IMP: Integrative Multi-species Prediction

Mus musculus

10 genes annotated in mouse

rrna processing

Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.

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Known genes in the process in mouseInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "rrna processing"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "rrna processing" (in gray)

Name	Description	Probability	Func Analog Organism
Wdr74	WD repeat domain 74	0.664
Ddx21	DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	0.565
Wdr43	WD repeat domain 43	0.455	Yeast
Cirh1a	cirrhosis, autosomal recessive 1A (human)	0.418	Human Yeast
Ltv1	LTV1 homolog (S. cerevisiae)	0.318
Eed	embryonic ectoderm development	0.276
Tsr1	TSR1, 20S rRNA accumulation, homolog (yeast)	0.240
Nsun2	NOL1/NOP2/Sun domain family member 2	0.182
Rsl1d1	ribosomal L1 domain containing 1	0.175
Mybbp1a	MYB binding protein (P160) 1a	0.161
Cebpz	CCAAT/enhancer binding protein zeta	0.154
Rrp15	ribosomal RNA processing 15 homolog (S. cerevisiae)	0.140
Rrs1	RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	0.138
D19Bwg1357e	DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	0.135
Fbl	fibrillarin	0.125
Mki67ip	Mki67 (FHA domain) interacting nucleolar phosphoprotein	0.123
Ddx10	DEAD (Asp-Glu-Ala-Asp) box polypeptide 10	0.118	Yeast
Nop56	NOP56 ribonucleoprotein homolog (yeast)	0.116	Yeast
Gtpbp4	GTP binding protein 4	0.112
Ftsj3	FtsJ homolog 3 (E. coli)	0.108
Gnl3	guanine nucleotide binding protein-like 3 (nucleolar)	0.088
Nop2	NOP2 nucleolar protein homolog (yeast)	0.086
2610027L16Rik	RIKEN cDNA 2610027L16 gene	0.085
Nolc1	nucleolar and coiled-body phosphoprotein 1	0.078
Utp20	UTP20, small subunit (SSU) processome component, homolog (yeast)	0.074
Wdr3	WD repeat domain 3	0.068	Yeast
Lsg1	large subunit GTPase 1 homolog (S. cerevisiae)	0.065
Ppan	peter pan homolog (Drosophila)	0.064	Yeast
Mrps18b	mitochondrial ribosomal protein S18B	0.063
Grwd1	glutamate-rich WD repeat containing 1	0.062
Eif3b	eukaryotic translation initiation factor 3, subunit B	0.060
Nmd3	NMD3 homolog (S. cerevisiae)	0.057
Spata5	spermatogenesis associated 5	0.057
Rrp12	ribosomal RNA processing 12 homolog (S. cerevisiae)	0.054
Dus1l	dihydrouridine synthase 1-like (S. cerevisiae)	0.049
Kti12	KTI12 homolog, chromatin associated (S. cerevisiae)	0.049
Rars	arginyl-tRNA synthetase	0.047
Eif3d	eukaryotic translation initiation factor 3, subunit D	0.046
Dkc1	dyskeratosis congenita 1, dyskerin homolog (human)	0.046
Nop14	NOP14 nucleolar protein homolog (yeast)	0.042
Mak16	MAK16 homolog (S. cerevisiae)	0.041
Wdr46	WD repeat domain 46	0.041	Yeast
Gnl2	guanine nucleotide binding protein-like 2 (nucleolar)	0.040
D10Wsu102e	DNA segment, Chr 10, Wayne State University 102, expressed	0.039
Srm	spermidine synthase	0.035
Rpl21	ribosomal protein L21	0.031
Ccdc86	coiled-coil domain containing 86	0.030
Ddx18	DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	0.030	Yeast
Rps7	ribosomal protein S7	0.030
Rcl1	RNA terminal phosphate cyclase-like 1	0.029
Pwp2	PWP2 periodic tryptophan protein homolog (yeast)	0.028	Yeast
Pus1	pseudouridine synthase 1	0.026
Wdr77	WD repeat domain 77	0.025
Dnttip2	deoxynucleotidyltransferase, terminal, interacting protein 2	0.025
Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	0.025
Plrg1	pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	0.024
Tbrg4	transforming growth factor beta regulated gene 4	0.024
Abt1	activator of basal transcription 1	0.023
