IMP: Integrative Multi-species Prediction

Danio rerio

1 genes annotated in zebrafish

spliceosomal complex assembly

The aggregation, arrangement and bonding together of a spliceosomal complex, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.

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Known genes in the process in zebrafishInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "spliceosomal complex assembly"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "spliceosomal complex assembly" (in gray)

Name	Description	Probability	Func Analog Organism
mbnl2	muscleblind-like 2 (Drosophila)	0.765
srsf2	serine/arginine-rich splicing factor 2	0.680
puf60b	poly-U binding splicing factor b	0.530	Fly
hnrnpab	heterogeneous nuclear ribonucleoprotein A/B	0.515
hnrnpk	heterogeneous nuclear ribonucleoprotein K	0.397
ewsr1a	Ewing sarcoma breakpoint region 1a	0.364
ilf3b	interleukin enhancer binding factor 3b	0.348
rbb4l	retinoblastoma binding protein 4, like	0.312
caprin1a	cell cycle associated protein 1a	0.256
sumo3a	SMT3 suppressor of mif two 3 homolog 3a	0.234
smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.213
rbm39a	RNA binding motif protein 39a	0.211
si:ch211-51e12.7	si:ch211-51e12.7	0.160
snrnp70	small nuclear ribonucleoprotein 70 (U1)	0.156
anp32a	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	0.149
setb	SET translocation (myeloid leukemia-associated) B	0.141
cpsf6	cleavage and polyadenylation specific factor 6	0.134
ck2b	casein kinase 2 beta	0.132
ssb	Sjogren syndrome antigen B (autoantigen La)	0.124
ddx39b	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39b	0.122
khdrbs1a	KH domain containing, RNA binding, signal transduction associated 1a	0.116
smc3	structural maintenance of chromosomes 3	0.111
zgc:77052	zgc:77052	0.110
dhx15	DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.107
srsf11	serine/arginine-rich splicing factor 11	0.106
hnrpl	heterogeneous nuclear ribonucleoprotein L	0.102
puf60a	poly-U binding splicing factor a	0.101	Fly
znf711	zinc finger protein 711	0.098
srsf6b	serine/arginine-rich splicing factor 6b	0.098	Human
zgc:56304	zgc:56304	0.092
tia1l	cytotoxic granule-associated RNA binding protein 1, like	0.089
srsf4	serine/arginine-rich splicing factor 4	0.085
ddx39aa	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa	0.085
ilf2	interleukin enhancer binding factor 2	0.083
zgc:110801	zgc:110801	0.083
hmga1a	high mobility group AT-hook 1a	0.081
sfrs3b	splicing factor, arginine/serine-rich 3b	0.079
rbmx	RNA binding motif protein, X-linked	0.078	Rat
eng1b	engrailed 1b	0.077
rnps1	RNA binding protein S1, serine-rich domain	0.073
h3f3c	H3 histone, family 3C	0.073
arpp19a	cAMP-regulated phosphoprotein 19a	0.065
nup107	nucleoporin 107	0.064
odc1	ornithine decarboxylase 1	0.063
hnrnpm	heterogeneous nuclear ribonucleoprotein M	0.062
ube2nb	ubiquitin-conjugating enzyme E2Nb	0.061
yes1	v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1	0.060
zgc:55876	zgc:55876	0.056
zgc:111944	zgc:111944	0.055
ppp2r1a	protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform	0.053
eftud2	elongation factor Tu GTP binding domain containing 2	0.053
ercc2	excision repair cross-complementing rodent repair deficiency, complementation group 2	0.053
