IMP: Integrative Multi-species Prediction

Danio rerio

1 genes annotated in zebrafish

cellular response to dsrna

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.

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Known genes in the process in zebrafishInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "cellular response to dsrna"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "cellular response to dsrna" (in gray)

Name	Description	Probability	Func Analog Organism
setb	SET translocation (myeloid leukemia-associated) B	0.235
nop58	NOP58 ribonucleoprotein homolog (yeast)	0.232
prmt1	protein arginine methyltransferase 1	0.232
hnrnpa0	heterogeneous nuclear ribonucleoprotein A0	0.173
eif2c4	eukaryotic translation initiation factor 2C, 4	0.125
hnrnpab	heterogeneous nuclear ribonucleoprotein A/B	0.103
e2f5	E2F transcription factor 5	0.094
ncl	nucleolin	0.092
tardbp	TAR DNA binding protein	0.090
LOC570775	protein argonaute-1-like	0.088
khdrbs1b	KH domain containing, RNA binding, signal transduction associated 1b	0.087
khdrbs1a	KH domain containing, RNA binding, signal transduction associated 1a	0.072
srsf2	serine/arginine-rich splicing factor 2	0.063
zgc:112425	zgc:112425	0.060	Mouse
kcnh1	potassium voltage-gated channel, subfamily H (eag-related), member 1	0.059
ssb	Sjogren syndrome antigen B (autoantigen La)	0.058
eif4a1a	eukaryotic translation initiation factor 4A, isoform 1A	0.054
trim71	tripartite motif-containing 71	0.054
npm1	nucleophosmin 1	0.054	Human
LOC560606	novel protein similar to human and mouse leishmanolysin-like (metallopeptidase M8 family) (LMLN)	0.050
sfrs3b	splicing factor, arginine/serine-rich 3b	0.047
sb:eu275	sb:eu275	0.045
fancl	Fanconi anemia, complementation group L	0.042
adssl	adenylosuccinate synthase, like	0.041
hnrnpa0l	heterogeneous nuclear ribonucleoprotein A0, like	0.040
irf7	interferon regulatory factor 7	0.038
ddx39b	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39b	0.037
nhp2	NHP2 ribonucleoprotein homolog (yeast)	0.036
LOC561889	granulito	0.033
npm4	nucleophosmin/nucleoplasmin, 4	0.033	Human
xrn2	5'-3' exoribonuclease 2	0.032
zgc:77052	zgc:77052	0.028
LOC553505	hypothetical protein LOC553505	0.028
eif2c3	eukaryotic translation initiation factor 2C, 3	0.028	Fly
pkz	protein kinase containing Z-DNA binding domains	0.028
hmgb2a	high-mobility group box 2a	0.026
nanos3	nanos homolog 3	0.026
b2m	beta-2-microglobulin	0.026
rtf1	Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.025
slc39a11	solute carrier family 39 (metal ion transporter), member 11	0.025
puf60b	poly-U binding splicing factor b	0.025
lppr3b	lipid phosphate phosphatase-related protein type 3b	0.025
usp10	ubiquitin specific peptidase 10	0.024
wu:fk48d07	wu:fk48d07	0.024
prpf8	pre-mRNA processing factor 8	0.023
actn4	actinin, alpha 4	0.023
LOC402838	hypothetical protein LOC402838	0.023
syncripl	synaptotagmin binding, cytoplasmic RNA interacting protein, like	0.023
si:dkey-91i17.1	si:dkey-91i17.1	0.023
bms1l	BMS1-like, ribosome assembly protein (yeast)	0.022
irf9	interferon regulatory factor 9	0.022
sf1	splicing factor 1	0.022
sfpq	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)	0.022
rpe	ribulose-5-phosphate-3-epimerase	0.022
rcc2	regulator of chromosome condensation 2	0.022
polr2i	polymerase (RNA) II (DNA directed) polypeptide I	0.022
tardbpl	TAR DNA binding protein, like	0.021
gmps	guanine monphosphate synthetase	0.021
cxc46	CXC chemokine 46	0.021
zgc:56197	zgc:56197	0.020
slc39a1	solute carrier family 39 (zinc transporter), member 1	0.020
marcksa	myristoylated alanine rich protein kinase C substrate a	0.020
seta	SET translocation (myeloid leukemia-associated) A	0.020
ubtf	upstream binding transcription factor, RNA polymerase I	0.020
hnrnpl2	heterogeneous nuclear ribonucleoprotein L2	0.020
nolc1	nucleolar and coiled-body phosphoprotein 1	0.020
slc39a6	solute carrier family 39 (zinc transporter), member 6	0.019
wu:fb39a06	wu:fb39a06	0.019
smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	0.019
nfe2l2	nuclear factor (erythroid-derived 2)-like 2	0.019
zgc:77366	zgc:77366	0.019
senp3a	SUMO1/sentrin/SMT3 specific peptidase 3a	0.019
snrnp70	small nuclear ribonucleoprotein 70 (U1)	0.018
slc39a4	solute carrier family 39 (zinc transporter), member 4	0.018
fcer1gl	Fc receptor, IgE, high affinity I, gamma polypeptide like	0.018
