IMP: Integrative Multi-species Prediction

Rattus norvegicus

26 genes annotated in rat

Multi-species View

regulation of muscle organ development

GO:0048634

Any process that modulates the frequency, rate or extent of muscle development.

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Known genes in the process in ratInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "regulation of muscle organ development"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "regulation of muscle organ development" (in gray)

Name	Description	Probability	Func Analog Organism
Cd9	CD9 molecule	0.233
Ccl2	chemokine (C-C motif) ligand 2	0.164
S100a9	S100 calcium binding protein A9	0.150	Rat
Anxa2	annexin A2	0.132
S100a6	S100 calcium binding protein A6	0.111	Rat
S100a8	S100 calcium binding protein A8	0.098	Rat
Insig1	insulin induced gene 1	0.089
S100a10	S100 calcium binding protein A10	0.089	Rat
Vim	vimentin	0.071
Hmgcs1	3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble)	0.069
Idi1	isopentenyl-diphosphate delta isomerase 1	0.068
Prrx1	paired related homeobox 1	0.062
Anxa1	annexin A1	0.057
Sqle	squalene epoxidase	0.056
Cdkn3	cyclin-dependent kinase inhibitor 3	0.053
Sc4mol	sterol-C4-methyl oxidase-like	0.052
Tnni1	troponin I type 1 (skeletal, slow)	0.052
Mmp9	matrix metallopeptidase 9	0.051
Cyp51	cytochrome P450, family 51	0.051
Musk	muscle, skeletal, receptor tyrosine kinase	0.049
Phkg1	phosphorylase kinase, gamma 1	0.046
Syt8	synaptotagmin VIII	0.046
Fgf5	fibroblast growth factor 5	0.043	Rat
Bdkrb2	bradykinin receptor B2	0.043
Ccl4	chemokine (C-C motif) ligand 4	0.040
Cxcl2	chemokine (C-X-C motif) ligand 2	0.036
Lgals3	lectin, galactoside-binding, soluble, 3	0.036
Ncan	neurocan	0.035
RGD1309036	hypothetical LOC292874	0.034
LOC100362824	caveolin 2-like	0.033
Anxa5	annexin A5	0.032
Akt1	v-akt murine thymoma viral oncogene homolog 1	0.032
Kcnj10	potassium inwardly-rectifying channel, subfamily J, member 10	0.031
Camkk2	calcium/calmodulin-dependent protein kinase kinase 2, beta	0.030
Id1	inhibitor of DNA binding 1	0.030
Arhgap23	Rho GTPase activating protein 23	0.030
Fgfr2	fibroblast growth factor receptor 2	0.029	Mouse
Smad3	SMAD family member 3	0.029	Mouse
Gnb2	guanine nucleotide binding protein (G protein), beta polypeptide 2	0.029
Nos3	nitric oxide synthase 3, endothelial cell	0.028
Prlh	prolactin releasing hormone	0.028
Tspo	translocator protein	0.028
Crybb2	crystallin, beta B2	0.027
Cdkn2b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	0.027
Pcdhgc3	protocadherin gamma subfamily C, 3	0.027
Cstb	cystatin B (stefin B)	0.027
Stat6	signal transducer and activator of transcription 6	0.026
Ppard	peroxisome proliferator-activated receptor delta	0.026
Olr1	oxidized low density lipoprotein (lectin-like) receptor 1	0.026
Il2ra	interleukin 2 receptor, alpha	0.025
Kitlg	KIT ligand	0.025
Otx1	orthodenticle homeobox 1	0.024
B4galt1	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	0.024
Tcfe2a	transcription factor E2a	0.023
A3galt2	alpha 1,3-galactosyltransferase 2	0.023
Irs1	insulin receptor substrate 1	0.023
Smad7	SMAD family member 7	0.023	Fly
Bcl2l11	BCL2-like 11 (apoptosis facilitator)	0.022
Crip	cysteine-rich intestinal protein	0.022