nola1	nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs)	0.052
zgc:112425	zgc:112425	0.052
wu:fb58e05	wu:fb58e05	0.049
znf207a	zinc finger protein 207, a	0.047
safb	scaffold attachment factor B	0.044
nr2f2	nuclear receptor subfamily 2, group F, member 2	0.044
hnrnph1l	heterogeneous nuclear ribonucleoprotein H1, like	0.042
cand1	cullin-associated and neddylation-dissociated 1	0.041
nucks1a	nuclear casein kinase and cyclin-dependent kinase substrate 1a	0.041
rbm39b	RNA binding motif protein 39b	0.040
si:ch211-59d15.5	si:ch211-59d15.5	0.040
nrxn1a	neurexin 1a	0.040
anp32b	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	0.040
LOC100149834	cdc2-related kinase, arginine/serine-rich-like	0.039
nup93	nucleoporin 93	0.039
smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	0.039
tardbpl	TAR DNA binding protein, like	0.038
nup50	nucleoporin 50	0.038
hnrnpl2	heterogeneous nuclear ribonucleoprotein L2	0.037
tgif1	TGFB-induced factor homeobox 1	0.037
ube2i	ubiquitin-conjugating enzyme E2I	0.037
gpia	glucose phosphate isomerase a	0.037
pcdh2ac	protocadherin 2 alpha c	0.036
zgc:92194	zgc:92194	0.036
wtap	Wilms tumor 1 associated protein	0.036
srsf6a	serine/arginine-rich splicing factor 6a	0.036	Human
seta	SET translocation (myeloid leukemia-associated) A	0.036
zgc:136380	zgc:136380	0.035
ubtf	upstream binding transcription factor, RNA polymerase I	0.035
hnrpkl	heterogeneous nuclear ribonucleoprotein K, like	0.035
papolb	poly(A) polymerase beta (testis specific)	0.035
usp10	ubiquitin specific peptidase 10	0.034
thoc1	THO complex 1	0.034
sephs1	selenophosphate synthetase 1	0.033
znf207b	zinc finger protein 207, b	0.032
zgc:56148	zgc:56148	0.031
ctbp1	C-terminal binding protein 1	0.031
prrc1	proline-rich coiled-coil 1	0.030
smek1	SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.030
prpf39	PRP39 pre-mRNA processing factor 39 homolog (yeast)	0.030
ube2i2	ubiquitin-conjugating enzyme E2I2	0.030
qk	quaking	0.029
cul1a	cullin 1a	0.028
srsf1b	serine/arginine-rich splicing factor 1b	0.028	Human
pnn	pinin, desmosome associated protein	0.027
naa15a	N(alpha)-acetyltransferase 15, NatA auxiliary subunit a	0.027
polr2b	polymerase (RNA) II (DNA directed) polypeptide B	0.027
smek2	SMEK homolog 2, suppressor of mek1 (Dictyostelium)	0.027
ubin	ataxin-1 ubiquitin-like interacting protein	0.027
prmt5	protein arginine methyltransferase 5	0.027
zgc:110682	zgc:110682	0.026
pbx4	pre-B-cell leukemia transcription factor 4	0.026
aim1a	absent in melanoma 1a	0.026
zgc:110077	zgc:110077	0.025
sf3b1	splicing factor 3b, subunit 1	0.024
sema3aa	semaphorin 3aa	0.024
zgc:66382	zgc:66382	0.024
ttll1	tubulin tyrosine ligase-like family, member 1	0.024
elavl1	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	0.024
stac3	SH3 and cysteine rich domain 3	0.024
rnaset2l	ribonuclease T2, like	0.023
tada3l	transcriptional adaptor 3 (NGG1 homolog, yeast)-like	0.022
hnrnpa1	heterogeneous nuclear ribonucleoprotein A1	0.022
trnau1apl	tRNA selenocysteine 1 associated protein 1, like	0.022
smarce1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.022
lnx2a	ligand of numb-protein X 2a	0.022
myef2	myelin expression factor 2	0.021
gapdh	glyceraldehyde-3-phosphate dehydrogenase	0.021
nup133	nucleoporin 133	0.021
