IMP: Integrative Multi-species Prediction

Rattus norvegicus

2 genes annotated in rat

rrna processing

Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.

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In addition to gene-name show these genes:

Known genes in the process in ratInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "rrna processing"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "rrna processing" (in gray)

Name	Description	Probability	Func Analog Organism
Rps12	ribosomal protein S12	0.128
Rpl31	ribosomal protein L31	0.114
Rps15	ribosomal protein S15	0.112
Rps28	ribosomal protein S28	0.070
Rpl11	ribosomal protein L11	0.065
Rpl23	ribosomal protein L23	0.061
Rpl37	ribosomal protein L37	0.060
Rpl4	ribosomal protein L4	0.058
Rpl18a	ribosomal protein L18A	0.057
Rpl8	ribosomal protein L8	0.056
Rpl21	ribosomal protein L21	0.055
Rpl13a	ribosomal protein L13A	0.053
Pno1	partner of NOB1 homolog (S. cerevisiae)	0.052
Sssca1	Sjogren's syndrome/scleroderma autoantigen 1 homolog (human)	0.051
LOC687711	similar to small nuclear ribonucleoprotein D3	0.049
LOC100362751	ribosomal protein P2-like	0.049
Rpl5	ribosomal protein L5	0.048
Rplp0	ribosomal protein, large, P0	0.045
Rpl23a	ribosomal protein L23a	0.043
Rps27a	ribosomal protein S27a	0.041	Yeast
Rps21	ribosomal protein S21	0.036
Mrps18b	mitochondrial ribosomal protein S18B	0.035
Rpl22	ribosomal protein L22	0.034
Rps26	ribosomal protein S26	0.034
Noc4l	nucleolar complex associated 4 homolog (S. cerevisiae)	0.033
Rps15a	ribosomal protein S15a	0.033
Rpl19	ribosomal protein L19	0.032
Rpl9	ribosomal protein L9	0.031
Rpl28	ribosomal protein L28	0.030
Ruvbl1	RuvB-like 1 (E. coli)	0.030
LOC100360491	60S ribosomal protein L13-like	0.029
Rps3	ribosomal protein S3	0.028
Rpl30	ribosomal protein L30	0.028
Rpl29	ribosomal protein L29	0.026
Rpl27a	ribosomal protein L27a	0.025
Bxdc2	brix domain containing 2	0.025
Rps23	ribosomal protein S23	0.025
Rps10	ribosomal protein S10	0.025
Rpsa	ribosomal protein SA	0.024
LOC100364212	heterogeneous nuclear ribonucleoprotein K-like	0.023
Eef1b2	eukaryotic translation elongation factor 1 beta 2	0.023
Rplp1	ribosomal protein, large, P1	0.022
Eif2b2	eukaryotic translation initiation factor 2B, subunit 2 beta	0.021
Rpl7a	ribosomal protein L7a	0.021
Rps25	ribosomal protein s25	0.021
LOC100360843	ribosomal protein S19-like	0.020
Rps4x	ribosomal protein S4, X-linked	0.020
Rpl34	ribosomal protein L34	0.019
Snrpf	small nuclear ribonucleoprotein polypeptide F	0.018
Rpl6	ribosomal protein L6	0.018
RGD1560212	similar to DNA segment, Chr 18, Wayne State University 98, expressed	0.018
Rpl38	ribosomal protein L38	0.017
Rpl17	ribosomal protein L17	0.017
Rpl3	ribosomal protein L3	0.017
Npm1	nucleophosmin (nucleolar phosphoprotein B23, numatrin)	0.017
Rpl36a	ribosomal protein L36a	0.016
Brp16	brain protein 16	0.016
Cct7	chaperonin containing Tcp1, subunit 7 (eta)	0.016
Pak1ip1	PAK1 interacting protein 1	0.015
Gnb2l1	guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	0.015
Snrpg	small nuclear ribonucleoprotein polypeptide G	0.015
Smn1	survival motor neuron 1	0.015
Rps8	ribosomal protein S8	0.014	Yeast
Rplp2	ribosomal protein, large P2	0.014
LOC679127	similar to Protein KIAA0690	0.014
Ubxn1	UBX domain protein 1	0.014
Hnrnpf	heterogeneous nuclear ribonucleoprotein F	0.014
Srm	spermidine synthase	0.013
Rpl26	ribosomal protein L26	0.013
Rpl22l1	ribosomal protein L22 like 1	0.013
Psme3	proteasome (prosome, macropain) activator subunit 3	0.013
Rps5	ribosomal protein S5	0.013
Rbm3	RNA binding motif (RNP1, RRM) protein 3	0.013
Uba52	ubiquitin A-52 residue ribosomal protein fusion product 1	0.013
Rps27	ribosomal protein S27	0.013	Yeast
Eif2b3	eukaryotic translation initiation factor 2B, subunit 3	0.013
Rps17	ribosomal protein S17	0.013
Fau	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	0.013
Hnrnpab	heterogeneous nuclear ribonucleoprotein A/B	0.012
Rps24	ribosomal protein S24	0.012	Yeast
Rps13	ribosomal protein S13	0.012
Spryd4	SPRY domain containing 4	0.012
Fastkd2	FAST kinase domains 2	0.012
Rps3a	ribosomal protein S3a	0.012
Nsun2	NOL1/NOP2/Sun domain family, member 2	0.012
LOC688637	similar to WD repeat domain 36	0.012
Polr2c	polymerase (RNA) II (DNA directed) polypeptide C	0.012
Rps19	ribosomal protein S19	0.012	Human
Bysl	bystin-like	0.011
Rps20	ribosomal protein S20	0.011
Grwd1	glutamate-rich WD repeat containing 1	0.011
Hnrnpk	heterogeneous nuclear ribonucleoprotein K	0.011
Znrd1	zinc ribbon domain containing, 1	0.011
Kpna1	karyopherin alpha 1	0.011
Rpl24	ribosomal protein L24	0.011
Umps	uridine monophosphate synthetase	0.011
Utp18	UTP18, small subunit (SSU) processome component, homolog (yeast)	0.011
Wdr12	WD repeat domain 12	0.011	Human
MGC112830	similar to transcription factor	0.011
Snrpd1	small nuclear ribonucleoprotein D1	0.010
Nolc1	nucleolar and coiled-body phosphoprotein 1	0.010
Tbl3	transducin (beta)-like 3	0.010	Yeast
Cs	citrate synthase	0.010
Rps2	ribosomal protein S2	0.010
Mrps34	mitochondrial ribosomal protein S34	0.010
Lsm5	LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.010