Nhp2	NHP2 ribonucleoprotein homolog (yeast)	0.022
Wdr36	WD repeat domain 36	0.021	Yeast Zebrafish
Smn1	survival motor neuron 1	0.021
Nop16	NOP16 nucleolar protein homolog (yeast)	0.021
Nufip1	nuclear fragile X mental retardation protein interacting protein 1	0.020
Usp39	ubiquitin specific peptidase 39	0.019
Elac2	elaC homolog 2 (E. coli)	0.019
Adsl	adenylosuccinate lyase	0.019
Wdr55	WD repeat domain 55	0.019
Xpo5	exportin 5	0.018
Ddx41	DEAD (Asp-Glu-Ala-Asp) box polypeptide 41	0.018
Thoc3	THO complex 3	0.018
Smu1	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	0.018
Noc3l	nucleolar complex associated 3 homolog (S. cerevisiae)	0.018
Sdad1	SDA1 domain containing 1	0.017
Ddx20	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	0.017
Ttc27	tetratricopeptide repeat domain 27	0.016
Wdr5	WD repeat domain 5	0.016
Nubp1	nucleotide binding protein 1	0.016
Eprs	glutamyl-prolyl-tRNA synthetase	0.016
Emg1	EMG1 nucleolar protein homolog (S. cerevisiae)	0.016
Pprc1	peroxisome proliferative activated receptor, gamma, coactivator-related 1	0.016
Gart	phosphoribosylglycinamide formyltransferase	0.015
Lyar	Ly1 antibody reactive clone	0.015
Rps3a	ribosomal protein S3A	0.015
Rrp8	ribosomal RNA processing 8, methyltransferase, homolog (yeast)	0.015
Rrp1b	ribosomal RNA processing 1 homolog B (S. cerevisiae)	0.015
Mphosph10	M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	0.015
Tomm70a	translocase of outer mitochondrial membrane 70 homolog A (yeast)	0.015
Tars	threonyl-tRNA synthetase	0.015
Noc4l	nucleolar complex associated 4 homolog (S. cerevisiae)	0.014
Polr1e	polymerase (RNA) I polypeptide E	0.014
Eif1a	eukaryotic translation initiation factor 1A	0.014
Cyld	cylindromatosis (turban tumor syndrome)	0.014
Nubp2	nucleotide binding protein 2	0.014
Dhx9	DEAH (Asp-Glu-Ala-His) box polypeptide 9	0.013
Orc2	origin recognition complex, subunit 2	0.013
Utp15	UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast)	0.013	Yeast
Prpf40a	PRP40 pre-mRNA processing factor 40 homolog A (yeast)	0.013
Ngdn	neuroguidin, EIF4E binding protein	0.013
Nip7	nuclear import 7 homolog (S. cerevisiae)	0.013
Pdcd11	programmed cell death 11	0.013	Yeast
Rad17	RAD17 homolog (S. pombe)	0.013
Surf6	surfeit gene 6	0.013
Aatf	apoptosis antagonizing transcription factor	0.013
Smyd5	SET and MYND domain containing 5	0.013
Yrdc	yrdC domain containing (E.coli)	0.012
Thumpd1	THUMP domain containing 1	0.012
Toe1	target of EGR1, member 1 (nuclear)	0.012
Rpl13a	ribosomal protein L13A	0.012
Imp4	IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	0.012	Yeast
Bop1	block of proliferation 1	0.012
Znhit6	zinc finger, HIT type 6	0.012
Nup153	nucleoporin 153	0.012
Llph	LLP homolog, long-term synaptic facilitation (Aplysia)	0.011
Ppm1g	protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform	0.011
Phf5a	PHD finger protein 5A	0.011
Naa25	N(alpha)-acetyltransferase 25, NatB auxiliary subunit	0.011
Rbm8a	RNA binding motif protein 8a	0.011
Eif2s1	eukaryotic translation initiation factor 2, subunit 1 alpha	0.011
Ddx3x	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	0.011
Twistnb	TWIST neighbor	0.010
Sf3b3	splicing factor 3b, subunit 3	0.010
Npm1	nucleophosmin 1	0.010
Krr1	KRR1, small subunit (SSU) processome component, homolog (yeast)	0.010
Dbr1	debranching enzyme homolog 1 (S. cerevisiae)	0.010
Rpl11	ribosomal protein L11	0.010
Isg20l2	interferon stimulated exonuclease gene 20-like 2	0.010
Srsf7	serine/arginine-rich splicing factor 7	0.010
LOC100044627	60S ribosomal protein L23-like	0.010