IMP: Integrative Multi-species Prediction

Mus musculus

13 genes annotated in mouse

Multi-species View

transcription from rna polymerase i promoter

GO:0006360

The synthesis of RNA from a DNA template by RNA polymerase I (RNAP I), originating at an RNAP I promoter.

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Known genes in the process in mouseInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "transcription from rna polymerase i promoter"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "transcription from rna polymerase i promoter" (in gray)

Name	Description	Probability	Func Analog Organism
Ubtf	upstream binding transcription factor, RNA polymerase I	0.618
Smarcc1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	0.362
Cav1	caveolin 1, caveolae protein	0.308
Polr1b	polymerase (RNA) I polypeptide B	0.212
Rrp1b	ribosomal RNA processing 1 homolog B (S. cerevisiae)	0.198
Tsr1	TSR1, 20S rRNA accumulation, homolog (yeast)	0.155
Rnf2	ring finger protein 2	0.137
Pwp1	PWP1 homolog (S. cerevisiae)	0.133
Rictor	RPTOR independent companion of MTOR, complex 2	0.126
Dkc1	dyskeratosis congenita 1, dyskerin homolog (human)	0.117
Nufip1	nuclear fragile X mental retardation protein interacting protein 1	0.107
Erbb3	v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	0.106
Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	0.103
Ncl	nucleolin	0.101	Human
Gtpbp4	GTP binding protein 4	0.098
Rptor	regulatory associated protein of MTOR, complex 1	0.097
Rasl11a	RAS-like, family 11, member A	0.090
Kdm1a	lysine (K)-specific demethylase 1A	0.090
Cdk9	cyclin-dependent kinase 9 (CDC2-related kinase)	0.088
Wdr5	WD repeat domain 5	0.086
Fbl	fibrillarin	0.082
Tcerg1	transcription elongation regulator 1 (CA150)	0.077
Mapkap1	mitogen-activated protein kinase associated protein 1	0.073
Zc3h18	zinc finger CCCH-type containing 18	0.073
Ddx21	DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	0.069
Gnl2	guanine nucleotide binding protein-like 2 (nucleolar)	0.069
Smndc1	survival motor neuron domain containing 1	0.066
Nrg1	neuregulin 1	0.061
Dusp1	dual specificity phosphatase 1	0.059
Nanog	Nanog homeobox	0.058
Sdad1	SDA1 domain containing 1	0.057
Suds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	0.053
Rnf220	ring finger protein 220	0.049
C1d	C1D nuclear receptor co-repressor	0.049
Setdb1	SET domain, bifurcated 1	0.049
Ier2	immediate early response 2	0.047
Noc3l	nucleolar complex associated 3 homolog (S. cerevisiae)	0.043
Mlst8	MTOR associated protein, LST8 homolog (S. cerevisiae)	0.039
Sf3b3	splicing factor 3b, subunit 3	0.039
Mybbp1a	MYB binding protein (P160) 1a	0.038
Sfpq	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)	0.038
Kdm2b	lysine (K)-specific demethylase 2B	0.037
Nop58	NOP58 ribonucleoprotein homolog (yeast)	0.034
Eef1e1	eukaryotic translation elongation factor 1 epsilon 1	0.033
Tomm70a	translocase of outer mitochondrial membrane 70 homolog A (yeast)	0.033
Polr1a	polymerase (RNA) I polypeptide A	0.032
Kdm5b	lysine (K)-specific demethylase 5B	0.030
Chd4	chromodomain helicase DNA binding protein 4	0.029
Usp7	ubiquitin specific peptidase 7	0.027
