IMP: Integrative Multi-species Prediction

Mus musculus

16 genes annotated in mouse

Multi-species View

chromatin assembly or disassembly

GO:0006333

The formation or destruction of chromatin structures.

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Known genes in the process in mouseInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "chromatin assembly or disassembly"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "chromatin assembly or disassembly" (in gray)

Name	Description	Probability	Func Analog Organism
Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	1.000	Human Yeast Rat
Smarcc1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	1.000	Human
Arid1a	AT rich interactive domain 1A (SWI-like)	0.994	Human
Pou5f1	POU domain, class 5, transcription factor 1	0.992
Smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	0.943
Smc3	structural maintenace of chromosomes 3	0.815
H3f3a	H3 histone, family 3A	0.721	Human
Arid1b	AT rich interactive domain 1B (SWI-like)	0.716
H2afz	H2A histone family, member Z	0.675
Ezh2	enhancer of zeste homolog 2 (Drosophila)	0.640
Hist1h3g	histone cluster 1, H3g	0.575
Trim28	tripartite motif-containing 28	0.433
Creb1	cAMP responsive element binding protein 1	0.393
Cbx1	chromobox homolog 1 (Drosophila HP1 beta)	0.374	Fly
Tcfcp2l1	transcription factor CP2-like 1	0.366
Hist2h3c1	histone cluster 2, H3c1	0.224
Chaf1a	chromatin assembly factor 1, subunit A (p150)	0.222	Human
Chd4	chromodomain helicase DNA binding protein 4	0.221
Hist1h2bp	histone cluster 1, H2bp	0.175	Yeast Mouse
Cbx5	chromobox homolog 5 (Drosophila HP1a)	0.170	Fly
Mta1	metastasis associated 1	0.147
Smc1a	structural maintenance of chromosomes 1A	0.138
Brd4	bromodomain containing 4	0.137
Smarca2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	0.135	Yeast
Fmr1	fragile X mental retardation syndrome 1 homolog	0.131	Fly
Trim24	tripartite motif-containing 24	0.127
Hist1h1c	histone cluster 1, H1c	0.121
Sall4	sal-like 4 (Drosophila)	0.120
Orc1	origin recognition complex, subunit 1	0.119
Mcm4	minichromosome maintenance deficient 4 homolog (S. cerevisiae)	0.119
Hist1h4m	histone cluster 1, H4m	0.107
Hist1h2bc	histone cluster 1, H2bc	0.107	Mouse
Dtl	denticleless homolog (Drosophila)	0.099
Top2b	topoisomerase (DNA) II beta	0.099	Yeast
Hist1h1b	histone cluster 1, H1b	0.097
Dnmt3a	DNA methyltransferase 3A	0.088
Cdk1	cyclin-dependent kinase 1	0.077
Smarcd3	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3	0.073	Human
Supt16h	suppressor of Ty 16 homolog (S. cerevisiae)	0.072
Hist1h2br	histone cluster 1 H2br	0.068
Hist2h4	histone cluster 2, H4	0.067
Suz12	suppressor of zeste 12 homolog (Drosophila)	0.064
Hnrnpd	heterogeneous nuclear ribonucleoprotein D	0.063
Arid2	AT rich interactive domain 2 (ARID, RFX-like)	0.062	Human
Uhrf1	ubiquitin-like, containing PHD and RING finger domains, 1	0.061
Mcm3	minichromosome maintenance deficient 3 (S. cerevisiae)	0.060
Usp7	ubiquitin specific peptidase 7	0.058
Cbx3	chromobox homolog 3 (Drosophila HP1 gamma)	0.056	Fly
Tax1bp1	Tax1 (human T-cell leukemia virus type I) binding protein 1	0.056
Arid4b	AT rich interactive domain 4B (RBP1-like)	0.056
Hist1h2bb	histone cluster 1, H2bb	0.055	Mouse
Nucks1	nuclear casein kinase and cyclin-dependent kinase substrate 1	0.054
Cdt1	chromatin licensing and DNA replication factor 1	0.054
Thoc2	THO complex 2	0.050
Smarcc2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	0.050	Human
Ewsr1	Ewing sarcoma breakpoint region 1	0.050
Ccne1	cyclin E1	0.049
