IMP: Integrative Multi-species Prediction

Danio rerio

2 genes annotated in zebrafish

Multi-species View

regulation of retina development in camera type eye

GO:1902866

Any process that modulates the frequency, rate or extent of retina development in camera-type eye.

Loading network...

In addition to gene-name show these genes:

Known genes in the process in zebrafishInclude functional analogs

Network Filters

Minimum relationship confidence:

Maximum number of genes:

Highlight known relationships in gold.

Graphical Options

Adjust edge length:

Adjust node size:

Fixed layout

Black background

Low confidence color:

Med confidence color:

High confidence color:

Hide the legend in the network

Save Options

Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "regulation of retina development in camera type eye"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "regulation of retina development in camera type eye" (in gray)

Name	Description	Probability	Func Analog Organism
mitfa	microphthalmia-associated transcription factor a	0.986
cdh5	cadherin 5	0.884
sox10	SRY-box containing gene 10	0.750
pax2a	paired box gene 2a	0.694	Fly
prdm1a	PR domain containing 1a, with ZNF domain	0.656
fgf8a	fibroblast growth factor 8 a	0.644
notch1a	notch homolog 1a	0.590
gch2	GTP cyclohydrolase 2	0.561
etv2	ets variant gene 2	0.557
gata1a	GATA binding protein 1a	0.528
tbx2b	T-box 2b	0.471
kita	kit receptor a	0.456	Zebrafish
flt4	fms-related tyrosine kinase 4	0.388	Zebrafish
si:ch73-60e21.1	si:ch73-60e21.1	0.380
gbx2	gastrulation brain homeo box 2	0.379
dll4	delta-like 4 (Drosophila)	0.375	Mouse
trpm7	transient receptor potential cation channel, subfamily M, member 7	0.370
neurog1	neurogenin 1	0.366
tie2	endothelium-specific receptor tyrosine kinase 2	0.365
foxi1	forkhead box I1	0.355
gdf6a	growth differentiation factor 6a	0.345
flt1	fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)	0.323	Zebrafish
lmx1b.1	LIM homeobox transcription factor 1, beta 1	0.322
dla	deltaA	0.302
runx1	runt-related transcription factor 1	0.283
kdr	kinase insert domain receptor (a type III receptor tyrosine kinase)	0.281	Zebrafish
si:ch211-235f6.2	si:ch211-235f6.2	0.280
cmyb	transcription factor cmyb	0.275
pnp4a	purine nucleoside phosphorylase 4a	0.274
tal1	T-cell acute lymphocytic leukemia 1	0.265
lrrc6	leucine rich repeat containing 6	0.255
foxj1b	forkhead box J1b	0.226
efnb2a	ephrin B2a	0.221
pax6b	paired box gene 6b	0.218
ift88	intraflagellar transport 88 homolog	0.218
cobl	cordon-bleu homolog (mouse)	0.214
cdh23	cadherin-like 23	0.209
tie1	endothelium-specific receptor tyrosine kinase 1	0.203
plxnd1	plexin D1	0.192
dyx1c1	dyslexia susceptibility 1 candidate 1	0.191
hhex	hematopoietically expressed homeobox	0.191
pax2b	paired box gene 2b	0.190	Fly
ins	preproinsulin	0.179
arhgef7b	Rho guanine nucleotide exchange factor (GEF) 7b	0.176
gata2a	GATA-binding protein 2a	0.173
dlc	deltaC	0.171
mib	mind bomb	0.169
irx7	iroquois homeobox protein 7	0.169
notch3	notch homolog 3	0.162
foxd3	forkhead box D3	0.159
hnf1ba	HNF1 homeobox Ba	0.148
cyp1a	cytochrome P450, family 1, subfamily A	0.146
cxcr4a	chemokine (C-X-C motif) receptor 4a	0.142
erg	v-ets erythroblastosis virus E26 oncogene like (avian)	0.140
jag2	jagged 2	0.136
sox7	SRY-box containing gene 7	0.134
atp1a1	ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.131
slc45a2	solute carrier family 45, member 2	0.129
hoxb3a	homeo box B3a	0.120
prox1	prospero-related homeobox gene 1	0.113	Fly
vegfc	vascular endothelial growth factor c	0.111
myo7aa	myosin VIIAa	0.111