Prpf40a	PRP40 pre-mRNA processing factor 40 homolog A (yeast)	0.026
Ltv1	LTV1 homolog (S. cerevisiae)	0.025
Bcor	BCL6 interacting corepressor	0.025
D19Bwg1357e	DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	0.025
Aqr	aquarius	0.024
Brd2	bromodomain containing 2	0.022
Smc1a	structural maintenance of chromosomes 1A	0.022
Acin1	apoptotic chromatin condensation inducer 1	0.022
Gpatch4	G patch domain containing 4	0.022
D10Wsu102e	DNA segment, Chr 10, Wayne State University 102, expressed	0.021
Lama2	laminin, alpha 2	0.021
N4bp1	NEDD4 binding protein 1	0.021
Timp3	tissue inhibitor of metalloproteinase 3	0.021
Psme3	proteaseome (prosome, macropain) 28 subunit, 3	0.021
Nfya	nuclear transcription factor-Y alpha	0.020
Ifrd1	interferon-related developmental regulator 1	0.020
Mta2	metastasis-associated gene family, member 2	0.020
Nop2	NOP2 nucleolar protein homolog (yeast)	0.019
Disp1	dispatched homolog 1 (Drosophila)	0.019
Strap	serine/threonine kinase receptor associated protein	0.019
Baz1b	bromodomain adjacent to zinc finger domain, 1B	0.019
Hoxb2	homeobox B2	0.018
Psmb4	proteasome (prosome, macropain) subunit, beta type 4	0.018
Glrx3	glutaredoxin 3	0.018
Smn1	survival motor neuron 1	0.018
Baz2a	bromodomain adjacent to zinc finger domain, 2A	0.018
Egr2	early growth response 2	0.018
Gata3	GATA binding protein 3	0.018
Cirh1a	cirrhosis, autosomal recessive 1A (human)	0.017	Yeast
Lmo4	LIM domain only 4	0.017
Cdc73	cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.017
Brd4	bromodomain containing 4	0.017
Ewsr1	Ewing sarcoma breakpoint region 1	0.017
Syncrip	synaptotagmin binding, cytoplasmic RNA interacting protein	0.016
Spata5	spermatogenesis associated 5	0.016
Ctgf	connective tissue growth factor	0.016
Yaf2	YY1 associated factor 2	0.016
Esf1	ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)	0.016
Vprbp	Vpr (HIV-1) binding protein	0.016
Pa2g4	proliferation-associated 2G4	0.016
Usp10	ubiquitin specific peptidase 10	0.016
Ehd2	EH-domain containing 2	0.016
Rest	RE1-silencing transcription factor	0.016
Mga	MAX gene associated	0.016
Eif5b	eukaryotic translation initiation factor 5B	0.016
Lsg1	large subunit GTPase 1 homolog (S. cerevisiae)	0.015
Ctps	cytidine 5'-triphosphate synthase	0.015
Zfp131	zinc finger protein 131	0.015
Eif2c2	eukaryotic translation initiation factor 2C, 2	0.015
Ppat	phosphoribosyl pyrophosphate amidotransferase	0.015
Klf4	Kruppel-like factor 4 (gut)	0.015
Lpar4	lysophosphatidic acid receptor 4	0.015
Ube2e1	ubiquitin-conjugating enzyme E2E 1, UBC4/5 homolog (yeast)	0.015
Ppp2ca	protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	0.015
Eprs	glutamyl-prolyl-tRNA synthetase	0.014
Btg2	B-cell translocation gene 2, anti-proliferative	0.014
Ftsj3	FtsJ homolog 3 (E. coli)	0.014
Whsc2	Wolf-Hirschhorn syndrome candidate 2 (human)	0.014
Ppp2r2a	protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	0.014
Kpna1	karyopherin (importin) alpha 1	0.014
Sertad1	SERTA domain containing 1	0.014
Scaf4	SR-related CTD-associated factor 4	0.014
Prmt5	protein arginine N-methyltransferase 5	0.014
Taf4b	TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor	0.014
Ythdf1	YTH domain family 1	0.013