LOC100331798	histone H3.3-like	0.021
zgc:85716	zgc:85716	0.021
prpf38b	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	0.021
grem1a	gremlin 1 homolog a, cysteine knot superfamily (Xenopus laevis)	0.021
pomgnt1	protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	0.020
snrnp40	small nuclear ribonucleoprotein 40 (U5)	0.020
ilf3a	interleukin enhancer binding factor 3a	0.020
ctnnb1	catenin (cadherin-associated protein), beta 1	0.020
tra2b	transformer 2 beta homolog (Drosophila)	0.020
polb	polymerase (DNA directed), beta	0.019
aldh18a1	aldehyde dehydrogenase 18 family, member A1	0.019
sart3	squamous cell carcinoma antigen recognised by T cells 3	0.019
pomt2	protein-O-mannosyltransferase 2	0.019
prpf8	pre-mRNA processing factor 8	0.019	Yeast
ogt.2	O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 2	0.018
luc7l	LUC7-like (S. cerevisiae)	0.018	Yeast
khdrbs1b	KH domain containing, RNA binding, signal transduction associated 1b	0.018
ptger4a	prostaglandin E receptor 4 (subtype EP4) a	0.018
u2af2b	U2 small nuclear RNA auxiliary factor 2b	0.018
smu1	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	0.018
calm3b	calmodulin 3b (phosphorylase kinase, delta)	0.018
nhsl1b	NHS-like 1b	0.018
prp19	PRP19/PSO4 homolog (S. cerevisiae)	0.018	Human
dag1	dystroglycan 1	0.018
srsf1a	serine/arginine-rich splicing factor 1a	0.018	Human
LOC100330645	heterogeneous nuclear ribonucleoprotein U-like protein 1-like	0.018
smad5	MAD homolog 5 (Drosophila)	0.017
actr6	ARP6 actin-related protein 6 homolog (yeast)	0.017
gabpa	GA-binding protein transcription factor, alpha subunit	0.017
nup188	nucleoporin 188	0.017
rbm4.2	RNA binding motif protein 4.2	0.017
hug	HuG	0.017
eif1b	eukaryotic translation initiation factor 1B	0.017
cse1l	chromosome segregation 1-like (S. cerevisiae)	0.017
nup88	nucleoporin 88	0.017
rbm19	RNA binding motif protein 19	0.017
zgc:136773	zgc:136773	0.017
hdac1	histone deacetylase 1	0.017
kif5ba	kinesin family member 5B, a	0.017
zgc:86598	zgc:86598	0.017
srsf5b	serine/arginine-rich splicing factor 5b	0.017
sf1	splicing factor 1	0.016
nod2	nucleotide-binding oligomerization domain containing 2	0.016
psen1	presenilin 1	0.016
kdm5bb	lysine (K)-specific demethylase 5Bb	0.016
ing4	inhibitor of growth family, member 4	0.016
limk1	LIM domain kinase 1	0.016
pcf11	cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)	0.016
etf1	eukaryotic translation termination factor 1	0.016
spred1	sprouty-related, EVH1 domain containing 1	0.016
zgc:91926	zgc:91926	0.016
max	myc-associated factor X	0.016
snrpa	small nuclear ribonucleoprotein polypeptide A	0.016
sf3b4	splicing factor 3b, subunit 4	0.016
LOC796298	isotocin receptor-like 1	0.016
ankrd12	ankyrin repeat domain 12	0.016
hmgb2b	high-mobility group box 2b	0.016
pomt1	protein-O-mannosyltransferase 1	0.016
phf20b	PHD finger protein 20, b	0.015
cpsf2	cleavage and polyadenylation specific factor 2	0.015
ctnna	catenin (cadherin-associated protein), alpha	0.015
si:ch211-57k11.10	si:ch211-57k11.10	0.015
si:dkey-6e12.4	si:dkey-6e12.4	0.015
gtf2f1	general transcription factor IIF, polypeptide 1	0.015
celf1	cugbp, Elav-like family member 1	0.015	Mouse
eif4a2	eukaryotic translation initiation factor 4A, isoform 2	0.015
