IMP: Integrative Multi-species Prediction

Rattus norvegicus

3 genes annotated in rat

sensory perception of light stimulus

The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.

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Known genes in the process in ratInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "sensory perception of light stimulus"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "sensory perception of light stimulus" (in gray)

Name	Description	Probability	Func Analog Organism
Gngt1	guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	0.051
Pfkfb2	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	0.036
Stip1	stress-induced phosphoprotein 1	0.034
Col3a1	collagen, type III, alpha 1	0.030
Dll3	delta-like 3 (Drosophila)	0.028
Grk1	G protein-coupled receptor kinase 1	0.027
Kcnb2	potassium voltage gated channel, Shab-related subfamily, member 2	0.027
Cartpt	CART prepropeptide	0.026
Prph2	peripherin 2	0.025
Impg2	interphotoreceptor matrix proteoglycan 2	0.025
Cryba4	crystallin, beta A4	0.024
Crybb1	crystallin, beta B1	0.023
Celsr3	cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)	0.022
RGD1565772	similar to hypothetical protein A430110N23	0.022
Onecut1	one cut homeobox 1	0.022
Sebox	SEBOX homeobox	0.022
Zfp37	zinc finger protein 37	0.022
Rho	rhodopsin	0.021	Mouse
Col1a2	collagen, type I, alpha 2	0.021
Zfp382	zinc finger protein 382	0.021
Mycs	myc-like oncogene, s-myc protein	0.021
Cldn19	claudin 19	0.021
Aipl1	aryl hydrocarbon receptor-interacting protein-like 1	0.021
Crygs	crystallin, gamma S	0.021
Gipr	gastric inhibitory polypeptide receptor	0.020
Vax1	ventral anterior homeobox 1	0.020
Grifin	galectin-related inter-fiber protein	0.020
Slc12a3	solute carrier family 12 (sodium/chloride transporters), member 3	0.020
Hsp90ab1	heat shock protein 90 alpha (cytosolic), class B member 1	0.020
Prm3	protamine 3	0.019
Pde1c	phosphodiesterase 1C	0.019
Synpo	synaptopodin	0.019
Il12b	interleukin 12B	0.019
Rgs8	regulator of G-protein signaling 8	0.019
Scn4a	sodium channel, voltage-gated, type IV, alpha subunit	0.019
Cryba2	crystallin, beta A2	0.019
Foxd3	forkhead box D3	0.018
Cnga1	cyclic nucleotide gated channel alpha 1	0.018
Tg	thyroglobulin	0.018
Ptf1a	pancreas specific transcription factor, 1a	0.017
Mef2d	myocyte enhancer factor 2D	0.017
Scnn1g	sodium channel, nonvoltage-gated 1, gamma	0.017
LOC100360165	rCG29588-like	0.017
Samsn1	SAM domain, SH3 domain and nuclear localization signals, 1	0.017
Crygd	crystallin, gamma D	0.017	Human
Crygc	crystallin, gamma C	0.017	Human
Lin28	lin-28 homolog (C. elegans)	0.017
Sag	S-antigen; retina and pineal gland (arrestin)	0.017	Rat
Cngb1	cyclic nucleotide gated channel beta 1	0.016	Human
Gjd2	gap junction protein, delta 2	0.016
Cryge	crystallin, gamma E	0.016	Human
Pdc	phosducin	0.016
Rgr	retinal G protein coupled receptor	0.016
Nr5a1	nuclear receptor subfamily 5, group A, member 1	0.016
Pax4	paired box 4	0.016
Akap1	A kinase (PRKA) anchor protein 1	0.016
Crx	cone-rod homeobox	0.016
Gabrr3	gamma-aminobutyric acid (GABA) receptor, rho 3	0.016
Nupl1	nucleoporin like 1	0.016
Amn	amnionless homolog (mouse)	0.016