Cav3	caveolin 3	0.013
Cxcr7	chemokine (C-X-C motif) receptor 7	0.013
Etf1	eukaryotic translation termination factor 1	0.013
Krt7	keratin 7	0.013
Nop14	NOP14 nucleolar protein homolog (yeast)	0.013
Rsl24d1	ribosomal L24 domain containing 1	0.013
Paf1	Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)	0.013
Bcam	basal cell adhesion molecule	0.013
Gar1	GAR1 ribonucleoprotein homolog (yeast)	0.013
Pprc1	peroxisome proliferative activated receptor, gamma, coactivator-related 1	0.013
Abce1	ATP-binding cassette, sub-family E (OABP), member 1	0.013
Srsf4	serine/arginine-rich splicing factor 4	0.012
Hdac1	histone deacetylase 1	0.012
Sin3b	transcriptional regulator, SIN3B (yeast)	0.012	Yeast
Ppan	peter pan homolog (Drosophila)	0.012
Wbp11	WW domain binding protein 11	0.012
Fos	FBJ osteosarcoma oncogene	0.012
Ppig	peptidyl-prolyl isomerase G (cyclophilin G)	0.012
Daxx	Fas death domain-associated protein	0.012
Srrm1	serine/arginine repetitive matrix 1	0.012
Sdf2	stromal cell derived factor 2	0.012
Riok2	RIO kinase 2 (yeast)	0.012
Hhat	hedgehog acyltransferase	0.012
Errfi1	ERBB receptor feedback inhibitor 1	0.012
Jmjd6	jumonji domain containing 6	0.012
Nup54	nucleoporin 54	0.012
Eif2b3	eukaryotic translation initiation factor 2B, subunit 3	0.011
Telo2	TEL2, telomere maintenance 2, homolog (S. cerevisiae)	0.011
Mylk	myosin, light polypeptide kinase	0.011
Rpl7l1	ribosomal protein L7-like 1	0.011
Aatf	apoptosis antagonizing transcription factor	0.011
Rybp	RING1 and YY1 binding protein	0.011
Dcp1a	DCP1 decapping enzyme homolog A (S. cerevisiae)	0.011
Zfp553	zinc finger protein 553	0.011
Grwd1	glutamate-rich WD repeat containing 1	0.011
Ndufaf4	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	0.011
Sart3	squamous cell carcinoma antigen recognized by T-cells 3	0.011
Sp1	trans-acting transcription factor 1	0.011
Dhx9	DEAH (Asp-Glu-Ala-His) box polypeptide 9	0.011
Pgam5	phosphoglycerate mutase family member 5	0.011
Zfp259	zinc finger protein 259	0.011
Taf5l	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	0.011
Eif3f	eukaryotic translation initiation factor 3, subunit F	0.011
Efemp1	epidermal growth factor-containing fibulin-like extracellular matrix protein 1	0.011
Fam60a	family with sequence similarity 60, member A	0.011
Nop56	NOP56 ribonucleoprotein homolog (yeast)	0.011
Dcaf7	DDB1 and CUL4 associated factor 7	0.011
Hand1	heart and neural crest derivatives expressed transcript 1	0.011
Rrp12	ribosomal RNA processing 12 homolog (S. cerevisiae)	0.011
Gdnf	glial cell line derived neurotrophic factor	0.010
Rpp14	ribonuclease P 14 subunit (human)	0.010
Lama4	laminin, alpha 4	0.010
Prmt3	protein arginine N-methyltransferase 3	0.010
Xpo6	exportin 6	0.010
Atf7ip	activating transcription factor 7 interacting protein	0.010
Pmp22	peripheral myelin protein 22	0.010
Ntf3	neurotrophin 3	0.010
Gpx8	glutathione peroxidase 8 (putative)	0.010
Ep400	E1A binding protein p400	0.010
Zcchc10	zinc finger, CCHC domain containing 10	0.010
Heyl	hairy/enhancer-of-split related with YRPW motif-like	0.010
Mmp11	matrix metallopeptidase 11	0.010
Dnajc21	DnaJ (Hsp40) homolog, subfamily C, member 21	0.010