Nap1l2	nucleosome assembly protein 1-like 2	0.049
Asf1a	ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	0.048	Mouse
Topbp1	topoisomerase (DNA) II binding protein 1	0.047
Chek1	checkpoint kinase 1 homolog (S. pombe)	0.046
Bptf	bromodomain PHD finger transcription factor	0.042
Cenpk	centromere protein K	0.041
Hist3h2bb-ps	histone cluster 3, H2bb, pseudogene	0.039
Gatad2b	GATA zinc finger domain containing 2B	0.037
Baz1b	bromodomain adjacent to zinc finger domain, 1B	0.037
Anp32b	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	0.036	Human
Sfpq	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)	0.036
Ilf3	interleukin enhancer binding factor 3	0.035
Crebbp	CREB binding protein	0.034
Dek	DEK oncogene (DNA binding)	0.034
Rfx2	regulatory factor X, 2 (influences HLA class II expression)	0.033
Rfc2	replication factor C (activator 1) 2	0.032
Dnmt3b	DNA methyltransferase 3B	0.032
Zscan4b	zinc finger and SCAN domain containing 4B	0.032
Nasp	nuclear autoantigenic sperm protein (histone-binding)	0.031	Human
Ubtf	upstream binding transcription factor, RNA polymerase I	0.030
Scaf11	SR-related CTD-associated factor 11	0.029
Smarcb1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	0.029	Human
Hist2h2aa2	histone cluster 2, H2aa2	0.028
Nono	non-POU-domain-containing, octamer binding protein	0.028
Hist1h1e	histone cluster 1, H1e	0.027
Polr2a	polymerase (RNA) II (DNA directed) polypeptide A	0.027
L3mbtl2	l(3)mbt-like 2 (Drosophila)	0.027
Hmga1	high mobility group AT-hook 1	0.027	Human
Trrap	transformation/transcription domain-associated protein	0.027
E2f8	E2F transcription factor 8	0.027
Rnf2	ring finger protein 2	0.026
Utp3	UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	0.026
Taf3	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	0.025
Acin1	apoptotic chromatin condensation inducer 1	0.025
Slbp	stem-loop binding protein	0.025
Hist2h2ab	histone cluster 2, H2ab	0.025
Cdca5	cell division cycle associated 5	0.025
Pum1	pumilio 1 (Drosophila)	0.025
Zmym2	zinc finger, MYM-type 2	0.024
Smarcd1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	0.024	Human Fly
Cdc6	cell division cycle 6 homolog (S. cerevisiae)	0.024
Tceal1	transcription elongation factor A (SII)-like 1	0.023
Arid3b	AT rich interactive domain 3B (BRIGHT-like)	0.023
Pola1	polymerase (DNA directed), alpha 1	0.023
Brd1	bromodomain containing 1	0.023
Cdk2	cyclin-dependent kinase 2	0.023
Cdca7	cell division cycle associated 7	0.022
Dna2	DNA replication helicase 2 homolog (yeast)	0.022
Eif2c2	eukaryotic translation initiation factor 2C, 2	0.022
Srrm2	serine/arginine repetitive matrix 2	0.022
Mcm2	minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	0.022
Cyld	cylindromatosis (turban tumor syndrome)	0.021
Mga	MAX gene associated	0.021
Nacc1	nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	0.021
Smarce1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.021
Rbm14	RNA binding motif protein 14	0.021
Hist1h2bm	histone cluster 1, H2bm	0.020	Yeast Mouse
Syce2	synaptonemal complex central element protein 2	0.020
Fxr1	fragile X mental retardation gene 1, autosomal homolog	0.019	Fly
Chd8	chromodomain helicase DNA binding protein 8	0.019
Scaf4	SR-related CTD-associated factor 4	0.019
Syncrip	synaptotagmin binding, cytoplasmic RNA interacting protein	0.019
C330027C09Rik	RIKEN cDNA C330027C09 gene	0.019
Mta3	metastasis associated 3	0.019
Wdhd1	WD repeat and HMG-box DNA binding protein 1	0.018
Nup62	nucleoporin 62	0.018
Dnajc9	DnaJ (Hsp40) homolog, subfamily C, member 9	0.018
Mll3	myeloid/lymphoid or mixed-lineage leukemia 3	0.018
