IMP: Integrative Multi-species Prediction

Mus musculus

1 genes annotated in mouse

maturation of ssu rrna

Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule.

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Known genes in the process in mouseInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "maturation of ssu rrna"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "maturation of ssu rrna" (in gray)

Name	Description	Probability	Func Analog Organism
Tsr1	TSR1, 20S rRNA accumulation, homolog (yeast)	0.974
Ddx21	DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	0.968
Gnl3	guanine nucleotide binding protein-like 3 (nucleolar)	0.954
Cirh1a	cirrhosis, autosomal recessive 1A (human)	0.883	Human Yeast
Mki67ip	Mki67 (FHA domain) interacting nucleolar phosphoprotein	0.872
Wdr43	WD repeat domain 43	0.849	Yeast
Eed	embryonic ectoderm development	0.684
Mybbp1a	MYB binding protein (P160) 1a	0.666
Rrs1	RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	0.623
Gtpbp4	GTP binding protein 4	0.590
Nop56	NOP56 ribonucleoprotein homolog (yeast)	0.589
Rrp15	ribosomal RNA processing 15 homolog (S. cerevisiae)	0.561
Wdr74	WD repeat domain 74	0.560
Grwd1	glutamate-rich WD repeat containing 1	0.548
D19Bwg1357e	DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	0.497
Pprc1	peroxisome proliferative activated receptor, gamma, coactivator-related 1	0.481
Ppan	peter pan homolog (Drosophila)	0.462
Cebpz	CCAAT/enhancer binding protein zeta	0.399
Fbl	fibrillarin	0.398
Mak16	MAK16 homolog (S. cerevisiae)	0.390
Nop2	NOP2 nucleolar protein homolog (yeast)	0.347
Eif1a	eukaryotic translation initiation factor 1A	0.346
Rrp12	ribosomal RNA processing 12 homolog (S. cerevisiae)	0.305
Etf1	eukaryotic translation termination factor 1	0.264
Nufip1	nuclear fragile X mental retardation protein interacting protein 1	0.257
Utp20	UTP20, small subunit (SSU) processome component, homolog (yeast)	0.256
Igh	immunoglobulin heavy chain complex	0.233
Ltv1	LTV1 homolog (S. cerevisiae)	0.227
Gar1	GAR1 ribonucleoprotein homolog (yeast)	0.205
Rpl36a	ribosomal protein L36A	0.186
Srm	spermidine synthase	0.175
Fam203a	family with sequence similarity 203, member A	0.173
Nsun2	NOL1/NOP2/Sun domain family member 2	0.171
Dnttip2	deoxynucleotidyltransferase, terminal, interacting protein 2	0.156
Rpl11	ribosomal protein L11	0.141
Nhp2	NHP2 ribonucleoprotein homolog (yeast)	0.128
Eif3g	eukaryotic translation initiation factor 3, subunit G	0.124
Naa15	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	0.114
Kti12	KTI12 homolog, chromatin associated (S. cerevisiae)	0.114
Ccdc86	coiled-coil domain containing 86	0.111
Wdr3	WD repeat domain 3	0.110	Yeast
Dis3	DIS3 mitotic control homolog (S. cerevisiae)	0.103
Rsl24d1	ribosomal L24 domain containing 1	0.100
Rplp2	ribosomal protein, large P2	0.098
Eif3a	eukaryotic translation initiation factor 3, subunit A	0.097
Pwp2	PWP2 periodic tryptophan protein homolog (yeast)	0.087	Yeast
Nip7	nuclear import 7 homolog (S. cerevisiae)	0.085
Brix1	BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)	0.084
Tex10	testis expressed gene 10	0.082
Rpl7l1	ribosomal protein L7-like 1	0.081
