Process View
The modification of histone H3 by addition of a methyl group to lysine at position 4 of the histone.
In addition to gene-name show these genes:
Click on a gene's description to view its network relationships with genes known to be involved in "histone h3 k4 methylation"
Name | Description | Probability | Func Analog Organism | |
---|---|---|---|---|
Rbbp5 | retinoblastoma binding protein 5 | 0.979 | ||
Wdr5 | WD repeat domain 5 | 0.926 | ||
Rnf2 | ring finger protein 2 | 0.923 | ||
Ash2l | ash2 (absent, small, or homeotic)-like (Drosophila) | 0.882 | Human Worm Fly | |
Gata1 | GATA binding protein 1 | 0.805 | Mouse | |
Kdm2b | lysine (K)-specific demethylase 2B | 0.765 | ||
Dnmt3a | DNA methyltransferase 3A | 0.662 | ||
Trrap | transformation/transcription domain-associated protein | 0.640 | ||
Arid4b | AT rich interactive domain 4B (RBP1-like) | 0.576 | Mouse | |
Zfpm2 | zinc finger protein, multitype 2 | 0.565 | ||
Crebbp | CREB binding protein | 0.485 | ||
Mll2 | myeloid/lymphoid or mixed-lineage leukemia 2 | 0.430 | ||
Mll3 | myeloid/lymphoid or mixed-lineage leukemia 3 | 0.404 | Human Worm Fly | |
Arid4a | AT rich interactive domain 4A (RBP1-like) | 0.295 | ||
Tnrc6b | trinucleotide repeat containing 6b | 0.216 | ||
Brca2 | breast cancer 2 | 0.202 | ||
Runx1 | runt related transcription factor 1 | 0.196 | ||
Zfp445 | zinc finger protein 445 | 0.150 | ||
Tal1 | T-cell acute lymphocytic leukemia 1 | 0.144 | ||
Atm | ataxia telangiectasia mutated homolog (human) | 0.140 | ||
Mll1 | myeloid/lymphoid or mixed-lineage leukemia 1 | 0.133 | ||
Brwd1 | bromodomain and WD repeat domain containing 1 | 0.133 | ||
Arid1a | AT rich interactive domain 1A (SWI-like) | 0.129 | ||
Klf3 | Kruppel-like factor 3 (basic) | 0.119 | ||
Ttc14 | tetratricopeptide repeat domain 14 | 0.112 | ||
Atrx | alpha thalassemia/mental retardation syndrome X-linked homolog (human) | 0.105 | ||
Rictor | RPTOR independent companion of MTOR, complex 2 | 0.102 | ||
Brd4 | bromodomain containing 4 | 0.099 | ||
Ubtf | upstream binding transcription factor, RNA polymerase I | 0.086 | ||
Bptf | bromodomain PHD finger transcription factor | 0.078 | ||
Parp1 | poly (ADP-ribose) polymerase family, member 1 | 0.076 | ||
Nipbl | Nipped-B homolog (Drosophila) | 0.076 | ||
Nkx2-5 | NK2 transcription factor related, locus 5 (Drosophila) | 0.072 | ||
Notch1 | Notch gene homolog 1 (Drosophila) | 0.070 | ||
D4Wsu53e | DNA segment, Chr 4, Wayne State University 53, expressed | 0.069 | ||
Sfswap | splicing factor, suppressor of white-apricot homolog (Drosophila) | 0.069 | ||
Rsf1 | remodeling and spacing factor 1 | 0.067 | ||
Ncoa2 | nuclear receptor coactivator 2 | 0.067 | ||
Zfp592 | zinc finger protein 592 | 0.066 | ||
Dnajc5 | DnaJ (Hsp40) homolog, subfamily C, member 5 | 0.064 | ||
Ctcf | CCCTC-binding factor | 0.064 | ||
Sf1 | splicing factor 1 | 0.062 | ||
Zmynd11 | zinc finger, MYND domain containing 11 | 0.059 | ||
Kdm1a | lysine (K)-specific demethylase 1A | 0.056 | ||
Med13l | mediator complex subunit 13-like | 0.055 | ||
Hells | helicase, lymphoid specific | 0.053 | ||
Gfi1b | growth factor independent 1B | 0.052 | ||
Ilf3 | interleukin enhancer binding factor 3 | 0.052 | ||
Rbm5 | RNA binding motif protein 5 | 0.050 | ||