Gabrg1	gamma-aminobutyric acid (GABA) A receptor, gamma 1	0.022
Erbb4	v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	0.022	Mouse
Hrh1	histamine receptor H 1	0.022
Efna5	ephrin A5	0.021
Clcn1	chloride channel 1	0.021
Camk2a	calcium/calmodulin-dependent protein kinase II alpha	0.020
Sub1	SUB1 homolog (S. cerevisiae)	0.020
RGD1564664	similar to LOC387763 protein	0.020
Lim2	lens intrinsic membrane protein 2	0.019
Top2a	topoisomerase (DNA) II alpha	0.019
Fdft1	farnesyl diphosphate farnesyl transferase 1	0.019
Fgf7	fibroblast growth factor 7	0.019	Rat
Ttn	titin	0.019
Prkca	protein kinase C, alpha	0.019
Plp2	proteolipid protein 2 (colonic epithelium-enriched)	0.019
Nrg1	neuregulin 1	0.019	Human Mouse
Agtr1a	angiotensin II receptor, type 1a	0.019
Ube2c	ubiquitin-conjugating enzyme E2C	0.018
S100a4	S100 calcium-binding protein A4	0.018	Rat
Isl2	ISL LIM homeobox 2	0.018
Uts2r	urotensin 2 receptor	0.018
Foxi2	forkhead box I2	0.018
Lyn	v-yes-1 Yamaguchi sarcoma viral related oncogene homolog	0.018
Cnksr2	connector enhancer of kinase suppressor of Ras 2	0.017
Cyp11a1	cytochrome P450, family 11, subfamily a, polypeptide 1	0.017
Ptpn12	protein tyrosine phosphatase, non-receptor type 12	0.017
Acacb	acetyl-Coenzyme A carboxylase beta	0.017
Lgals1	lectin, galactoside-binding, soluble, 1	0.017
Tax1bp3	Tax1 (human T-cell leukemia virus type I) binding protein 3	0.017
Prss1	protease, serine, 1 (trypsin 1)	0.017
Tacr2	tachykinin receptor 2	0.017
Krt13	keratin 13	0.017
Npy1r	neuropeptide Y receptor Y1	0.016
Egr3	early growth response 3	0.016
Il13	interleukin 13	0.016
Oprm1	opioid receptor, mu 1	0.016
Timp1	TIMP metallopeptidase inhibitor 1	0.016
Mak	male germ cell-associated kinase	0.016
Adrb1	adrenergic, beta-1-, receptor	0.016
Slc1a3	solute carrier family 1 (glial high affinity glutamate transporter), member 3	0.016
Has2	hyaluronan synthase 2	0.016
Anxa4	annexin A4	0.016
Tnfrsf4	tumor necrosis factor receptor superfamily, member 4	0.016
Ece1	endothelin converting enzyme 1	0.016
Gjb4	gap junction protein, beta 4	0.016	Rat
Csf3	colony stimulating factor 3 (granulocyte)	0.016
Crybb3	crystallin, beta B3	0.016
Pdc	phosducin	0.016
Clstn3	calsyntenin 3	0.015
Cdh6	cadherin 6	0.015
Hand2	heart and neural crest derivatives expressed 2	0.015
Fam70b	family with sequence similarity 70, member B	0.015
Crhbp	corticotropin releasing hormone binding protein	0.015
Rrad	Ras-related associated with diabetes	0.015
Chrna1	cholinergic receptor, nicotinic, alpha 1 (muscle)	0.015
Sod3	superoxide dismutase 3, extracellular	0.015
Snrpb	small nuclear ribonucleoprotein polypeptides B and B1	0.015
Olr857	olfactory receptor 857	0.015
Hapln1	hyaluronan and proteoglycan link protein 1	0.015
Ptpn1	protein tyrosine phosphatase, non-receptor type 1	0.015
Twist2	twist homolog 2 (Drosophila)	0.015	Fly
Met	met proto-oncogene	0.015
Srd5a2	steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)	0.015
Mdga1	MAM domain containing glycosylphosphatidylinositol anchor 1	0.015
Chrnb3	cholinergic receptor, nicotinic, beta 3	0.015
Rxrg	retinoid X receptor gamma	0.015
Cdh17	cadherin 17	0.015
Clec11a	C-type lectin domain family 11, member a	0.015
Myf6	myogenic factor 6	0.015
Prl	prolactin	0.015
