IMP: Integrative Multi-species Prediction

Mus musculus

13 genes annotated in mouse

Multi-species View

pigment granule localization

GO:0051875

Any process in which a pigment granule is transported to, and/or maintained in, a specific location within the cell.

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Known genes in the process in mouseInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "pigment granule localization"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "pigment granule localization" (in gray)

Name	Description	Probability	Func Analog Organism
Lyst	lysosomal trafficking regulator	1.000
Rab27a	RAB27A, member RAS oncogene family	1.000
a	nonagouti	0.999
Hps1	Hermansky-Pudlak syndrome 1 homolog (human)	0.997
Bbs4	Bardet-Biedl syndrome 4 (human)	0.997	Zebrafish
Bbs1	Bardet-Biedl syndrome 1 (human)	0.994
Mlph	melanophilin	0.992
Mitf	microphthalmia-associated transcription factor	0.991
Tyrp1	tyrosinase-related protein 1	0.991
Bbs2	Bardet-Biedl syndrome 2 (human)	0.986	Zebrafish
Oca2	oculocutaneous albinism II	0.983
Ap3b1	adaptor-related protein complex 3, beta 1 subunit	0.972
Tyr	tyrosinase	0.969
Hps5	Hermansky-Pudlak syndrome 5 homolog (human)	0.967
Cno	cappuccino	0.954
Hps6	Hermansky-Pudlak syndrome 6	0.832
Pldn	pallidin	0.728	Human
Mc1r	melanocortin 1 receptor	0.436
Stx12	syntaxin 12	0.335
Rab11a	RAB11a, member RAS oncogene family	0.333
Rheb	Ras homolog enriched in brain	0.327
Pmel	premelanosome protein	0.261
Pomc	pro-opiomelanocortin-alpha	0.249	Zebrafish
Ttc8	tetratricopeptide repeat domain 8	0.226
Rab38	RAB38, member of RAS oncogene family	0.222
Ap3d1	adaptor-related protein complex 3, delta 1 subunit	0.213
Muted	muted	0.212
Slc45a2	solute carrier family 45, member 2	0.203
Sytl5	synaptotagmin-like 5	0.200
Hps3	Hermansky-Pudlak syndrome 3 homolog (human)	0.191
Chmp1b	chromatin modifying protein 1B	0.167
Fkbp8	FK506 binding protein 8	0.160
Bbs5	Bardet-Biedl syndrome 5 (human)	0.149
Cyp11a1	cytochrome P450, family 11, subfamily a, polypeptide 1	0.146
Stx7	syntaxin 7	0.145
Hps4	Hermansky-Pudlak syndrome 4 homolog (human)	0.125
Lep	leptin	0.110
Nptn	neuroplastin	0.109
Bbs9	Bardet-Biedl syndrome 9 (human)	0.109
Myo5a	myosin VA	0.108
Atp6ap2	ATPase, H+ transporting, lysosomal accessory protein 2	0.106
Prf1	perforin 1 (pore forming protein)	0.089
Tmem30a	transmembrane protein 30A	0.089
Add1	adducin 1 (alpha)	0.085
Atp6v1d	ATPase, H+ transporting, lysosomal V1 subunit D	0.083
Elf3	E74-like factor 3	0.080
Kit	kit oncogene	0.077
Bbs7	Bardet-Biedl syndrome 7 (human)	0.074
Arl6	ADP-ribosylation factor-like 6	0.074	Zebrafish
Csnk1g2	casein kinase 1, gamma 2	0.067
Drap1	Dr1 associated protein 1 (negative cofactor 2 alpha)	0.066
Sh3glb2	SH3-domain GRB2-like endophilin B2	0.062
Ap2s1	adaptor-related protein complex 2, sigma 1 subunit	0.060
Rnf103	ring finger protein 103	0.058
Ins2	insulin II	0.054
Pi4kb	phosphatidylinositol 4-kinase, catalytic, beta polypeptide	0.052