Psmd4	proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	0.015
Rtbdn	retbindin	0.015
Pde6h	phosphodiesterase 6H, cGMP-specific, cone, gamma	0.015
Six6	SIX homeobox 6	0.015
Rgs9	regulator of G-protein signaling 9	0.015
Msh5	mutS homolog 5 (E. coli)	0.015
Myh6	myosin, heavy chain 6, cardiac muscle, alpha	0.015
Mybph	myosin binding protein H	0.015
Ly6g6e	lymphocyte antigen 6 complex, locus G6E	0.015
Htr1a	5-hydroxytryptamine (serotonin) receptor 1A	0.015
Espn	espin	0.015
Svop	SV2 related protein	0.015
Serpine3	serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3	0.014
Fbn1	fibrillin 1	0.014
Opn4	opsin 4	0.014
Hspb2	heat shock protein beta 2	0.014
Cacna1g	calcium channel, voltage-dependent, T type, alpha 1G subunit	0.014
Igsf9	immunoglobulin superfamily, member 9	0.014
Rcvrn	recoverin	0.014
Scn8a	sodium channel, voltage gated, type VIII, alpha subunit	0.014
Tnp2	transition protein 2	0.014
Npvf	neuropeptide VF precursor	0.014
Foxi2	forkhead box I2	0.014
Rarb	retinoic acid receptor, beta	0.014
Pgf	placental growth factor	0.014
Crtc3	CREB regulated transcription coactivator 3	0.014
Gucy2f	guanylate cyclase 2F	0.014
Hnrpm	heterogeneous nuclear ribonucleoprotein M	0.014
Accn4	amiloride-sensitive cation channel 4, pituitary	0.014
Mmel1	membrane metallo-endopeptidase-like 1	0.014
Dnah2	dynein, axonemal, heavy chain 2	0.013
RGD1308049	similar to RIKEN cDNA 2410004C24	0.013
Six3	SIX homeobox 3	0.013
Klc3	kinesin light chain 3	0.013
Drd2	dopamine receptor D2	0.013
Lmod1	leiomodin 1 (smooth muscle)	0.013
St8sia2	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	0.013
Hsd17b1	hydroxysteroid (17-beta) dehydrogenase 1	0.013
Ntrk1	neurotrophic tyrosine kinase, receptor, type 1	0.013
Shc2	SHC (Src homology 2 domain containing) transforming protein 2	0.013
Tbx2	T-box 2	0.013
Ppp5c	protein phosphatase 5, catalytic subunit	0.013
Cym	chymosin	0.013
Syt7	synaptotagmin VII	0.013
Ptges	prostaglandin E synthase	0.013
Rhobtb2	Rho-related BTB domain containing 2	0.013
Sctr	secretin receptor	0.013
Unc5a	unc-5 homolog A (C. elegans)	0.013
Bcl2l10	BCL2-like 10 (apoptosis facilitator)	0.013
Lim2	lens intrinsic membrane protein 2	0.013
Hmga2	high mobility group AT-hook 2	0.013
Fgf17	fibroblast growth factor 17	0.013
Xiap	X-linked inhibitor of apoptosis	0.013
Irx4	iroquois homeobox 4	0.013
Mgat3	mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	0.013
Glra3	glycine receptor, alpha 3	0.013
Chrm1	cholinergic receptor, muscarinic 1	0.013
Rab5b	RAB5B, member RAS oncogene family	0.013
Kcna6	potassium voltage gated channel, shaker related subfamily, member 6	0.013
Cacng3	calcium channel, voltage-dependent, gamma subunit 3	0.013
Flt4	fms-related tyrosine kinase 4	0.013
Bdkrb2	bradykinin receptor B2	0.013
Sfrs1	splicing factor, arginine/serine-rich 1	0.012
Tub	tubby homolog (mouse)	0.012
Htr7	5-hydroxytryptamine (serotonin) receptor 7	0.012
Klhl14	kelch-like 14 (Drosophila)	0.012
Hras	Harvey rat sarcoma virus oncogene	0.012
Fyn	FYN oncogene related to SRC, FGR, YES	0.012
Fgd4	FYVE, RhoGEF and PH domain containing 4	0.012
Enpp6	ectonucleotide pyrophosphatase/phosphodiesterase 6	0.012