Strn	striatin, calmodulin binding protein	0.014
Pou6f1	POU class 6 homeobox 1	0.014
Myo1c	myosin IC	0.014
Creb1	cAMP responsive element binding protein 1	0.014
Cks2	CDC28 protein kinase regulatory subunit 2	0.014
Purb	purine rich element binding protein B	0.014
Wnt5a	wingless-type MMTV integration site family, member 5A	0.014
Kcnq2	potassium voltage-gated channel, KQT-like subfamily, member 2	0.014
Pmp22	peripheral myelin protein 22	0.014
Pftk1	PFTAIRE protein kinase 1	0.014
Kcnn1	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1	0.014
Igfbp5	insulin-like growth factor binding protein 5	0.014
Pate4	prostate and testis expressed 4	0.014
Bmp6	bone morphogenetic protein 6	0.014
Il10ra	interleukin 10 receptor, alpha	0.014
Dmd	dystrophin	0.014
Fitm1	fat storage-inducing transmembrane protein 1	0.013
Arnt2	aryl hydrocarbon receptor nuclear translocator 2	0.013
Tnfsf4	tumor necrosis factor (ligand) superfamily, member 4	0.013
Ccl20	chemokine (C-C motif) ligand 20	0.013
Sfrp4	secreted frizzled-related protein 4	0.013
Bmpr1a	bone morphogenetic protein receptor, type IA	0.013	Rat Fly
Fgf2	fibroblast growth factor 2	0.013
Gnai2	guanine nucleotide binding protein (G protein), alpha inhibiting 2	0.013
Slc2a3	solute carrier family 2 (facilitated glucose transporter), member 3	0.013
Psgb1	pregnancy-specific beta 1-glycoprotein	0.013
LOC100360986	mCG1035404-like	0.013
Olr837	olfactory receptor 837	0.013
Snapc2	small nuclear RNA activating complex, polypeptide 2	0.013
Cckbr	cholecystokinin B receptor	0.013
Herpud1	homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	0.013
Nfia	nuclear factor I/A	0.013
Rabac1	Rab acceptor 1 (prenylated)	0.013
Neurl2	neuralized homolog 2 (Drosophila)	0.013
Kl	Klotho	0.013
Selp	selectin P	0.013
Tpm4	tropomyosin 4	0.013
Pitx1	paired-like homeodomain 1	0.013
Cacna1s	calcium channel, voltage-dependent, L type, alpha 1S subunit	0.013
Lin7c	lin-7 homolog C (C. elegans)	0.013
Angpt2	angiopoietin 2	0.013
Notch2	Notch homolog 2 (Drosophila)	0.013
Syt6	synaptotagmin VI	0.013
Ltb4r2	leukotriene B4 receptor 2	0.013
Prl8a2	prolactin family 8, subfamily a, member 2	0.012
Homer3	homer homolog 3 (Drosophila)	0.012
Crygb	crystallin, gamma B	0.012
Mbp	myelin basic protein	0.012
Pde4d	phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila)	0.012
Il11	interleukin 11	0.012
Gad2	glutamate decarboxylase 2	0.012
Il9	interleukin 9	0.012
Atp6v1f	ATPase, H transporting, lysosomal V1 subunit F	0.012
Ptpn7	protein tyrosine phosphatase, non-receptor type 7	0.012
Ccl3	chemokine (C-C motif) ligand 3	0.012
Hes3	hairy and enhancer of split 3 (Drosophila)	0.012
Pfkfb3	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	0.012
Lynx1	Ly6/neurotoxin 1	0.012
Rap1b	RAP1B, member of RAS oncogene family	0.012
Fxyd1	FXYD domain-containing ion transport regulator 1	0.012
Shox2	short stature homeobox 2	0.012	Mouse
Myl1	myosin, light chain 1	0.012
Sult5a1	sulfotransferase family 5A, member 1	0.012
LOC56764	dnaj-like protein	0.012
Nek9	NIMA (never in mitosis gene a)- related kinase 9	0.012
Dock8	dedicator of cytokinesis 8	0.012
Col9a1	collagen, type IX, alpha 1	0.012
Klrb1c	killer cell lectin-like receptor subfamily B member 1C	0.012
Kcnj1	potassium inwardly-rectifying channel, subfamily J, member 1	0.012