Ndfip1	Nedd4 family interacting protein 1	0.050
Spna2	spectrin alpha 2	0.048
Pde8b	phosphodiesterase 8B	0.048
Fam83g	family with sequence similarity 83, member G	0.047
Rab27b	RAB27b, member RAS oncogene family	0.047	Mouse
Kcnq1	potassium voltage-gated channel, subfamily Q, member 1	0.046
Fmn1	formin 1	0.045
Dnajb9	DnaJ (Hsp40) homolog, subfamily B, member 9	0.044
Lepr	leptin receptor	0.043
Pef1	penta-EF hand domain containing 1	0.043
Vapa	vesicle-associated membrane protein, associated protein A	0.042
Uso1	USO1 homolog, vesicle docking protein (yeast)	0.042
Npy2r	neuropeptide Y receptor Y2	0.041
Rab25	RAB25, member RAS oncogene family	0.041	Mouse
Otp	orthopedia homolog (Drosophila)	0.040
Nos1	nitric oxide synthase 1, neuronal	0.040
Thrb	thyroid hormone receptor beta	0.039
Mlf2	myeloid leukemia factor 2	0.038
Tbk1	TANK-binding kinase 1	0.037
Rab6	RAB6, member RAS oncogene family	0.037
Psap	prosaposin	0.036
Mobkl3	MOB1, Mps One Binder kinase activator-like 3 (yeast)	0.036
Mapk3	mitogen-activated protein kinase 3	0.036
C78339	expressed sequence C78339	0.036
Capn1	calpain 1	0.035
Wwox	WW domain-containing oxidoreductase	0.034
Capns1	calpain, small subunit 1	0.034
Slc24a5	solute carrier family 24, member 5	0.033
Mkks	McKusick-Kaufman syndrome protein	0.033	Zebrafish
Stxbp3a	syntaxin binding protein 3A	0.032
Vamp4	vesicle-associated membrane protein 4	0.031
Atp6v1c1	ATPase, H+ transporting, lysosomal V1 subunit C1	0.031
Gng3	guanine nucleotide binding protein (G protein), gamma 3	0.030
Tff1	trefoil factor 1	0.030
Sec23a	SEC23A (S. cerevisiae)	0.030
Sox15	SRY-box containing gene 15	0.030
Ccdc64	coiled-coil domain containing 64	0.029
Ubxn6	UBX domain protein 6	0.029
Exoc7	exocyst complex component 7	0.029
Cldn2	claudin 2	0.028
Amelx	amelogenin X chromosome	0.028
Chmp5	chromatin modifying protein 5	0.028
Ubl7	ubiquitin-like 7 (bone marrow stromal cell-derived)	0.027
Ggt1	gamma-glutamyltransferase 1	0.027
Dstn	destrin	0.027
Nsf	N-ethylmaleimide sensitive fusion protein	0.026
Chmp2b	chromatin modifying protein 2B	0.026
Arfip1	ADP-ribosylation factor interacting protein 1	0.026
Shh	sonic hedgehog	0.025
Stx11	syntaxin 11	0.025
Cblc	Casitas B-lineage lymphoma c	0.024
Ush1c	Usher syndrome 1C homolog (human)	0.024
Ntrk2	neurotrophic tyrosine kinase, receptor, type 2	0.023
Prr15	proline rich 15	0.023
Gpd2	glycerol phosphate dehydrogenase 2, mitochondrial	0.023
Asah1	N-acylsphingosine amidohydrolase 1	0.022
Rragc	Ras-related GTP binding C	0.022
Crb3	crumbs homolog 3 (Drosophila)	0.022
2810422J05Rik	RIKEN cDNA 2810422J05 gene	0.022
Dtnbp1	dystrobrevin binding protein 1	0.022
Rapsn	receptor-associated protein of the synapse	0.021
Fbxw5	F-box and WD-40 domain protein 5	0.021
Arl1	ADP-ribosylation factor-like 1	0.021
3110043O21Rik	RIKEN cDNA 3110043O21 gene	0.021
Rnf11	ring finger protein 11	0.020
Bsg	basigin	0.020
Trpm1	transient receptor potential cation channel, subfamily M, member 1	0.020