Pax2 | paired box gene 2 | 0.050 | ||
Foxp1 | forkhead box P1 | 0.050 | ||
Myb | myeloblastosis oncogene | 0.050 | Human | |
Rqcd1 | rcd1 (required for cell differentiation) homolog 1 (S. pombe) | 0.049 | ||
Chd2 | chromodomain helicase DNA binding protein 2 | 0.045 | ||
Ncor1 | nuclear receptor co-repressor 1 | 0.044 | ||
Akt1 | thymoma viral proto-oncogene 1 | 0.044 | ||
Men1 | multiple endocrine neoplasia 1 | 0.042 | ||
4921513D23Rik | RIKEN cDNA 4921513D23 gene | 0.041 | ||
Ddx46 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 | 0.040 | ||
1700081L11Rik | RIKEN cDNA 1700081L11 gene | 0.040 | ||
Ncapd3 | non-SMC condensin II complex, subunit D3 | 0.039 | ||
2810046L04Rik | RIKEN cDNA 2810046L04 gene | 0.038 | ||
Zbtb20 | zinc finger and BTB domain containing 20 | 0.038 | ||
Usp37 | ubiquitin specific peptidase 37 | 0.037 | ||
Tbx20 | T-box 20 | 0.036 | ||
Paxip1 | PAX interacting (with transcription-activation domain) protein 1 | 0.036 | ||
Wbp7 | WW domain binding protein 7 | 0.036 | ||
Macf1 | microtubule-actin crosslinking factor 1 | 0.035 | ||
Prr3 | proline-rich polypeptide 3 | 0.035 | ||
Ptpn14 | protein tyrosine phosphatase, non-receptor type 14 | 0.035 | ||
Cdk9 | cyclin-dependent kinase 9 (CDC2-related kinase) | 0.035 | Yeast | |
Zkscan3 | zinc finger with KRAB and SCAN domains 3 | 0.034 | ||
Phf21a | PHD finger protein 21A | 0.034 | ||
Setd1b | SET domain containing 1B | 0.034 | ||
Tnrc6c | trinucleotide repeat containing 6C | 0.033 | ||
Cbx2 | chromobox homolog 2 (Drosophila Pc class) | 0.031 | ||
Zfp871 | zinc finger protein 871 | 0.031 | ||
Ssbp2 | single-stranded DNA binding protein 2 | 0.031 | ||
Nfat5 | nuclear factor of activated T-cells 5 | 0.030 | ||
Nbn | nibrin | 0.030 | ||
Ezh2 | enhancer of zeste homolog 2 (Drosophila) | 0.030 | ||
Hira | histone cell cycle regulation defective homolog A (S. cerevisiae) | 0.029 | ||
Ankrd16 | ankyrin repeat domain 16 | 0.029 | ||
Bcor | BCL6 interacting corepressor | 0.029 | Human | |
Taf4a | TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor | 0.028 | ||
Hexim1 | hexamethylene bis-acetamide inducible 1 | 0.028 | ||
Leo1 | Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) | 0.028 | ||
Foxf1a | forkhead box F1a | 0.028 | ||
Dicer1 | Dicer1, Dcr-1 homolog (Drosophila) | 0.028 | ||
Ino80d | INO80 complex subunit D | 0.028 | ||
Casc3 | cancer susceptibility candidate 3 | 0.027 | ||
Paf1 | Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) | 0.027 | ||
Ppara | peroxisome proliferator activated receptor alpha | 0.027 | ||
Rela | v-rel reticuloendotheliosis viral oncogene homolog A (avian) | 0.026 | ||
Pold3 | polymerase (DNA-directed), delta 3, accessory subunit | 0.026 | ||
Msh2 | mutS homolog 2 (E. coli) | 0.026 | ||
Smarca4 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 | 0.025 | ||
Baz2b | bromodomain adjacent to zinc finger domain, 2B | 0.024 | ||
Clk1 | CDC-like kinase 1 | 0.024 | ||
Nup85 | nucleoporin 85 | 0.024 | ||
Hdac2 | histone deacetylase 2 | 0.024 | ||
Ncoa6 | nuclear receptor coactivator 6 | 0.023 | ||
Trim28 | tripartite motif-containing 28 | 0.023 | ||
Kat2a | K(lysine) acetyltransferase 2A | 0.022 | ||
Jag1 | jagged 1 | 0.022 | ||
Plac1 | placental specific protein 1 | 0.022 | ||
Pknox1 | Pbx/knotted 1 homeobox | 0.022 | ||
