IMP: Integrative Multi-species Prediction

Danio rerio

1 genes annotated in zebrafish

reciprocal dna recombination

A DNA recombination process that results in the equal exchange of genetic material between the recombining DNA molecules.

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Known genes in the process in zebrafishInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "reciprocal dna recombination"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "reciprocal dna recombination" (in gray)

Name	Description	Probability	Func Analog Organism
pafah1b1a	platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit a	0.578	Worm
pcna	proliferating cell nuclear antigen	0.390
pafah1b1b	platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit b	0.374	Worm
aplp2	amyloid beta (A4) precursor-like protein 2	0.187
mapk3	mitogen-activated protein kinase 3	0.174
chaf1b	chromatin assembly factor 1, subunit B	0.162
mcm4	MCM4 minichromosome maintenance deficient 4, mitotin (S. cerevisiae)	0.157
mcm5	MCM5 minichromosome maintenance deficient 5 (S. cerevisiae)	0.155	Fly
mybl2	myeloblastosis oncogene-like 2	0.134
foxi1	forkhead box I1	0.133
hells	helicase, lymphoid-specific	0.124
sass6	spindle assembly 6 homolog (C. elegans)	0.104
gpia	glucose phosphate isomerase a	0.100
ccnb1	cyclin B1	0.098
dnmt5	DNA (cytosine-5-)-methyltransferase 5	0.096
nfkbiab	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b	0.091
esco2	establishment of cohesion 1 homolog 2	0.084
hirip3	HIRA interacting protein 3	0.072
fgf8a	fibroblast growth factor 8 a	0.071
ptgs2a	prostaglandin-endoperoxide synthase 2a	0.069
slc2a10	solute carrier family 2 (facilitated glucose transporter), member 10	0.068
e2f5	E2F transcription factor 5	0.060
grnb	granulin b	0.059
piwil1	piwi-like 1 (Drosophila)	0.058
gro2	groucho 2	0.055
kif2c	kinesin family member 2C	0.054
pola1	polymerase (DNA directed), alpha 1	0.054
LOC554173	abnormal spindles	0.053
msh2	mutS homolog 2 (E. coli)	0.048
aurka	aurora kinase A	0.048
klf2a	Kruppel-like factor 2a	0.048
wdhd1	WD repeat and HMG-box DNA binding protein 1	0.045
brca2	breast cancer 2, early onset	0.045
si:ch211-1n9.7	si:ch211-1n9.7	0.045
mus81	MUS81 endonuclease homolog (yeast)	0.045
aldh1a2	aldehyde dehydrogenase 1 family, member A2	0.043
dnmt1	DNA (cytosine-5-)-methyltransferase 1	0.041
dnmt3	DNA (cytosine-5-)-methyltransferase 3	0.041
vasa	vasa homolog	0.041
chek1	CHK1 checkpoint homolog (S. pombe)	0.040
atp2b4	ATPase, Ca++ transporting, plasma membrane 4	0.038
kif23	kinesin family member 23	0.036
pold2	polymerase (DNA directed), delta 2, regulatory subunit	0.036
LOC797655	Bloom syndrome protein homolog	0.035
whsc1	Wolf-Hirschhorn syndrome candidate 1	0.035
ticrr	TopBP1-interacting, checkpoint, and replication regulator	0.035
zgc:91835	zgc:91835	0.035
foxo3a	forkhead box O3A	0.034
top2a	topoisomerase (DNA) II alpha	0.034
igf1rb	insulin-like growth factor 1b receptor	0.033
zbtb4	zinc finger and BTB domain containing 4	0.033
mych	myelocytomatosis oncogene homolog	0.033
plk4	polo-like kinase 4 (Drosophila)	0.032
si:ch211-215h6.2	si:ch211-215h6.2	0.032
alcamb	activated leukocyte cell adhesion molecule b	0.031
chek2	CHK2 checkpoint homolog (S. pombe)	0.031
zgc:113143	zgc:113143	0.031
zgc:100817	zgc:100817	0.030
per3	period homolog 3 (Drosophila)	0.029
emx3	empty spiracles homeobox 3	0.029
fancl	Fanconi anemia, complementation group L	0.029
nuf2	NUF2, NDC80 kinetochore complex component, homolog	0.029
sephs1	selenophosphate synthetase 1	0.028
dnmt7	DNA (cytosine-5-)-methyltransferase 7	0.028
dhfr	dihydrofolate reductase	0.028