Eda	ectodysplasin-A	0.019
Myo6	myosin VI	0.019
Pld3	phospholipase D family, member 3	0.019
Aes	amino-terminal enhancer of split	0.019
Nus1	nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	0.018
Dctn1	dynactin 1	0.018
Cltc	clathrin, heavy polypeptide (Hc)	0.018
Oaz2-ps	ornithine decarboxylase antizyme 2, pseudogene	0.018
Hiatl1	hippocampus abundant transcript-like 1	0.017
Ap2m1	adaptor protein complex AP-2, mu1	0.017
Nipsnap3b	nipsnap homolog 3B (C. elegans)	0.017
Esr1	estrogen receptor 1 (alpha)	0.017
Mat2b	methionine adenosyltransferase II, beta	0.017
9130017N09Rik	RIKEN cDNA 9130017N09 gene	0.016
Arl6ip5	ADP-ribosylation factor-like 6 interacting protein 5	0.016
Vps4a	vacuolar protein sorting 4a (yeast)	0.016
Npy1r	neuropeptide Y receptor Y1	0.016
Krtap12-1	keratin associated protein 12-1	0.016
Unc50	unc-50 homolog (C. elegans)	0.016
Chuk	conserved helix-loop-helix ubiquitous kinase	0.016
Stx4a	syntaxin 4A (placental)	0.016
Dppa5a	developmental pluripotency associated 5A	0.016
Btbd10	BTB (POZ) domain containing 10	0.016
Ift88	intraflagellar transport 88 homolog (Chlamydomonas)	0.016
Gpr98	G protein-coupled receptor 98	0.016
Selk	selenoprotein K	0.016
Akap8l	A kinase (PRKA) anchor protein 8-like	0.016
Atp1a1	ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.016
Gnb2	guanine nucleotide binding protein (G protein), beta 2	0.015
Bloc1s3	biogenesis of lysosome-related organelles complex-1, subunit 3	0.015
Chrm5	cholinergic receptor, muscarinic 5	0.015
Mab21l2	mab-21-like 2 (C. elegans)	0.015
Rab2a	RAB2A, member RAS oncogene family	0.015
Wsb2	WD repeat and SOCS box-containing 2	0.015
Slc22a18	solute carrier family 22 (organic cation transporter), member 18	0.015
Pacrg	PARK2 co-regulated	0.015
Sntb1	syntrophin, basic 1	0.015
Chmp4b	chromatin modifying protein 4B	0.015
Abhd12	abhydrolase domain containing 12	0.015
Anapc2	anaphase promoting complex subunit 2	0.015
Rap1b	RAS related protein 1b	0.015
Ehf	ets homologous factor	0.015
Flot1	flotillin 1	0.015
Cldn7	claudin 7	0.014
Ppp2ca	protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	0.014
Plcg1	phospholipase C, gamma 1	0.014
Calm1	calmodulin 1	0.014
Mtmr6	myotubularin related protein 6	0.014
Slc44a4	solute carrier family 44, member 4	0.014
Epn3	epsin 3	0.014
Actr3	ARP3 actin-related protein 3 homolog (yeast)	0.014
Dbnl	drebrin-like	0.013
Sytl1	synaptotagmin-like 1	0.013
Dctn2	dynactin 2	0.013
Mapre3	microtubule-associated protein, RP/EB family, member 3	0.013
Alox12e	arachidonate lipoxygenase, epidermal	0.013
Akirin1	akirin 1	0.013
Rbbp9	retinoblastoma binding protein 9	0.013
Gal	galanin	0.013
Ap3s1	adaptor-related protein complex 3, sigma 1 subunit	0.013
Gnptab	N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	0.013
Tusc3	tumor suppressor candidate 3	0.013
Gh	growth hormone	0.013
Tmem82	transmembrane protein 82	0.013
Phlda2	pleckstrin homology-like domain, family A, member 2	0.013