vsg1	vessel-specific 1	0.110
hey2	hairy/enhancer-of-split related with YRPW motif 2	0.110
igfbp2a	insulin-like growth factor binding protein 2a	0.108
unc5b	unc-5 homolog B (C. elegans)	0.103
ptch2	patched 2	0.103
pou5f1	POU domain, class 5, transcription factor 1	0.095
dusp5	dual specificity phosphatase 5	0.095
aox3	aldehyde oxidase 3	0.090
eng2b	engrailed 2b	0.088
nkx2.7	NK2 transcription factor related 7	0.088
atoh1a	atonal homolog 1a	0.086
hoxb1a	homeo box B1a	0.086
fli1a	friend leukemia integration 1a	0.081
zgc:162329	zgc:162329	0.079
kif17	kinesin family member 17	0.076
tyr	tyrosinase	0.076
ccm2	cerebral cavernous malformation 2	0.074
atoh7	atonal homolog 7	0.070
fabp11a	fatty acid binding protein 11a	0.069
nkx2.2a	NK2 transcription factor related 2a	0.068
shha	sonic hedgehog a	0.068
ednrb1	endothelin receptor B	0.068
eng2a	engrailed 2a	0.063
crb2a	crumbs homolog 2a	0.062
six1b	sine oculis homeobox homolog 1b	0.061
rx3	retinal homeobox gene 3	0.060
tbx24	T-box 24	0.060
hoxb1b	homeo box B1b	0.056
ush1c	Usher syndrome 1C (autosomal recessive, severe)	0.056
pax8	paired box gene 8	0.055	Fly
edn1	endothelin 1	0.051
vegfaa	vascular endothelial growth factor Aa	0.051
birc2	baculoviral IAP repeat-containing 2	0.050
med12	mediator of RNA polymerase II transcription, subunit 12 homolog	0.049
hbbe3	hemoglobin beta embryonic-3	0.048
lrrc50	leucine rich repeat containing 50	0.048
esama	endothelial cell adhesion molecule a	0.048
csf1ra	colony stimulating factor 1 receptor, a	0.047
dlx3b	distal-less homeobox gene 3b	0.047
foxj1a	forkhead box J1a	0.047
bmp4	bone morphogenetic protein 4	0.046
nkx2.1a	NK2 homeobox 1a	0.045
sfrp5	secreted frizzled-related protein 5	0.044
ctbp2l	C-terminal binding protein 2, like	0.044
krit1	KRIT1, ankyrin repeat containing	0.042
dct	dopachrome tautomerase	0.041
hoxa3a	homeo box A3a	0.041
mpx	myeloid-specific peroxidase	0.041
nphs2	nephrosis 2, idiopathic, steroid-resistant (podocin)	0.040
nrarpb	notch-regulated ankyrin repeat protein b	0.040
wdr69	WD repeat domain 69	0.038
emilin1a	elastin microfibril interfacer 1a	0.038
ptpro	protein tyrosine phosphatase, receptor type, O	0.037
wdr16	WD repeat domain 16	0.037
ncam1b	neural cell adhesion molecule 1b	0.037
mc1r	melanocortin 1 receptor	0.037
dab2	disabled homolog 2 (Drosophila)	0.036
rorca	RAR-related orphan receptor C a	0.036
zgc:100838	zgc:100838	0.036
nme5	non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	0.035
vsx2	visual system homeobox 2	0.035
crabp2a	cellular retinoic acid binding protein 2, a	0.034
fmnl2a	formin-like 2a	0.034
lmx1b.2	LIM homeobox transcription factor 1, beta 2	0.033
flh	floating head	0.033
ntn4	netrin 4	0.033
raraa	retinoic acid receptor, alpha a	0.033
foxa1	forkhead box A1	0.033
cald1	caldesmon 1	0.032
hbbe1.1	hemoglobin beta embryonic-1.1	0.031
gfi1.1	growth factor independent 1.1	0.031
tbx16	T-box gene 16	0.031
mpp5a	membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5a)	0.029
nr2f2	nuclear receptor subfamily 2, group F, member 2	0.029
scn1bb	sodium channel, voltage-gated, type I, beta b	0.029
sc:d812	sc:d812	0.029
lhx3	LIM homeobox 3	0.029
efhc1	EF-hand domain (C-terminal) containing 1	0.028
pax6a	paired box gene 6a	0.028
neurod4	neurogenic differentiation 4	0.026
sp5l	Sp5 transcription factor-like	0.026
ikzf1	IKAROS family zinc finger 1 (Ikaros)	0.026
spi1	spleen focus forming virus (SFFV) proviral integration oncogene spi1	0.026
dlb	deltaB	0.025
spag6	sperm associated antigen 6	0.025
zgc:101797	zgc:101797	0.025
gpx1b	glutathione peroxidase 1b	0.025
tmie	transmembrane inner ear	0.025