gria2b	glutamate receptor, ionotropic, AMPA 2b	0.028
pola2	polymerase (DNA directed), alpha 2	0.027
dusp1	dual specificity phosphatase 1	0.027
eomesa	eomesodermin homolog a	0.027
dag1	dystroglycan 1	0.027
adipor2	adiponectin receptor 2	0.026
zgc:112054	zgc:112054	0.026
her9	hairy-related 9	0.026
ahi1	Abelson helper integration site 1	0.026
gins2	GINS complex subunit 2	0.025
cdh1	cadherin 1, epithelial	0.025
hormad1	HORMA domain containing 1	0.025
abcb3l1	ATP-binding cassette, sub-family B (MDR/TAP), member 3 like 1	0.025
satb2	SATB homeobox 2	0.025
nusap1	nucleolar and spindle associated protein 1	0.025
si:dkey-57a22.11	si:dkey-57a22.11	0.025
gdf11	growth differentiation factor 11	0.024
or111-10	odorant receptor, family D, subfamily 111, member 10	0.024
ttk	ttk protein kinase	0.024
dmrt3a	doublesex and mab-3 related transcription factor 3a	0.024
pinx1	pin2/trf1-interacting protein 1	0.024
pbx4	pre-B-cell leukemia transcription factor 4	0.024
ung	uracil-DNA glycosylase	0.024
myca	myelocytomatosis oncogene a	0.023
prim1	primase polypeptide 1	0.023
LOC566020	Gig2-like protein DreO	0.023
rif1	RAP1 interacting factor homolog (yeast)	0.023
cbx2	chromobox homolog 2 (Drosophila Pc class)	0.022
zgc:92851	zgc:92851	0.022
e2f4	E2F transcription factor 4	0.022
gria2a	glutamate receptor, ionotropic, AMPA 2a	0.022
psen1	presenilin 1	0.022
mettl3	methyltransferase like 3	0.022
aurkb	aurora kinase B	0.021
palb2	partner and localizer of BRCA2	0.021
ptenb	phosphatase and tensin homolog B (mutated in multiple advanced cancers 1)	0.021
rac1	ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	0.021
egr1	early growth response 1	0.021
kcnh2	potassium voltage-gated channel, subfamily H (eag-related), member 2	0.021
mapk14a	mitogen-activated protein kinase 14a	0.021
ncapg	non-SMC condensin I complex, subunit G	0.020
rrm2b	ribonucleotide reductase M2 b	0.020
LOC567131	calcitonin gene-related peptide type 1 receptor-like	0.020
e2f7	E2F transcription factor 7	0.020
brip1	BRCA1 interacting protein C-terminal helicase 1	0.020
st8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	0.020
trh1	trh1 protein	0.020
LOC100000332	e3 ubiquitin-protein ligase RNF182-like	0.020
cdc45	CDC45 cell division cycle 45 homolog (S. cerevisiae)	0.020
mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)	0.020
si:ch211-69g19.2	si:ch211-69g19.2	0.020
ptpra	protein tyrosine phosphatase, receptor type, A	0.020
msh6	mutS homolog 6 (E. coli)	0.020
rhoab	ras homolog gene family, member Ab	0.020
zgc:77165	zgc:77165	0.020
stil	TAL1 (SCL) interrupting locus	0.020
gmnn	geminin, DNA replication inhibitor	0.020
ripk2	receptor-interacting serine-threonine kinase 2	0.020
sdpra	serum deprivation response a	0.019
cpsf1	cleavage and polyadenylation specific factor 1	0.019
nedd1	neural precursor cell expressed, developmentally down-regulated 1	0.019
eme1	essential meiotic endonuclease 1 homolog 1 (S. pombe)	0.019
ar	androgen receptor	0.019
bactin1	bactin1	0.018
nup107	nucleoporin 107	0.018
polb	polymerase (DNA directed), beta	0.018
melk	maternal embryonic leucine zipper kinase	0.018
slbp	stem-loop binding protein	0.018
cep70	centrosomal protein 70	0.018
extl3	exostoses (multiple)-like 3	0.018
rfc1	replication factor C (activator 1) 1	0.018
etaa1	Ewing tumor-associated antigen 1	0.018
ube2cbp	ubiquitin-conjugating enzyme E2C binding protein	0.018
pigu	phosphatidylinositol glycan anchor biosynthesis, class U	0.018
rad51ap1	RAD51 associated protein 1	0.018
zgc:153369	zgc:153369	0.017
btg2	B-cell translocation gene 2	0.017