Syap1	synapse associated protein 1	0.013
Cpeb4	cytoplasmic polyadenylation element binding protein 4	0.013
Col4a3	collagen, type IV, alpha 3	0.013
Max	Max protein	0.012
Cyhr1	cysteine and histidine rich 1	0.012
Espn	espin	0.012
Sgta	small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	0.012
Gnas	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	0.012
Marveld3	MARVEL (membrane-associating) domain containing 3	0.012
Txndc17	thioredoxin domain containing 17	0.012
Klk1b3	kallikrein 1-related peptidase b3	0.012
Insr	insulin receptor	0.012
Tcfap2b	transcription factor AP-2 beta	0.012
Barx2	BarH-like homeobox 2	0.012
Adam9	a disintegrin and metallopeptidase domain 9 (meltrin gamma)	0.012
Rrp1	ribosomal RNA processing 1 homolog (S. cerevisiae)	0.012
Cdcp1	CUB domain containing protein 1	0.012
Rab17	RAB17, member RAS oncogene family	0.012
Tax1bp1	Tax1 (human T-cell leukemia virus type I) binding protein 1	0.012
Golga2	golgi autoantigen, golgin subfamily a, 2	0.012
Atp6v1a	ATPase, H+ transporting, lysosomal V1 subunit A	0.012
Atp6v1g1	ATPase, H+ transporting, lysosomal V1 subunit G1	0.012
Hoxa13	homeobox A13	0.012
Hoxb13	homeobox B13	0.012
Arhgef16	Rho guanine nucleotide exchange factor (GEF) 16	0.012
2410004B18Rik	RIKEN cDNA 2410004B18 gene	0.012
Nr3c1	nuclear receptor subfamily 3, group C, member 1	0.012
Cldn3	claudin 3	0.012
Tff3	trefoil factor 3, intestinal	0.012
Rraga	Ras-related GTP binding A	0.011
Pdcd10	programmed cell death 10	0.011
Lad1	ladinin	0.011
Akr1b7	aldo-keto reductase family 1, member B7	0.011
Mapk13	mitogen-activated protein kinase 13	0.011
Tmprss2	transmembrane protease, serine 2	0.011
Rnf115	ring finger protein 115	0.011
Il17re	interleukin 17 receptor E	0.011
Apoe	apolipoprotein E	0.011
Hdac5	histone deacetylase 5	0.011
Tspyl4	TSPY-like 4	0.011
Fam49b	family with sequence similarity 49, member B	0.011
Tctex1d2	Tctex1 domain containing 2	0.011
Golga7	golgi autoantigen, golgin subfamily a, 7	0.011
Clrn3	clarin 3	0.011
Snx16	sorting nexin 16	0.011
Ccdc64b	coiled-coil domain containing 64B	0.011
Lamb3	laminin, beta 3	0.011
Golph3	golgi phosphoprotein 3	0.011
Klraq1	KLRAQ motif containing 1	0.011
Zc3h12d	zinc finger CCCH type containing 12D	0.010
Vill	villin-like	0.010
Eps8	epidermal growth factor receptor pathway substrate 8	0.010
Clptm1	cleft lip and palate associated transmembrane protein 1	0.010
Sptlc2	serine palmitoyltransferase, long chain base subunit 2	0.010
Ywhag	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	0.010
Kitl	kit ligand	0.010
Tbx15	T-box 15	0.010
Arhgap1	Rho GTPase activating protein 1	0.010
Vil1	villin 1	0.010
Napa	N-ethylmaleimide sensitive fusion protein attachment protein alpha	0.010
Ap1m2	adaptor protein complex AP-1, mu 2 subunit	0.010
Lamp2	lysosomal-associated membrane protein 2	0.010
Pex5	peroxisomal biogenesis factor 5	0.010
Kdelr1	KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	0.010