dlat	dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)	0.015
rap1a	RAP1A, member of RAS oncogene family	0.015
hnrpdl	heterogeneous nuclear ribonucleoprotein D-like	0.015
nolc1	nucleolar and coiled-body phosphoprotein 1	0.015
smarcb1a	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a	0.015
cnot1	CCR4-NOT transcription complex, subunit 1	0.015
sp4	sp4 transcription factor	0.014
bat1	HLA-B associated transcript 1	0.014	Human
prmt1	protein arginine methyltransferase 1	0.014
c20orf14	c20orf14 homolog (H. sapiens)	0.014
si:ch211-191d7.6	si:ch211-191d7.6	0.014
LOC100535373	hypothetical protein LOC100535373	0.014
zgc:103440	zgc:103440	0.014
lats1	LATS, large tumor suppressor, homolog 1 (Drosophila)	0.014
dbt	dihydrolipoamide branched chain transacylase E2	0.014
rpn1	ribophorin I	0.014
si:ch211-198a12.6	si:ch211-198a12.6	0.014
ccdc43	coiled-coil domain containing 43	0.014
yth2	YTH domain family 2	0.014
stip1	stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein)	0.014
lgals1l1	lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1	0.013
mycn	v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	0.013
xrn2	5'-3' exoribonuclease 2	0.013
atat1	alpha tubulin acetyltransferase 1	0.013
zgc:77155	zgc:77155	0.013
ppp4ca	protein phosphatase 4 (formerly X), catalytic subunit a	0.013
cbsa	cystathionine-beta-synthase a	0.013
pdlim3b	PDZ and LIM domain 3b	0.013
mettl16	methyltransferase like 16	0.013
ss18	synovial sarcoma translocation, chromosome 18 (H. sapiens)	0.013
wars	tryptophanyl-tRNA synthetase	0.013
huwe1	HECT, UBA and WWE domain containing 1	0.013
glceb	glucuronyl C5-epimerase b	0.013
map2k7	mitogen-activated protein kinase kinase 7	0.013
wu:fk48d07	wu:fk48d07	0.013
tardbp	TAR DNA binding protein	0.013
coro1b	coronin, actin binding protein, 1B	0.013
setd7	SET domain containing (lysine methyltransferase) 7	0.013
tmpoa	thymopoietin a	0.013
ppp2r5eb	protein phosphatase 2, regulatory subunit B', epsilon isoform b	0.013
hhatla	hedgehog acyltransferase-like, a	0.012
agk	acylglycerol kinase	0.012
zgc:100994	zgc:100994	0.012
supt6h	suppressor of Ty 6 homolog	0.012
zgc:171802	zgc:171802	0.012
hnrnpa0	heterogeneous nuclear ribonucleoprotein A0	0.012
wu:fc56f04	wu:fc56f04	0.012
eif4a1a	eukaryotic translation initiation factor 4A, isoform 1A	0.012
zgc:153059	zgc:153059	0.012
oaz2a	ornithine decarboxylase antizyme 2a	0.012
dopey1	dopey family member 1	0.012
slc25a3b	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b	0.012
nlgn4b	neuroligin 4b	0.012
mapk7	mitogen-activated protein kinase 7	0.012
dexi	dexamethasone-induced transcript	0.012
si:ch211-105d11.3	si:ch211-105d11.3	0.012
zdhhc16	zinc finger, DHHC domain containing 16	0.012
zgc:110577	zgc:110577	0.012
fubp1	far upstream element (FUSE) binding protein 1	0.012
eaf2	ELL associated factor 2	0.012
ccnb1	cyclin B1	0.012
zmat5	zinc finger, matrin type 5	0.012
si:ch211-253b1.6	si:ch211-253b1.6	0.012
nr2f6a	nuclear receptor subfamily 2, group F, member 6a	0.012
zgc:56706	zgc:56706	0.012
sf3a2	splicing factor 3a, subunit 2	0.012
glud1b	glutamate dehydrogenase 1b	0.012
map2k4b	mitogen-activated protein kinase kinase 4b	0.012
syncripl	synaptotagmin binding, cytoplasmic RNA interacting protein, like	0.012
api5	apoptosis inhibitor 5	0.012