mcm7	MCM7 minichromosome maintenance deficient 7 (S. cerevisiae)	0.017
zgc:123296	zgc:123296	0.017
pold1	polymerase (DNA directed), delta 1, catalytic subunit	0.017
cdk2	cyclin-dependent kinase 2	0.017
wtap	Wilms tumor 1 associated protein	0.017
trip13	thyroid hormone receptor interactor 13	0.017	Mouse
actr8	ARP8 actin-related protein 8 homolog (yeast)	0.017
cmyb	transcription factor cmyb	0.017
rps6ka3a	ribosomal protein S6 kinase, polypeptide 3a	0.017
rpa1	replication protein A1	0.017	Yeast
ptprfb	protein tyrosine phosphatase, receptor type, f, b	0.016
tacc3	transforming, acidic coiled-coil containing protein 3	0.016
LOC100537814	kinetochore-associated protein 1-like	0.016
lrwd1	leucine-rich repeats and WD repeat domain containing 1	0.016
brpf1	bromodomain and PHD finger containing, 1	0.016
slc10a2	solute carrier family 10 (sodium/bile acid cotransporter family), member 2	0.016
krt5	keratin 5	0.016
trpv6	transient receptor potential cation channel, subfamily V, member 6	0.016
asf1bb	ASF1 anti-silencing function 1 homolog Bb	0.016
plekha1	pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	0.016
rbb4	retinoblastoma binding protein 4	0.016
LOC100150924	DNA polymerase subunit gamma-1-like	0.015
rp2	retinitis pigmentosa 2 (X-linked recessive)	0.015
card9	caspase recruitment domain family, member 9	0.015
rad51	RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae)	0.015
nkx2.3	NK2 transcription factor related 3	0.015
gnaia	guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a	0.015
tubgcp2	tubulin, gamma complex associated protein 2	0.015
trpv4	transient receptor potential cation channel, subfamily V, member 4	0.015
LOC100535638	hypothetical protein LOC100535638	0.015
gnao1a	guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a	0.015
csrnp1a	cysteine-serine-rich nuclear protein 1a	0.015
tgif1	TGFB-induced factor homeobox 1	0.015
ahctf1	AT hook containing transcription factor 1	0.015
sox9a	SRY-box containing gene 9a	0.015
ap1g1	adaptor-related protein complex 1, gamma 1 subunit	0.015
sart3	squamous cell carcinoma antigen recognised by T cells 3	0.015
zgc:152778	zgc:152778	0.015
hsd17b12a	hydroxysteroid (17-beta) dehydrogenase 12a	0.015
tfap2c	transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)	0.015
rmi1	RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)	0.014
stk36	serine/threonine kinase 36 (fused homolog, Drosophila)	0.014
adra2a	adrenergic, alpha-2A-, receptor	0.014
smad5	MAD homolog 5 (Drosophila)	0.014
tmem11	transmembrane protein 11	0.014
LOC100333229	PCNA-associated factor-like	0.014
yes1	v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1	0.014
ints8	integrator complex subunit 8	0.014
traip	TRAF-interacting protein	0.014
si:dkey-9k8.1	si:dkey-9k8.1	0.014
LOC100331484	hypothetical protein LOC100331484	0.014
si:ch211-235e18.3	si:ch211-235e18.3	0.014
map2k4a	mitogen-activated protein kinase kinase 4a	0.014
fkbp4	FK506 binding protein 4	0.014
irf6	interferon regulatory factor 6	0.014
zgc:92648	zgc:92648	0.014
epcam	epithelial cell adhesion molecule	0.014
dld	deltaD	0.014
tuba7l	tubulin, alpha 7 like	0.014
nrarpa	notch-regulated ankyrin repeat protein a	0.014
pld1a	phospholipase D1a	0.013
usp1	ubiquitin specific protease 1	0.013
zc3h10	zinc finger CCCH-type containing 10	0.013
htra1a	HtrA serine peptidase 1a	0.013
dclre1a	DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae)	0.013
zgc:114130	zgc:114130	0.013
arhgap11a	Rho GTPase activating protein 11A	0.013
foxa3	forkhead box A3	0.013
thraa	thyroid hormone receptor alpha a	0.013
zgc:153997	zgc:153997	0.013
tk2	thymidine kinase 2, mitochondrial	0.013