Ddx20 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 | 0.022 | ||
Ash1l | ash1 (absent, small, or homeotic)-like (Drosophila) | 0.021 | ||
Rfwd3 | ring finger and WD repeat domain 3 | 0.021 | ||
Rcor2 | REST corepressor 2 | 0.021 | ||
Sfrs18 | serine/arginine-rich splicing factor 18 | 0.021 | ||
Srrm1 | serine/arginine repetitive matrix 1 | 0.021 | ||
Smpd4 | sphingomyelin phosphodiesterase 4 | 0.021 | ||
Pou5f1 | POU domain, class 5, transcription factor 1 | 0.021 | ||
Zzef1 | zinc finger, ZZ-type with EF hand domain 1 | 0.021 | ||
Phrf1 | PHD and ring finger domains 1 | 0.021 | ||
Srsf4 | serine/arginine-rich splicing factor 4 | 0.020 | ||
Morc2a | microrchidia 2A | 0.020 | ||
Lrwd1 | leucine-rich repeats and WD repeat domain containing 1 | 0.020 | ||
Kdm5a | lysine (K)-specific demethylase 5A | 0.020 | ||
Rere | arginine glutamic acid dipeptide (RE) repeats | 0.020 | ||
Mga | MAX gene associated | 0.020 | ||
Zfp598 | zinc finger protein 598 | 0.020 | ||
Cbx8 | chromobox homolog 8 (Drosophila Pc class) | 0.019 | ||
Rfx7 | regulatory factor X, 7 | 0.019 | ||
Jarid2 | jumonji, AT rich interactive domain 2 | 0.019 | ||
Rnf44 | ring finger protein 44 | 0.019 | ||
Phf20 | PHD finger protein 20 | 0.019 | ||
Kcnj5 | potassium inwardly-rectifying channel, subfamily J, member 5 | 0.018 | ||
Prrc2c | proline-rich coiled-coil 2C | 0.018 | ||
Clk2 | CDC-like kinase 2 | 0.018 | ||
Smg1 | SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) | 0.018 | ||
Pom121 | nuclear pore membrane protein 121 | 0.018 | ||
Pitpnb | phosphatidylinositol transfer protein, beta | 0.018 | ||
Dhx8 | DEAH (Asp-Glu-Ala-His) box polypeptide 8 | 0.018 | ||
Klhl24 | kelch-like 24 (Drosophila) | 0.018 | ||
Gpatch8 | G patch domain containing 8 | 0.018 | ||
Gata6 | GATA binding protein 6 | 0.017 | Mouse | |
Braf | Braf transforming gene | 0.017 | ||
Pcnxl3 | pecanex-like 3 (Drosophila) | 0.017 | ||
Ehmt1 | euchromatic histone methyltransferase 1 | 0.017 | ||
Mycbp2 | MYC binding protein 2 | 0.017 | ||
Ehmt2 | euchromatic histone lysine N-methyltransferase 2 | 0.017 | ||
Hey2 | hairy/enhancer-of-split related with YRPW motif 2 | 0.017 | ||
Mesp1 | mesoderm posterior 1 | 0.017 | ||
Tmem200b | transmembrane protein 200B | 0.017 | ||
Myf5 | myogenic factor 5 | 0.017 | ||
Epor | erythropoietin receptor | 0.017 | ||
Rbm14 | RNA binding motif protein 14 | 0.017 | ||
Zfp398 | zinc finger protein 398 | 0.017 | ||
Brpf1 | bromodomain and PHD finger containing, 1 | 0.016 | ||
Xpo6 | exportin 6 | 0.016 | ||
Fam168b | family with sequence similarity 168, member B | 0.016 | ||
Srpk1 | serine/arginine-rich protein specific kinase 1 | 0.016 | ||
Smc3 | structural maintenace of chromosomes 3 | 0.016 | ||
Isg20l2 | interferon stimulated exonuclease gene 20-like 2 | 0.016 | ||
Orc6 | origin recognition complex, subunit 6 | 0.016 | ||
Rybp | RING1 and YY1 binding protein | 0.016 | ||
Prrc2b | proline-rich coiled-coil 2B | 0.016 | ||
Itsn2 | intersectin 2 | 0.016 | ||
Nfe2 | nuclear factor, erythroid derived 2 | 0.016 | ||
Apc | adenomatosis polyposis coli | 0.016 | ||
Pabpn1 | poly(A) binding protein, nuclear 1 | 0.016 | ||
Herc1 | hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 | 0.016 | ||
Dgcr8 | DiGeorge syndrome critical region gene 8 | 0.016 | ||