Tulp1	tubby like protein 1	0.012	Human
Abcc8	ATP-binding cassette, subfamily C (CFTR/MRP), member 8	0.012
Cotl1	coactosin-like 1 (Dictyostelium)	0.012
Golga1	golgi autoantigen, golgin subfamily a, 1	0.012
Tsks	testis-specific serine kinase substrate	0.012
LOC683751	similar to trophinin isoform 1	0.012
Rims3	regulating synaptic membrane exocytosis 3	0.012
Tardbp	TAR DNA binding protein	0.012
Hcn3	hyperpolarization-activated cyclic nucleotide-gated potassium channel 3	0.012
Atp2c2	ATPase, Ca++ transporting, type 2C, member 2	0.012
Ugt1a7c	UDP glucuronosyltransferase 1 family, polypeptide A7C	0.012
Pla2g2c	phospholipase A2, group IIC	0.012
Hoxd3	homeo box D3	0.012
Epo	erythropoietin	0.012
Tshr	thyroid stimulating hormone receptor	0.012
Ecsit	ECSIT homolog (Drosophila)	0.012
Hes2	hairy and enhancer of split 2 (Drosophila)	0.012
Dag1	dystroglycan 1 (dystrophin-associated glycoprotein 1)	0.012
Acvr1b	activin A receptor, type IB	0.012
Znf532	zinc finger protein 532	0.012
Cyp17a1	cytochrome P450, family 17, subfamily a, polypeptide 1	0.012
Celsr2	cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)	0.012
Ppfia2	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	0.012
Cyp2b2	cytochrome P450, family 2, subfamily b, polypeptide 2	0.012
Crybb2	crystallin, beta B2	0.012
Fam126b	family with sequence similarity 126, member B	0.011
Hnrnpk	heterogeneous nuclear ribonucleoprotein K	0.011
Pspn	persephin	0.011
Isl1	ISL LIM homeobox 1	0.011
Col5a1	collagen, type V, alpha 1	0.011
Arhgef11	Rho guanine nucleotide exchange factor (GEF) 11	0.011
Doxl1	diamine oxidase-like protein 1	0.011
Grin2d	glutamate receptor, ionotropic, N-methyl D-aspartate 2D	0.011
Atp7b	ATPase, Cu++ transporting, beta polypeptide	0.011
Kcnj11	potassium inwardly rectifying channel, subfamily J, member 11	0.011
Pitx3	paired-like homeodomain 3	0.011
Pomc	proopiomelanocortin	0.011
Dnajb14	DnaJ (Hsp40) homolog, subfamily B, member 14	0.011
Radil	Ras association and DIL domains	0.011
Ngfr	nerve growth factor receptor (TNFR superfamily, member 16)	0.011
Pfkfb4	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	0.011
Gabbr2	gamma-aminobutyric acid (GABA) B receptor 2	0.011
Tat	tyrosine aminotransferase	0.011
Gzmf	granzyme F	0.011
Andpro	androgen regulated protein	0.011
Slc5a7	solute carrier family 5 (choline transporter), member 7	0.011
Vipr2	vasoactive intestinal peptide receptor 2	0.011
Kcnq2	potassium voltage-gated channel, KQT-like subfamily, member 2	0.011
Sumo2	SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)	0.011
Hcn2	hyperpolarization activated cyclic nucleotide-gated potassium channel 2	0.011
Pde6b	phosphodiesterase 6B, cGMP-specific, rod, beta	0.011
Eif2s3x	eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	0.011
Hnrnpl	heterogeneous nuclear ribonucleoprotein L	0.011
Sp3	Sp3 transcription factor	0.011
Cebpe	CCAAT/enhancer binding protein (C/EBP), epsilon	0.011
Dbh	dopamine beta-hydroxylase (dopamine beta-monooxygenase)	0.011
Slc8a3	solute carrier family 8 (sodium/calcium exchanger), member 3	0.011
Mapk3	mitogen activated protein kinase 3	0.011
Sdc3	syndecan 3	0.011
Col4a2	collagen, type IV, alpha 2	0.011