gli1	GLI-Kruppel family member 1	0.025
pcsk5a	proprotein convertase subtilisin/kexin type 5a	0.025
isl1	islet1	0.024
prox1b	prospero-related homeobox gene 1b	0.024
atp6v1al	ATPase, H+ transporting, lysosomal V1 subunit A, like	0.024
ccdc151	coiled-coil domain containing 151	0.024
cyp26c1	cytochrome P450, family 26, subfamily C, polypeptide 1	0.023
pea3	ETS-domain transcription factor pea3	0.023
foxa2	forkhead box A2	0.023
slc17a8	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8	0.023
dmd	dystrophin	0.023
pcdh15a	protocadherin 15a	0.023
rbm24a	RNA binding motif protein 24a	0.022
ascl1a	achaete-scute complex-like 1a (Drosophila)	0.022
myl7	myosin, light polypeptide 7, regulatory	0.022
eya1	eyes absent homolog 1	0.022
barhl1.2	BarH-like 1.2	0.022
zgc:100919	zgc:100919	0.021
zgc:110784	zgc:110784	0.021
gfi1.2	growth factor independent 1.2	0.021
tfap2a	transcription factor AP-2 alpha	0.021
ltk	leukocyte tyrosine kinase	0.020
dkk2	dickkopf homolog 2 (Xenopus laevis)	0.020
zgc:162213	zgc:162213	0.020
mb	myoglobin	0.019
grhl2b	grainyhead-like 2b (Drosophila)	0.019
jag1b	jagged 1b	0.019
rtn4rl2b	reticulon 4 receptor-like 2b	0.019
olfm1b	olfactomedin 1b	0.019
smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.019
hoxb6a	homeo box B6a	0.019
bmp2b	bone morphogenetic protein 2b	0.019
ctsl1b	cathepsin L, 1 b	0.019
hoxa2b	homeo box A2b	0.019
zgc:112329	zgc:112329	0.018
cacna1da	calcium channel, voltage-dependent, L type, alpha 1D subunit, a	0.018
micall2a	mical-like 2a	0.018
ncs1a	neuronal calcium sensor 1a	0.018
ptf1a	pancreas specific transcription factor, 1a	0.018	Mouse
zgc:112030	zgc:112030	0.017
cav1	caveolin 1	0.017
sc:d0319	sc:d0319	0.017
pacrg	PARK2 co-regulated	0.017
slc2a11b	solute carrier family 2 (facilitated glucose transporter), member 11b	0.017
si:ch211-124e16.1	si:ch211-124e16.1	0.017
dbx1a	developing brain homeobox 1a	0.017
otpb	orthopedia homolog b	0.017
ca2	carbonic anhydrase II	0.017
aqp8a.1	aquaporin 8a, tandem duplicate 1	0.017
irx4b	iroquois homeobox protein 4b	0.017
cxcl12b	chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)	0.017
rasgrp3	RAS guanyl releasing protein 3 (calcium and DAG-regulated)	0.016
cdx4	caudal type homeo box transcription factor 4	0.016
lcp1	lymphocyte cytosolic plastin 1	0.016
igfbp7	insulin-like growth factor binding protein 7	0.016
capsla	calcyphosine-like a	0.016
lin28a	lin-28 homolog A (C. elegans)	0.016
sox9b	SRY-box containing gene 9b	0.016
pmela	premelanosome protein a	0.016
nhsl1a	NHS-like 1a	0.016
eng1a	engrailed 1a	0.016
synj1	synaptojanin 1	0.016
dzip1	DAZ interacting protein 1	0.016
pls1	plastin 1 (I isoform)	0.016
pax7b	paired box gene 7b	0.015
ndufb8	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8	0.015
hhip	hedgehog interacting protein	0.015
hoxd3a	homeo box D3a	0.015
elovl4b	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4b	0.015
atp6v0ca	ATPase, H+ transporting, lysosomal, V0 subunit c, a	0.015
cdh2	cadherin 2, neuronal	0.015
stab2	stabilin 2	0.015
ift172	intraflagellar transport 172	0.015
ndufb4	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4	0.015
si:ch211-212m21.5	si:ch211-212m21.5	0.015
prl	prolactin	0.015
kitlga	kit ligand a	0.015
notch1b	notch homolog 1b	0.014
arap3	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	0.014
tbx6	T-box gene 6	0.014
elmo1	engulfment and cell motility 1 (ced-12 homolog, C. elegans)	0.014
pnp6	purine nucleoside phosphorylase 6	0.014
rpl11	ribosomal protein L11	0.014
unc45a	unc-45 homolog A (C. elegans)	0.014
mafba	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)	0.014