orc1	origin recognition complex, subunit 1	0.013
zgc:110687	zgc:110687	0.013
nar	no arches	0.013
gtf2h4	general transcription factor IIH, polypeptide 4	0.013
zgc:66100	zgc:66100	0.013
si:ch211-150a22.1	si:ch211-150a22.1	0.013
zgc:162965	zgc:162965	0.013
cxxc1	CXXC finger 1 (PHD domain)	0.013
tbx1	T-box 1	0.013
zgc:154089	zgc:154089	0.013
vtg1	vitellogenin 1	0.013
zgc:92360	zgc:92360	0.013
gro1	groucho 1	0.013
zgc:152925	zgc:152925	0.013
unc119.1	unc-119 homolog 1	0.013
pnx	posterior neuron-specific homeobox	0.013
cdc23	CDC23 (cell division cycle 23, yeast, homolog)	0.013
kpna2	karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	0.013
piwil2	piwi-like 2 (Drosophila)	0.013
cdc7	cell division cycle 7 homolog (S. cerevisiae)	0.012
zgc:174506	zgc:174506	0.012
odc1	ornithine decarboxylase 1	0.012
kif20bb	kinesin family member 20Bb	0.012
cdc20	cell division cycle 20 homolog	0.012
zgc:110113	zgc:110113	0.012
zgc:101661	zgc:101661	0.012
camk1d	calcium/calmodulin-dependent protein kinase 1D	0.012
rfc3	replication factor C (activator 1) 3	0.012
fen1	flap structure-specific endonuclease 1	0.012
rab12	RAB12, member RAS oncogene family	0.012
slc25a25a	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25a	0.012
krcp	kelch repeat-containing protein	0.012
socs3a	suppressor of cytokine signaling 3a	0.012
rb1	retinoblastoma 1	0.012
lsm7	LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.012
aggf1	angiogenic factor with G patch and FHA domains 1	0.012
ssrp1a	structure specific recognition protein 1a	0.012
si:ch211-156j22.4	si:ch211-156j22.4	0.012
tlcd1	TLC domain containing 1	0.012
racgap1	Rac GTPase-activating protein 1	0.011
elovl6l	ELOVL family member 6, elongation of long chain fatty acids like	0.011
rad54l	RAD54-like (S. cerevisiae)	0.011
wu:fb21f05	wu:fb21f05	0.011
pih1d1	PIH1 domain containing 1	0.011
kif15	kinesin family member 15	0.011
zgc:55521	zgc:55521	0.011
nkx2.5	NK2 transcription factor related 5	0.011
kif14	kinesin family member 14	0.011
foxm1	forkhead box M1	0.011
or102-1	odorant receptor, family C, subfamily 102, member 1	0.011
tuba1	tubulin, alpha 1	0.011
tfam	transcription factor A, mitochondrial	0.011
ppp2r5ea	protein phosphatase 2, regulatory subunit B', epsilon isoform a	0.011
cdca8	cell division cycle associated 8	0.011
si:ch211-173p18.9	si:ch211-173p18.9	0.011
prdm9	PR domain containing 9	0.011
waca	WW domain containing adaptor with coiled-coil a	0.011
ncapg2	non-SMC condensin II complex, subunit G2	0.011
ddc	dopa decarboxylase	0.011
ankrd12	ankyrin repeat domain 12	0.011
max	myc-associated factor X	0.011
cuedc2	CUE domain containing 2	0.011
cep55l	centrosomal protein 55 like	0.011
oip5	opa interacting protein 5	0.011
zgc:153921	zgc:153921	0.011
sec14l1	SEC14-like 1 (S. cerevisiae)	0.011
birc5a	baculoviral IAP repeat-containing 5a	0.011
or111-7	odorant receptor, family D, subfamily 111, member 7	0.011
buc	bucky ball	0.010
elk4	ELK4, ETS-domain protein	0.010
zgc:63691	zgc:63691	0.010
LOC100005938	hypothetical protein LOC100005938	0.010
si:dkey-179o14.3	si:dkey-179o14.3	0.010
zgc:56706	zgc:56706	0.010
zgc:64114	zgc:64114	0.010
zgc:158604	zgc:158604	0.010
chuk	conserved helix-loop-helix ubiquitous kinase	0.010
tmem115	transmembrane protein 115	0.010
ncapd3	non-SMC condensin II complex, subunit D3	0.010
zgc:153894	zgc:153894	0.010
cry3	cryptochrome 3	0.010
nlgn4a	neuroligin 4a	0.010
rab22a	RAB22A, member RAS oncogene family	0.010
wu:fa96e12	wu:fa96e12	0.010
pvrl1b	poliovirus receptor-related 1b	0.010
cast	calpastatin	0.010
fancd2	Fanconi anemia, complementation group D2	0.010