Spnb2 | spectrin beta 2 | 0.015 | ||
Mecp2 | methyl CpG binding protein 2 | 0.015 | ||
Hoxa1 | homeobox A1 | 0.015 | ||
Sin3a | transcriptional regulator, SIN3A (yeast) | 0.015 | ||
Yeats2 | YEATS domain containing 2 | 0.015 | ||
Smad4 | MAD homolog 4 (Drosophila) | 0.015 | ||
Tbx5 | T-box 5 | 0.015 | ||
Setdb1 | SET domain, bifurcated 1 | 0.015 | ||
P2rx1 | purinergic receptor P2X, ligand-gated ion channel, 1 | 0.015 | ||
L3mbtl2 | l(3)mbt-like 2 (Drosophila) | 0.015 | ||
Ldb1 | LIM domain binding 1 | 0.015 | ||
Zmym2 | zinc finger, MYM-type 2 | 0.015 | ||
Zfpm1 | zinc finger protein, multitype 1 | 0.015 | ||
Suv39h1 | suppressor of variegation 3-9 homolog 1 (Drosophila) | 0.015 | ||
Smc1a | structural maintenance of chromosomes 1A | 0.014 | ||
Dll1 | delta-like 1 (Drosophila) | 0.014 | ||
Ankrd12 | ankyrin repeat domain 12 | 0.014 | ||
Scn5a | sodium channel, voltage-gated, type V, alpha | 0.014 | ||
Rbm22 | RNA binding motif protein 22 | 0.014 | ||
Ctr9 | Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) | 0.014 | ||
Muc13 | mucin 13, epithelial transmembrane | 0.014 | ||
Ncoa5 | nuclear receptor coactivator 5 | 0.014 | ||
Lats1 | large tumor suppressor | 0.014 | ||
Prpf3 | PRP3 pre-mRNA processing factor 3 homolog (yeast) | 0.014 | ||
Kiss1 | KiSS-1 metastasis-suppressor | 0.014 | ||
Fam48a | family with sequence similarity 48, member A | 0.014 | ||
Rab23 | RAB23, member RAS oncogene family | 0.014 | ||
Pafah1b2 | platelet-activating factor acetylhydrolase, isoform 1b, subunit 2 | 0.014 | ||
Mcmbp | MCM (minichromosome maintenance deficient) binding protein | 0.014 | ||
Zfp292 | zinc finger protein 292 | 0.014 | ||
Tbx3 | T-box 3 | 0.014 | ||
Man1a2 | mannosidase, alpha, class 1A, member 2 | 0.013 | ||
Srsf2 | serine/arginine-rich splicing factor 2 | 0.013 | ||
Polr2a | polymerase (RNA) II (DNA directed) polypeptide A | 0.013 | ||
Gata5 | GATA binding protein 5 | 0.013 | Mouse | |
Tmprss2 | transmembrane protease, serine 2 | 0.013 | ||
Zfp236 | zinc finger protein 236 | 0.013 | ||
Hmg20a | high mobility group 20A | 0.013 | ||
Dcaf7 | DDB1 and CUL4 associated factor 7 | 0.013 | ||
Fbrs | fibrosin | 0.013 | ||
Ermap | erythroblast membrane-associated protein | 0.013 | ||
Ep300 | E1A binding protein p300 | 0.013 | ||
Nolc1 | nucleolar and coiled-body phosphoprotein 1 | 0.013 | ||
Mbd6 | methyl-CpG binding domain protein 6 | 0.013 | ||
Gsk3b | glycogen synthase kinase 3 beta | 0.013 | ||
Atad5 | ATPase family, AAA domain containing 5 | 0.013 | ||
Ckap5 | cytoskeleton associated protein 5 | 0.013 | ||
Ctdp1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 | 0.013 | ||
Cramp1l | Crm, cramped-like (Drosophila) | 0.013 | ||
Jak2 | Janus kinase 2 | 0.013 | ||
Hnrnpa0 | heterogeneous nuclear ribonucleoprotein A0 | 0.012 | ||
Aqr | aquarius | 0.012 | ||
Med14 | mediator complex subunit 14 | 0.012 | ||
Usp7 | ubiquitin specific peptidase 7 | 0.012 | ||
Pum1 | pumilio 1 (Drosophila) | 0.012 | ||
Mcm4 | minichromosome maintenance deficient 4 homolog (S. cerevisiae) | 0.012 | ||
Blm | Bloom syndrome, RecQ helicase-like | 0.012 | ||
Rnf168 | ring finger protein 168 | 0.012 | ||
Senp7 | SUMO1/sentrin specific peptidase 7 | 0.012 | ||
Cpsf7 | cleavage and polyadenylation specific factor 7 | 0.012 | ||