Zfx	zinc finger protein X-linked	0.018
Hnrnpu	heterogeneous nuclear ribonucleoprotein U	0.018
Casp8ap2	caspase 8 associated protein 2	0.018
Tcf19	transcription factor 19	0.017
Kif4	kinesin family member 4	0.017
Snw1	SNW domain containing 1	0.017
Ddx6	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	0.017
Hist1h2bk	histone cluster 1, H2bk	0.016	Mouse
Rrm2	ribonucleotide reductase M2	0.016
Smc4	structural maintenance of chromosomes 4	0.016
Lin9	lin-9 homolog (C. elegans)	0.016
Hist1h2aa	histone cluster 1, H2aa	0.016
Cdca8	cell division cycle associated 8	0.016
Rybp	RING1 and YY1 binding protein	0.016
Whsc1	Wolf-Hirschhorn syndrome candidate 1 (human)	0.016
Vezf1	vascular endothelial zinc finger 1	0.015
Yy1	YY1 transcription factor	0.015
Zfp219	zinc finger protein 219	0.015
Gata1	GATA binding protein 1	0.015
Msh2	mutS homolog 2 (E. coli)	0.015
H2afy	H2A histone family, member Y	0.014
Tmem64	transmembrane protein 64	0.014
Hmgb1	high mobility group box 1	0.014
Ccne2	cyclin E2	0.014
Sgol1	shugoshin-like 1 (S. pombe)	0.014
U2af2	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	0.014
Pole2	polymerase (DNA directed), epsilon 2 (p59 subunit)	0.014
Cbfa2t3	core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	0.014
Smc2	structural maintenance of chromosomes 2	0.014
Gsk3b	glycogen synthase kinase 3 beta	0.013
Hist1h1d	histone cluster 1, H1d	0.013
Nfrkb	nuclear factor related to kappa B binding protein	0.013
Hist2h3c2-ps	histone cluster 2, H3c2, pseudogene	0.013
Zfp462	zinc finger protein 462	0.013
Numa1	nuclear mitotic apparatus protein 1	0.013
Hist1h3a	histone cluster 1, H3a	0.013	Human
Mybl2	myeloblastosis oncogene-like 2	0.013
Mecp2	methyl CpG binding protein 2	0.013
Tcf12	transcription factor 12	0.013
Rassf1	Ras association (RalGDS/AF-6) domain family member 1	0.013
Sp4	trans-acting transcription factor 4	0.013
Thoc4	THO complex 4	0.013
Pcbp2	poly(rC) binding protein 2	0.013
Lig1	ligase I, DNA, ATP-dependent	0.013
Pml	promyelocytic leukemia	0.013
Rfx7	regulatory factor X, 7	0.013
Phip	pleckstrin homology domain interacting protein	0.012
Kdm6b	KDM1 lysine (K)-specific demethylase 6B	0.012
Grb10	growth factor receptor bound protein 10	0.012
Anp32e	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	0.012
Tmem40	transmembrane protein 40	0.012
Ep300	E1A binding protein p300	0.012
Eif4g1	eukaryotic translation initiation factor 4, gamma 1	0.012
Hsp90ab1	heat shock protein 90 alpha (cytosolic), class B member 1	0.012
Brd3	bromodomain containing 3	0.012
Ankrd17	ankyrin repeat domain 17	0.012
Tcof1	Treacher Collins Franceschetti syndrome 1, homolog	0.011
Kdm4b	lysine (K)-specific demethylase 4B	0.011
Sall1	sal-like 1 (Drosophila)	0.011
Asf1b	ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	0.011
Ncdn	neurochondrin	0.011
Hells	helicase, lymphoid specific	0.011
Taf15	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	0.011
E2f1	E2F transcription factor 1	0.011
Ttk	Ttk protein kinase	0.011
Pik3r1	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	0.010
Mis18bp1	MIS18 binding protein 1	0.010
Larp1	La ribonucleoprotein domain family, member 1	0.010
Axin1	axin 1	0.010
Jarid2	jumonji, AT rich interactive domain 2	0.010
Hes3	hairy and enhancer of split 3 (Drosophila)	0.010
Ptges3	prostaglandin E synthase 3 (cytosolic)	0.010
Hist1h1a	histone cluster 1, H1a	0.010	Mouse
Atp11c	ATPase, class VI, type 11C	0.010
Rev3l	REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)	0.010
Pogz	pogo transposable element with ZNF domain	0.010