Gata6	GATA binding protein 6	0.011
Cdk5r2	cyclin-dependent kinase 5, regulatory subunit 2 (p39)	0.011
Ppp1r12a	protein phosphatase 1, regulatory (inhibitor) subunit 12A	0.011
Sparc	secreted protein, acidic, cysteine-rich (osteonectin)	0.011
Fezf2	Fez family zinc finger 2	0.011
LOC681335	hypothetical protein LOC681335	0.011
Gpsm1	G-protein signaling modulator 1 (AGS3-like, C. elegans)	0.011
Ugt1a5	UDP glucuronosyltransferase 1 family, polypeptide A5	0.011
Cryga	crystallin, gamma A	0.011
Ptpn5	protein tyrosine phosphatase, non-receptor type 5	0.011
Kcnh6	potassium voltage-gated channel, subfamily H (eag-related), member 6	0.011
Trpv4	transient receptor potential cation channel, subfamily V, member 4	0.011
Abca4	ATP-binding cassette, subfamily A (ABC1), member 4	0.011
Bglap	bone gamma-carboxyglutamate (gla) protein	0.011
Fgf4	fibroblast growth factor 4	0.011
Mecp2	methyl CpG binding protein 2	0.011
Abp10	annexin V-binding protein ABP-10	0.011
Dio3	deiodinase, iodothyronine, type III	0.011
Slc6a2	solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	0.011
Slc6a18	solute carrier family 6, member 18	0.011
Ss18l1	synovial sarcoma translocation gene on chromosome 18-like 1	0.011
Cel	carboxyl ester lipase	0.010
Arr3	arrestin 3, retinal (X-arrestin)	0.010
Naglt1	Na+ dependent glucose transporter 1	0.010
Lhx1	LIM homeobox 1	0.010
Nos1	nitric oxide synthase 1, neuronal	0.010
Slc1a2	solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.010
N5	DNA binding protein N5	0.010
Col2a1	collagen, type II, alpha 1	0.010	Human
Snph	syntaphilin	0.010
Tmem171	transmembrane protein 171	0.010
Hmgxb4	HMG box domain containing 4	0.010
Crybb3	crystallin, beta B3	0.010
Ngb	neuroglobin	0.010
Csnk1e	casein kinase 1, epsilon	0.010
Mllt6	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	0.010
Inpp4b	inositol polyphosphate-4-phosphatase, type II	0.010
Znf692	zinc finger protein 692	0.010
Ahr	aryl hydrocarbon receptor	0.010
Thbs1	thrombospondin 1	0.010
Gsbs	G substrate	0.010
Pde8b	phosphodiesterase 8B	0.010
LOC100359739	F-box and leucine-rich repeat protein 13-like	0.010
Dhh	desert hedgehog homolog (Drosophila)	0.010
Gipc3	GIPC PDZ domain containing family, member 3	0.010
Cadps	Ca++-dependent secretion activator	0.010
Lrrc50	leucine rich repeat containing 50	0.010
Miox	myo-inositol oxygenase	0.010
Trpv1	transient receptor potential cation channel, subfamily V, member 1	0.010
Pi4k2a	phosphatidylinositol 4-kinase type 2 alpha	0.010
Bace1	beta-site APP cleaving enzyme 1	0.010
Ttc9c	tetratricopeptide repeat domain 9C	0.010
Pam	peptidylglycine alpha-amidating monooxygenase	0.010
Cyp11b2	cytochrome P450, family 11, subfamily b, polypeptide 2	0.010
Bat3	HLA-B-associated transcript 3	0.010
Drp2	dystrophin related protein 2	0.010
Smarce1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.010
Chad	chondroadherin	0.010
Crhbp	corticotropin releasing hormone binding protein	0.010
Kif27	kinesin family member 27	0.010
RGD1560880	similar to RIKEN cDNA 2310002J15	0.010
Chrna4	cholinergic receptor, nicotinic, alpha 4	0.010
Shbg	sex hormone binding globulin	0.010
Opn1sw	opsin 1 (cone pigments), short-wave-sensitive	0.010