Nvl | nuclear VCP-like | 0.012 | ||
Rxra | retinoid X receptor alpha | 0.012 | ||
Hba-x | hemoglobin X, alpha-like embryonic chain in Hba complex | 0.012 | ||
Atxn7 | ataxin 7 | 0.012 | ||
She | src homology 2 domain-containing transforming protein E | 0.012 | ||
Cbx3 | chromobox homolog 3 (Drosophila HP1 gamma) | 0.012 | ||
Zbtb16 | zinc finger and BTB domain containing 16 | 0.012 | ||
Brd8 | bromodomain containing 8 | 0.012 | ||
Rbbp4 | retinoblastoma binding protein 4 | 0.012 | ||
Hic2 | hypermethylated in cancer 2 | 0.012 | ||
Xpo5 | exportin 5 | 0.012 | ||
Helz | helicase with zinc finger domain | 0.012 | ||
Gclc | glutamate-cysteine ligase, catalytic subunit | 0.012 | ||
Spen | SPEN homolog, transcriptional regulator (Drosophila) | 0.012 | ||
Dnmt3l | DNA (cytosine-5-)-methyltransferase 3-like | 0.012 | ||
Traf7 | TNF receptor-associated factor 7 | 0.011 | ||
9030409G11Rik | RIKEN cDNA 9030409G11 gene | 0.011 | ||
E2f3 | E2F transcription factor 3 | 0.011 | ||
Rapgef6 | Rap guanine nucleotide exchange factor (GEF) 6 | 0.011 | ||
Prmt3 | protein arginine N-methyltransferase 3 | 0.011 | ||
Slc38a5 | solute carrier family 38, member 5 | 0.011 | ||
Slc6a4 | solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 | 0.011 | ||
Blmh | bleomycin hydrolase | 0.011 | ||
Abl2 | v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene) | 0.011 | ||
Nfya | nuclear transcription factor-Y alpha | 0.011 | ||
Zmynd8 | zinc finger, MYND-type containing 8 | 0.011 | ||
Bap1 | Brca1 associated protein 1 | 0.011 | ||
Hemgn | hemogen | 0.011 | ||
Stc2 | stanniocalcin 2 | 0.011 | ||
Tbc1d23 | TBC1 domain family, member 23 | 0.011 | ||
Zbtb46 | zinc finger and BTB domain containing 46 | 0.011 | ||
Atp2b1 | ATPase, Ca++ transporting, plasma membrane 1 | 0.011 | ||
Sap130 | Sin3A associated protein | 0.011 | ||
Csrp2bp | cysteine and glycine-rich protein 2 binding protein | 0.011 | ||
Efnb2 | ephrin B2 | 0.011 | ||
Polm | polymerase (DNA directed), mu | 0.011 | ||
Tspyl1 | testis-specific protein, Y-encoded-like 1 | 0.011 | ||
Nck2 | non-catalytic region of tyrosine kinase adaptor protein 2 | 0.011 | ||
Ccnt2 | cyclin T2 | 0.011 | ||
Taok1 | TAO kinase 1 | 0.010 | ||
Cpsf4 | cleavage and polyadenylation specific factor 4 | 0.010 | ||
Sp4 | trans-acting transcription factor 4 | 0.010 | ||
Hcfc1 | host cell factor C1 | 0.010 | ||
Ncoa3 | nuclear receptor coactivator 3 | 0.010 | ||
Cdan1 | congenital dyserythropoietic anemia, type I (human) | 0.010 | ||
Eml4 | echinoderm microtubule associated protein like 4 | 0.010 | ||
Hoxa4 | homeobox A4 | 0.010 | ||
Zfp60 | zinc finger protein 60 | 0.010 | ||
Adam19 | a disintegrin and metallopeptidase domain 19 (meltrin beta) | 0.010 | ||
Gypa | glycophorin A | 0.010 | ||
Rnps1 | ribonucleic acid binding protein S1 | 0.010 | ||
2410002F23Rik | RIKEN cDNA 2410002F23 gene | 0.010 | ||
Taf5l | TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor | 0.010 | ||
Alms1 | Alstrom syndrome 1 homolog (human) | 0.010 | ||
Rfx3 | regulatory factor X, 3 (influences HLA class II expression) | 0.010 | ||
Ski | ski sarcoma viral oncogene homolog (avian) | 0.010 | ||
Hoxb4 | homeobox B4 | 0.010 | ||
Ewsr1 | Ewing sarcoma breakpoint region 1 | 0.010 | ||
Top2b | topoisomerase (DNA) II beta | 0.010 |