Ahr	aryl hydrocarbon receptor	0.012
Sirpa	signal-regulatory protein alpha	0.012
Galr1	galanin receptor 1	0.012
Jak1	Janus kinase 1	0.012
RGD1563136	similar to Cystatin-related protein 2 precursor (Prostatic 22 kDa glycoprotein P22K15)	0.012
Gja4	gap junction protein, alpha 4	0.012	Rat
Fgf18	fibroblast growth factor 18	0.012
Ccnb1	cyclin B1	0.012
RGD1305627	hypothetical LOC314467	0.012
Tcam1	testicular cell adhesion molecule 1	0.011
Pdpn	podoplanin	0.011
Hoxc4	homeo box C4	0.011
Olr226	olfactory receptor 226	0.011
Abcb4	ATP-binding cassette, subfamily B (MDR/TAP), member 4	0.011
Rpa2	replication protein A2	0.011
Chrna6	cholinergic receptor, nicotinic, alpha 6	0.011
Vcan	versican	0.011
Scn5a	sodium channel, voltage-gated, type V, alpha subunit	0.011
Dusp7	dual specificity phosphatase 7	0.011
Cmklr1	chemokine-like receptor 1	0.011
F2rl1	coagulation factor II (thrombin) receptor-like 1	0.011
RGD1565859	RGD1565859	0.011
Nfe2l2	nuclear factor, erythroid derived 2, like 2	0.011
Mmp10	matrix metallopeptidase 10	0.011
Np4	defensin NP-4 precursor	0.011
S1pr2	sphingosine-1-phosphate receptor 2	0.011
Bcl2l2	Bcl2-like 2	0.011
Cdk1	cyclin-dependent kinase 1	0.011
Tub	tubby homolog (mouse)	0.011
Ptma	prothymosin alpha	0.011
Kcnv2	potassium channel, subfamily V, member 2	0.011
Usf2	upstream transcription factor 2, c-fos interacting	0.011
Gja3	gap junction protein, alpha 3	0.011	Rat
Tgfb2	transforming growth factor, beta 2	0.011	Rat
Atp2b4	ATPase, Ca++ transporting, plasma membrane 4	0.011
Gfi1	growth factor independent 1 transcription repressor	0.011
Tagln2	transgelin 2	0.011
Dnah9	dynein, axonemal, heavy polypeptide 9	0.011
Tat	tyrosine aminotransferase	0.011
Syt9	synaptotagmin IX	0.011
Col5a3	collagen, type V, alpha 3	0.011
Myh3	myosin, heavy chain 3, skeletal muscle, embryonic	0.011
Gabra3	gamma-aminobutyric acid (GABA) A receptor, alpha 3	0.011
Ednrb	endothelin receptor type B	0.011
RGD1564327	similar to integrin alpha 8	0.011
Pex5l	peroxisomal biogenesis factor 5-like	0.011
Fgf10	fibroblast growth factor 10	0.011	Rat
Il6r	interleukin 6 receptor	0.011
Mef2d	myocyte enhancer factor 2D	0.010
Ncr1	natural cytotoxicity triggering receptor 1	0.010
Tnf	tumor necrosis factor (TNF superfamily, member 2)	0.010	Mouse
St8sia1	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	0.010
Grin2d	glutamate receptor, ionotropic, N-methyl D-aspartate 2D	0.010
Ubd	ubiquitin D	0.010
Cuzd1	CUB and zona pellucida-like domains 1	0.010
Mpp2	membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	0.010
Napa	N-ethylmaleimide-sensitive factor attachment protein, alpha	0.010
Pla2g1b	phospholipase A2, group IB, pancreas	0.010
Cx3cl1	chemokine (C-X3-C motif) ligand 1	0.010
Ntrk2	neurotrophic tyrosine kinase, receptor, type 2	0.010
Il6	interleukin 6	0.010
Il1rap	interleukin 1 receptor accessory protein	0.010
Sox11	SRY (sex determining region Y)-box 11	0.010
Foxd3	forkhead box D3	0.010
Cast	calpastatin	0.010
Foxc1	forkhead box C1	0.010
Pitx3	paired-like homeodomain 3	0.010
Stx2	syntaxin 2	0.010
Serpine2	serine (or cysteine) peptidase inhibitor, clade E, member 2	0.010
Sstr1	somatostatin receptor 1	0.010
Itpr2	inositol 1,4,5-triphosphate receptor, type 2	0.010