Ddx18	DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	0.080	Yeast
Znhit6	zinc finger, HIT type 6	0.077
Rps19	ribosomal protein S19	0.075	Human
Spata5	spermatogenesis associated 5	0.069
Rpl18	ribosomal protein L18	0.067
Nolc1	nucleolar and coiled-body phosphoprotein 1	0.066
Rpl8	ribosomal protein L8	0.063
Wdr55	WD repeat domain 55	0.061
Rpl37a	ribosomal protein L37a	0.060
Eif3d	eukaryotic translation initiation factor 3, subunit D	0.059
Nop16	NOP16 nucleolar protein homolog (yeast)	0.059
Rps10	ribosomal protein S10	0.058
LOC100503055	60S ribosomal protein L29-like	0.056
Impdh2	inosine 5'-phosphate dehydrogenase 2	0.056
Mrps18b	mitochondrial ribosomal protein S18B	0.053
Ncl	nucleolin	0.051
Tars	threonyl-tRNA synthetase	0.051
Xpot	exportin, tRNA (nuclear export receptor for tRNAs)	0.051
Mphosph10	M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	0.049
Wdr36	WD repeat domain 36	0.049
2610027L16Rik	RIKEN cDNA 2610027L16 gene	0.049
Rrp8	ribosomal RNA processing 8, methyltransferase, homolog (yeast)	0.049
Magoh	mago-nashi homolog, proliferation-associated (Drosophila)	0.046
Rrp1b	ribosomal RNA processing 1 homolog B (S. cerevisiae)	0.046
Noc4l	nucleolar complex associated 4 homolog (S. cerevisiae)	0.046
Lyar	Ly1 antibody reactive clone	0.044
Rps15	ribosomal protein S15	0.044
Wdr77	WD repeat domain 77	0.043
Dbr1	debranching enzyme homolog 1 (S. cerevisiae)	0.043
Pus7l	pseudouridylate synthase 7 homolog (S. cerevisiae)-like	0.042
Ddx20	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	0.042
Esf1	ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)	0.042
Rcl1	RNA terminal phosphate cyclase-like 1	0.041
Rpl13a	ribosomal protein L13A	0.041
Ddx51	DEAD (Asp-Glu-Ala-Asp) box polypeptide 51	0.041
Myc	myelocytomatosis oncogene	0.041
Rpl14	ribosomal protein L14	0.040
Npm1	nucleophosmin 1	0.039
Zzz3	zinc finger, ZZ domain containing 3	0.039
Bysl	bystin-like	0.039
Rpl26	ribosomal protein L26	0.039
Nmd3	NMD3 homolog (S. cerevisiae)	0.039
Nol11	nucleolar protein 11	0.039
Noc3l	nucleolar complex associated 3 homolog (S. cerevisiae)	0.039
Rpl19	ribosomal protein L19	0.038
LOC100044627	60S ribosomal protein L23-like	0.038
Cct5	chaperonin containing Tcp1, subunit 5 (epsilon)	0.036
Rpsa	ribosomal protein SA	0.035
Aimp2	aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	0.035
Rplp1	ribosomal protein, large, P1	0.035
Ddx10	DEAD (Asp-Glu-Ala-Asp) box polypeptide 10	0.034
Apex1	apurinic/apyrimidinic endonuclease 1	0.034
Sdad1	SDA1 domain containing 1	0.034
Mettl1	methyltransferase like 1	0.034
Rps25	ribosomal protein S25	0.034
Rnf138	ring finger protein 138	0.033
Rbm19	RNA binding motif protein 19	0.033	Yeast
Eprs	glutamyl-prolyl-tRNA synthetase	0.032
Abt1	activator of basal transcription 1	0.032
Rbm8a	RNA binding motif protein 8a	0.032
Rps13	ribosomal protein S13	0.032
Fau	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	0.031
Dkc1	dyskeratosis congenita 1, dyskerin homolog (human)	0.031
Rpl36	ribosomal protein L36	0.031
Ngdn	neuroguidin, EIF4E binding protein	0.030
Rpl21	ribosomal protein L21	0.030
Rpl22	ribosomal protein L22	0.029