srsf5a	serine/arginine-rich splicing factor 5a	0.012
zff9	zinc finger protein 9	0.011
ogt.1	O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 1	0.011
pcnt1	pericentrin 1	0.011
im:7137778	im:7137778	0.011
clgn	calmegin	0.011
zgc:92467	zgc:92467	0.011
lancl1	LanC antibiotic synthetase component C-like 1 (bacterial)	0.011
ctcf	CCCTC-binding factor (zinc finger protein)	0.011
aida	axin interaction partner and dorsalization antagonist	0.011
polr2a	polymerase (RNA) II (DNA directed) polypeptide A	0.011
si:ch73-37h15.2	si:ch73-37h15.2	0.011
hcfc1b	host cell factor C1b	0.011
ttc35	tetratricopeptide repeat domain 35	0.011
atf4b1	activating transcription factor 4b1 (tax-responsive enhancer element B67)	0.011
im:6903007	im:6903007	0.011
ppp1r10	protein phosphatase 1, regulatory subunit 10	0.011
comta	catechol-O-methyltransferase a	0.011
zgc:110753	zgc:110753	0.011
rp9	retinitis pigmentosa 9 (autosomal dominant)	0.011
zgc:92867	zgc:92867	0.011
si:ch1073-179p4.3	si:ch1073-179p4.3	0.011
pygma	phosphorylase, glycogen (muscle) A	0.011
si:ch211-173p18.1	si:ch211-173p18.1	0.011
yeats4	YEATS domain containing 4	0.011
rps6kal	ribosomal protein S6 kinase, like	0.011
snrpa1	small nuclear ribonucleoprotein polypeptide A'	0.011
mta2	metastasis associated 1 family, member 2	0.011
wu:fe14c11	wu:fe14c11	0.011
bactin1	bactin1	0.011
gabpb2a	GA repeat binding protein, beta 2a	0.011
ubtfl	upstream binding transcription factor, like	0.011
zgc:113068	zgc:113068	0.011
thoc4	THO complex 4	0.011
cherp	calcium homeostasis endoplasmic reticulum protein	0.011
zgc:152898	zgc:152898	0.011
atrx	alpha thalassemia/mental retardation syndrome X-linked homolog (human)	0.011
cstf1	cleavage stimulation factor, 3' pre-RNA, subunit 1	0.011
cbx8b	chromobox homolog 8b	0.011
si:ch211-79h18.3	si:ch211-79h18.3	0.011
prpf4b	PRP4 pre-mRNA processing factor 4 homolog B	0.011
naa40	N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	0.011
zgc:112403	zgc:112403	0.011
nprl2	nitrogen permease regulator-like 2 (S. cerevisiae)	0.011
dhps	deoxyhypusine synthase	0.011
acin1a	apoptotic chromatin condensation inducer 1a	0.011
rce1a	RCE1 homolog, prenyl protein peptidase (S. cerevisiae) a	0.011
med27	mediator complex subunit 27	0.011
im:7136021	im:7136021	0.011
ap2m1b	adaptor-related protein complex 2, mu 1 subunit, b	0.010
atp2b3a	ATPase, Ca++ transporting, plasma membrane 3a	0.010
im:7153078	im:7153078	0.010
wu:fb76c12	wu:fb76c12	0.010
zgc:123170	zgc:123170	0.010
ppp2r2d	protein phosphatase 2, regulatory subunit B, delta isoform	0.010
im:6904045	im:6904045	0.010
prmt7	protein arginine N-methyltransferase 7	0.010
mobkl1ab	MOB1, Mps One Binder kinase activator-like 1A (yeast), genome duplicate b	0.010
gpr85	G protein-coupled receptor 85	0.010
gab1	GRB2-associated binding protein 1	0.010
anp32e	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	0.010
il15l	interleukin 15, like	0.010
ncl1	nicalin	0.010
pcdh1a6	protocadherin 1 alpha 6	0.010
metap2	methionyl aminopeptidase 2	0.010
zgc:77262	zgc:77262	0.010
zgc:158363	zgc:158363	0.010
fastkd3	FAST kinase domains 3	0.010
zgc:77499	zgc:77499	0.010
tia1	cytotoxic granule-associated RNA binding protein 1	0.010
adar	adenosine deaminase, RNA-specific	0.010
gatad1	GATA zinc finger domain containing 1	0.010