltransferase 25, NatB auxiliary subunit	0.020
Ercc3	excision repair cross-complementing rodent repair deficiency, complementation group 3	0.020
Eif3b	eukaryotic translation initiation factor 3, subunit B	0.020
Nle1	notchless homolog 1 (Drosophila)	0.019
Mina	myc induced nuclear antigen	0.019
Clp1	CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	0.019
Haus6	HAUS augmin-like complex, subunit 6	0.018
Polr1a	polymerase (RNA) I polypeptide A	0.018
Dbr1	debranching enzyme homolog 1 (S. cerevisiae)	0.018
Xab2	XPA binding protein 2	0.018
Rrp7a	ribosomal RNA processing 7 homolog A (S. cerevisiae)	0.018
Lyar	Ly1 antibody reactive clone	0.018
Sart1	squamous cell carcinoma antigen recognized by T-cells 1	0.018
Hspa4	heat shock protein 4	0.018
Mtf2	metal response element binding transcription factor 2	0.018
Larp1	La ribonucleoprotein domain family, member 1	0.017
Terf1	telomeric repeat binding factor 1	0.017
Ftsjd1	FtsJ methyltransferase domain containing 1	0.017
Mrps18b	mitochondrial ribosomal protein S18B	0.016
Ctu1	cytosolic thiouridylase subunit 1 homolog (S. pombe)	0.016
Umps	uridine monophosphate synthetase	0.016
1300001I01Rik	RIKEN cDNA 1300001I01 gene	0.016
Pa2g4	proliferation-associated 2G4	0.016
Nol8	nucleolar protein 8	0.016
Pwp1	PWP1 homolog (S. cerevisiae)	0.016
Ddx41	DEAD (Asp-Glu-Ala-Asp) box polypeptide 41	0.016
Rbm34	RNA binding motif protein 34	0.015
Sltm	SAFB-like, transcription modulator	0.015
Psmd2	proteasome (prosome, macropain) 26S subunit, non-ATPase, 2	0.015
Polr1b	polymerase (RNA) I polypeptide B	0.015
Yrdc	yrdC domain containing (E.coli)	0.015
Ino80e	INO80 complex subunit E	0.015
Kars	lysyl-tRNA synthetase	0.015
Taf1d	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D	0.015
Ints5	integrator complex subunit 5	0.015
Riok2	RIO kinase 2 (yeast)	0.015
Ifrd2	interferon-related developmental regulator 2	0.015
Ddx54	DEAD (Asp-Glu-Ala-Asp) box polypeptide 54	0.015	Yeast
Rpf1	ribosome production factor 1 homolog (S. cerevisiae)	0.015	Yeast
Baz1a	bromodomain adjacent to zinc finger domain 1A	0.014
Ppat	phosphoribosyl pyrophosphate amidotransferase	0.014
Ddx27	DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	0.014
Taf5l	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	0.014
Ddx39	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	0.014
Rrp8	ribosomal RNA processing 8, methyltransferase, homolog (yeast)	0.014
Utp3	UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	0.014
Mcm6	minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	0.014
Cd2bp2	CD2 antigen (cytoplasmic tail) binding protein 2	0.014
Nhp2	NHP2 ribonucleoprotein homolog (yeast)	0.014
Cpsf1	cleavage and polyadenylation specific factor 1	0.014
Vars	valyl-tRNA synthetase	0.014
Snhg5	small nucleolar RNA host gene 5	0.014
Bop1	block of proliferation 1	0.014
Dnajc11	DnaJ (Hsp40) homolog, subfamily C, member 11	0.014
Ptprc	protein tyrosine phosphatase, receptor type, C	0.014
Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	0.013
Znhit6	zinc finger, HIT type 6	0.013
Psmc4	proteasome (prosome, macropain) 26S subunit, ATPase, 4	0.013
Ngdn	neuroguidin, EIF4E binding protein	0.013
Rbmxrt	RNA binding motif protein, X chromosome retrogene	0.013
Snrpa1	small nuclear ribonucleoprotein polypeptide A'	0.013
Ahctf1	AT hook containing transcription factor 1	0.013
Gpn3	GPN-loop GTPase 3	0.013
Mtap1s	microtubule-associated protein 1S	0.013
Nsun5	NOL1/NOP2/Sun domain family, member 5	0.013
Hnrnpf	heterogeneous nuclear ribonucleoprotein F	0.013
Nom1	nucleolar protein with MIF4G domain 1	0.013
Thoc3	THO complex 3	0.013
Tbl3	transducin (beta)-like 3	0.013	Yeast
Zfp472	zinc finger protein 472	0.013
Mdn1	midasin homolog (yeast)	0.013
Aebp2	AE binding protein 2	0.012
Slc4a1ap	solute carrier family 4 (anion exchanger), member 1, adaptor protein	0.012
Ppp2r2a	protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	0.012
Daxx	Fas death domain-associated protein	0.012
Gtf2f2	general transcription factor IIF, polypeptide 2	0.012
Kpnb1	karyopherin (importin) beta 1	0.012
Tcof1	Treacher Collins Franceschetti syndrome 1, homolog	0.012
Rg9mtd2	RNA (guanine-9-) methyltransferase domain containing 2	0.012
Ppie	peptidylprolyl isomerase E (cyclophilin E)	0.012
Srsf10	serine/arginine-rich splicing factor 10	0.011
2410016O06Rik	RIKEN cDNA 2410016O06 gene	0.011
Vrk1	vaccinia related kinase 1	0.011
Cwc22	CWC22 spliceosome-associated protein homolog (S. cerevisiae)	0.011
D10Wsu52e	DNA segment, Chr 10, Wayne State University 52, expressed	0.011
Smn1	survival motor neuron 1	0.011
Ints2	integrator complex subunit 2	0.011
Twistnb	TWIST neighbor	0.011
Prmt6	protein arginine N-methyltransferase 6	0.011
Snrpd3	small nuclear ribonucleoprotein D3	0.011
Rexo4	REX4, RNA exonuclease 4 homolog (S. cerevisiae)	0.011
Ppid	peptidylprolyl isomerase D (cyclophilin D)	0.011
Polr2b	polymerase (RNA) II (DNA directed) polypeptide B	0.011
Gpn1	GPN-loop GTPase 1	0.010
Cpsf3l	cleavage and polyadenylation specific factor 3-like	0.010
Taf1c	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C	0.010
Rbm17	RNA binding motif protein 17	0.010
Arf6	ADP-ribosylation factor 6	0.010
Hars	histidyl-tRNA synthetase	0.010
Slc25a32	solute carrier family 25, member 32	0.010
Ipo5	importin 5	0.010
Rnmt	RNA (guanine-7-) methyltransferase	0.010