Utp18	UTP18, small subunit (SSU) processome component, homolog (yeast)	0.029	Yeast
Gnl2	guanine nucleotide binding protein-like 2 (nucleolar)	0.028
Pdcd11	programmed cell death 11	0.028	Yeast
Eif2s1	eukaryotic translation initiation factor 2, subunit 1 alpha	0.027
Rpl38	ribosomal protein L38	0.027
Rpl3	ribosomal protein L3	0.027
Rps7	ribosomal protein S7	0.027
Gtf2h1	general transcription factor II H, polypeptide 1	0.027
Adrm1	adhesion regulating molecule 1	0.026
Zcchc10	zinc finger, CCHC domain containing 10	0.026
Ddx54	DEAD (Asp-Glu-Ala-Asp) box polypeptide 54	0.026
Surf6	surfeit gene 6	0.026
Rars	arginyl-tRNA synthetase	0.026
Aatf	apoptosis antagonizing transcription factor	0.025
Bms1	BMS1 homolog, ribosome assembly protein (yeast)	0.025
Twistnb	TWIST neighbor	0.025
Cct2	chaperonin containing Tcp1, subunit 2 (beta)	0.025
Pes1	pescadillo homolog 1, containing BRCT domain (zebrafish)	0.025
Krr1	KRR1, small subunit (SSU) processome component, homolog (yeast)	0.025
Bax	BCL2-associated X protein	0.025
Rbm34	RNA binding motif protein 34	0.024
Nol8	nucleolar protein 8	0.024
Rps3	ribosomal protein S3	0.024
Pno1	partner of NOB1 homolog (S. cerevisiae)	0.024
Taf1d	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D	0.023
Pus1	pseudouridine synthase 1	0.023
Rps5	ribosomal protein S5	0.023
Gm9846	predicted gene 9846	0.022
Dph5	DPH5 homolog (S. cerevisiae)	0.022
Cct3	chaperonin containing Tcp1, subunit 3 (gamma)	0.022
Ncbp1	nuclear cap binding protein subunit 1	0.022
Pa2g4	proliferation-associated 2G4	0.022
Pwp1	PWP1 homolog (S. cerevisiae)	0.022
Sssca1	Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)	0.022
Gart	phosphoribosylglycinamide formyltransferase	0.021
Abce1	ATP-binding cassette, sub-family E (OABP), member 1	0.021
Mrto4	MRT4, mRNA turnover 4, homolog (S. cerevisiae)	0.021
Llph	LLP homolog, long-term synaptic facilitation (Aplysia)	0.021
Gpatch4	G patch domain containing 4	0.021
Utp14a	UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	0.020
Dohh	deoxyhypusine hydroxylase/monooxygenase	0.020
Ppie	peptidylprolyl isomerase E (cyclophilin E)	0.020
Gltscr2	glioma tumor suppressor candidate region gene 2	0.020
Ythdf2	YTH domain family 2	0.019
D10Wsu52e	DNA segment, Chr 10, Wayne State University 52, expressed	0.019
Dnajc2	DnaJ (Hsp40) homolog, subfamily C, member 2	0.019
Rps15a	ribosomal protein S15A	0.019
Polr1e	polymerase (RNA) I polypeptide E	0.019
Zfp330	zinc finger protein 330	0.019
Rps9	ribosomal protein S9	0.018	Yeast
Dph2	DPH2 homolog (S. cerevisiae)	0.018
Ctps	cytidine 5'-triphosphate synthase	0.018
Rps3a	ribosomal protein S3A	0.018
Rpl23	ribosomal protein L23	0.018
Rpl6	ribosomal protein L6	0.018
Rrp9	RRP9, small subunit (SSU) processome component, homolog (yeast)	0.018
Ttc27	tetratricopeptide repeat domain 27	0.018
Rbmxrt	RNA binding motif protein, X chromosome retrogene	0.017
Prmt1	protein arginine N-methyltransferase 1	0.017
Rps24	ribosomal protein S24	0.017
Utp3	UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	0.017
Ints5	integrator complex subunit 5	0.017
Rpl27a	ribosomal protein L27A	0.017
Rps11	ribosomal protein S11	0.017
Heatr1	HEAT repeat containing 1	0.016