cyfip2	cytoplasmic FMR1 interacting protein 2	0.014
mitfb	microphthalmia-associated transcription factor b	0.014
clrn1	clarin 1	0.014
sars	seryl-tRNA synthetase	0.014
wnt2bb	wingless-type MMTV integration site family, member 2Bb	0.014
osr1	odd-skipped related 1 (Drosophila)	0.014
paics	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase	0.014
atp2b1a	ATPase, Ca++ transporting, plasma membrane 1a	0.014
selp	selectin P	0.014
nkx2.5	NK2 transcription factor related 5	0.014
pou4f1	POU domain, class 4, transcription factor 1	0.014
calcrla	calcitonin receptor-like a	0.013
snai1b	snail homolog 1b (Drosophila)	0.013
irx4a	iroquois homeobox protein 4a	0.013
slc24a5	solute carrier family 24, member 5	0.013
chrna6	cholinergic receptor, nicotinic, alpha 6	0.013
esrra	estrogen-related receptor alpha	0.013
tekt2	tektin 2 (testicular)	0.013
atp5h	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d	0.013
her5	hairy-related 5	0.013
fgf3	fibroblast growth factor 3	0.013
msxc	muscle segment homeobox C	0.013
nr2e3	nuclear receptor subfamily 2, group E, member 3	0.013
six3b	sine oculis homeobox homolog 3b	0.013	Mouse
gpr98	G protein-coupled receptor 98	0.013
ndr2	nodal-related 2	0.013
ocrl	oculocerebrorenal syndrome of Lowe	0.013
lama1	laminin, alpha 1	0.013
ptprna	protein tyrosine phosphatase, receptor type, Na	0.013
cc2d2a	coiled-coil and C2 domain containing 2A	0.013
wnt1	wingless-type MMTV integration site family, member 1	0.012
boc	brother of CDO	0.012
crestin	crestin	0.012
atp1b2b	ATPase, Na+/K+ transporting, beta 2b polypeptide	0.012
prr15la	proline rich 15-like a	0.012
kdrl	kinase insert domain receptor like	0.012	Zebrafish
yrk	Yes-related kinase	0.012
mapk4	mitogen-activated protein kinase 4	0.012
wt1b	wilms tumor 1b	0.012
aldh1a3	aldehyde dehydrogenase 1 family, member A3	0.012
pitx3	paired-like homeodomain transcription factor 3	0.012
cyp46a2	cytochrome P450, family 46, subfamily A, polypeptide 2	0.012
pacsin3	protein kinase C and casein kinase substrate in neurons 3	0.012
sesn1	sestrin 1	0.012
epha7	eph receptor A7	0.012
si:ch211-173p18.9	si:ch211-173p18.9	0.012
foxe3	forkhead box E3	0.011
bnc2	basonuclin 2	0.011
foxi3a	forkhead box I3a	0.011
epb41l5	erythrocyte membrane protein band 4.1 like 5	0.011
fgf8b	fibroblast growth factor 8 b	0.011
LOC100003104	pleckstrin homology domain-containing family A member 8-like	0.011
aanat2	arylalkylamine N-acetyltransferase	0.011
chd	chordin	0.011
ccbe1	collagen and calcium binding EGF domains 1	0.011
igf1	insulin-like growth factor 1	0.011
zgc:110789	zgc:110789	0.011
efhc2	EF-hand domain (C-terminal) containing 2	0.011
atp6v1e1b	ATPase, H+ transporting, lysosomal, V1 subunit E isoform 1b	0.011
zte25	zebrafish testis-expressed 25	0.011
casz1	castor zinc finger 1	0.011
tmem88a	transmembrane protein 88 a	0.011
dbx1b	developing brain homeobox 1b	0.011
vhl	von Hippel-Lindau tumor suppressor	0.011
trim33	tripartite motif-containing 33	0.011
kcnj13	potassium inwardly-rectifying channel, subfamily J, member 13	0.010
pax5	paired box gene 5	0.010	Fly
nkx2.2b	NK2 transcription factor related 2b	0.010
hoxb8a	homeo box B8a	0.010
wu:fc46h12	wu:fc46h12	0.010
tcf7l1a	transcription factor 7-like 1a (T-cell specific, HMG-box)	0.010
phox2a	paired-like homeobox 2a	0.010
zgc:194876	zgc:194876	0.010
sox9a	SRY-box containing gene 9a	0.010
wu:fc25e04	wu:fc25e04	0.010
aldh1a2	aldehyde dehydrogenase 1 family, member A2	0.010
he1a	hatching enzyme 1a	0.010
ptgs1	prostaglandin-endoperoxide synthase 1	0.010
atp6v1f	ATPase, H+ transporting, V1 subunit F	0.010