Rpl18a	ribosomal protein L18A	0.016
LOC100502825	60S ribosomal protein L37-like	0.016
Hnrpdl	heterogeneous nuclear ribonucleoprotein D-like	0.016
Rplp0	ribosomal protein, large, P0	0.016
D10Wsu102e	DNA segment, Chr 10, Wayne State University 102, expressed	0.016
Zfp259	zinc finger protein 259	0.016
Yrdc	yrdC domain containing (E.coli)	0.015
Rps21	ribosomal protein S21	0.015
Tbrg4	transforming growth factor beta regulated gene 4	0.015
Eif5b	eukaryotic translation initiation factor 5B	0.015
Uba52	ubiquitin A-52 residue ribosomal protein fusion product 1	0.015
Sf3b3	splicing factor 3b, subunit 3	0.015
Nop14	NOP14 nucleolar protein homolog (yeast)	0.014
Psmd12	proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	0.014
LOC100504629	60S ribosomal protein L29-like	0.014
U2af1	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1	0.014
Prmt6	protein arginine N-methyltransferase 6	0.014
Ftsj3	FtsJ homolog 3 (E. coli)	0.013
Polr2h	polymerase (RNA) II (DNA directed) polypeptide H	0.013
Polr2b	polymerase (RNA) II (DNA directed) polypeptide B	0.013
Gm10294	predicted pseudogene 10294	0.013
Smyd5	SET and MYND domain containing 5	0.013
Rpl13	ribosomal protein L13	0.013
Aen	apoptosis enhancing nuclease	0.013
Ovca2	candidate tumor suppressor in ovarian cancer 2	0.013
Rps14	ribosomal protein S14	0.013
Imp3	IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)	0.013
Pde12	phosphodiesterase 12	0.012
Nob1	NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	0.012
Naa25	N(alpha)-acetyltransferase 25, NatB auxiliary subunit	0.012
Rps17	ribosomal protein S17	0.012
Ipo4	importin 4	0.012
Rpl27	ribosomal protein L27	0.012
Elac2	elaC homolog 2 (E. coli)	0.012
Nup153	nucleoporin 153	0.012
Gm10335	predicted gene 10335	0.012
Ptges3	prostaglandin E synthase 3 (cytosolic)	0.012
Btaf1	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)	0.012
Ccar1	cell division cycle and apoptosis regulator 1	0.012
Syncrip	synaptotagmin binding, cytoplasmic RNA interacting protein	0.012
Plrg1	pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	0.012
Rpf2	ribosome production factor 2 homolog (S. cerevisiae)	0.012
Ino80e	INO80 complex subunit E	0.011
Prpf3	PRP3 pre-mRNA processing factor 3 homolog (yeast)	0.011
Rpgrip1l	Rpgrip1-like	0.011
Rps26	ribosomal protein S26	0.011
Iars	isoleucine-tRNA synthetase	0.011
Wdr46	WD repeat domain 46	0.011	Yeast
Eif6	eukaryotic translation initiation factor 6	0.011
Pdcd2	programmed cell death 2	0.011
Tra2b	transformer 2 beta homolog (Drosophila)	0.011
Imp4	IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	0.011
Ctu2	cytosolic thiouridylase subunit 2 homolog (S. pombe)	0.011
Polr1a	polymerase (RNA) I polypeptide A	0.011
Nsun5	NOL1/NOP2/Sun domain family, member 5	0.010
Trp53	transformation related protein 53	0.010
Eif2s2	eukaryotic translation initiation factor 2, subunit 2 (beta)	0.010
Pus7	pseudouridylate synthase 7 homolog (S. cerevisiae)	0.010
Isg20l2	interferon stimulated exonuclease gene 20-like 2	0.010
Pinx1	PIN2/TERF1 interacting, telomerase inhibitor 1	0.010
Dcaf13	DDB1 and CUL4 associated factor 13	0.010	Yeast
Puf60	poly-U binding splicing factor 60	0.010