pcsk1	proprotein convertase subtilisin/kexin type 1	0.017
ewsr1b	Ewing sarcoma breakpoint region 1b	0.017
elavl1	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	0.017
zgc:92126	zgc:92126	0.017
hnrnpm	heterogeneous nuclear ribonucleoprotein M	0.017
abl1	c-abl oncogene 1, non-receptor tyrosine kinase	0.016
stat1b	signal transducer and activator of transcription 1b	0.016
tomm40l	translocase of outer mitochondrial membrane 40 homolog, like	0.016
abcg2a	ATP-binding cassette, sub-family G (WHITE), member 2a	0.016
u2af2b	U2 small nuclear RNA auxiliary factor 2b	0.016
pl10	pl10	0.016
nrxn3a	neurexin 3a	0.015
b4galt6	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	0.015
alk	anaplastic lymphoma kinase (Ki-1)	0.015
hug	HuG	0.015
slc30a5	solute carrier family 30 (zinc transporter), member 5	0.015
eif4e1c	eukaryotic translation initiation factor 4E family member 1c	0.015
ranbp1	RAN binding protein 1	0.015
pbrm1l	polybromo 1, like	0.015
atrx	alpha thalassemia/mental retardation syndrome X-linked homolog (human)	0.015
ccdc40	coiled-coil domain containing 40	0.014
zorba	Orb/CPEB-related RNA-binding protein	0.014
ndst2a	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a	0.014
etf1	eukaryotic translation termination factor 1	0.014
cd247l	CD247 antigen like	0.014
zgc:172284	zgc:172284	0.014
glb1	galactosidase, beta 1	0.014
cyp19a1b	cytochrome P450, family 19, subfamily A, polypeptide 1b	0.014
slc43a1a	solute carrier family 43, member 1a	0.014
srsf11	serine/arginine-rich splicing factor 11	0.014
ssrp1a	structure specific recognition protein 1a	0.014
glod4	glyoxalase domain containing 4	0.014
ilf3a	interleukin enhancer binding factor 3a	0.013
api5	apoptosis inhibitor 5	0.013
psme2	proteasome activator subunit 2	0.013
inha	inhibin, alpha	0.013
celf1	cugbp, Elav-like family member 1	0.013
wu:fi04f09	wu:fi04f09	0.013
itfg2	integrin alpha FG-GAP repeat containing 2	0.013
zgc:109736	zgc:109736	0.013
ilf2	interleukin enhancer binding factor 2	0.013
zgc:110682	zgc:110682	0.013
cldn12	claudin 12	0.013
LOC566020	Gig2-like protein DreO	0.012
fbl	fibrillarin	0.012
fan1	FANCD2/FANCI-associated nuclease 1	0.012
pnp6	purine nucleoside phosphorylase 6	0.012
isg15	ISG15 ubiquitin-like modifier	0.012
wu:fa04h02	wu:fa04h02	0.012
vasa	vasa homolog	0.012
lycat	lysocardiolipin acyltransferase	0.012
slc8a4a	solute carrier family 8 (sodium/calcium exchanger), member 4a	0.012
nitr9	novel immune-type receptor 9	0.012
zgc:113210	zgc:113210	0.012
ppm1g	protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform	0.012
zgc:85716	zgc:85716	0.012
atpif1	ATPase inhibitory factor 1	0.012
LOC100007763	cholecystokinin-like	0.012
fpgs	folylpolyglutamate synthase	0.012
rbmx	RNA binding motif protein, X-linked	0.012
sc:d812	sc:d812	0.012
fcer1g	Fc receptor, IgE, high affinity I, gamma polypeptide	0.012
si:dkey-8l13.1	si:dkey-8l13.1	0.012
vtg6	vitellogenin 6	0.012
top1l	topoisomerase (DNA) I, like	0.012
dbr1	debranching enzyme homolog 1 (S. cerevisiae)	0.012
cdk7	cyclin-dependent kinase 7	0.012
kdm1a	lysine (K)-specific demethylase 1a	0.012
mtmr12	myotubularin related protein 12	0.011
atp2b4	ATPase, Ca++ transporting, plasma membrane 4	0.011
safb	scaffold attachment factor B	0.011
jak3	Janus kinase 3 (a protein tyrosine kinase, leukocyte)	0.011
mtm1	myotubularin 1	0.011
hmga1a	high mobility group AT-hook 1a	0.011
zgc:172101	zgc:172101	0.011
eftud2	elongation factor Tu GTP binding domain containing 2	0.011
si:dkey-108d22.4	si:dkey-108d22.4	0.011
atp2a2b	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2b	0.011
brca2	breast cancer 2, early onset	0.011
tpsn	tapasin	0.011
sumo3a	SMT3 suppressor of mif two 3 homolog 3a	0.011
zgc:158363	zgc:158363	0.011
psmb9a	proteasome (prosome, macropain) subunit, beta type, 9a	0.011
zgc:101761	zgc:101761	0.011
stat1a	signal transduction and activation of transcription 1a	0.011
med24	mediator complex subunit 24	0.011
eif3s10	eukaryotic translation initiation factor 3, subunit 10 (theta)	0.011
pop4	processing of precursor 4, ribonuclease P/MRP subunit	0.011
cldna	claudin a	0.011
ctps	CTP synthase	0.011
gbp1	guanylate binding protein 1	0.011
lsm14aa	LSM14 homolog Aa (SCD6, S. cerevisiae)	0.011
gmfg	glia maturation factor, gamma	0.011
ef1a	elongation factor 1-alpha	0.011
hsp90ab1	heat shock protein 90, alpha (cytosolic), class B member 1	0.011
rad54l	RAD54-like (S. cerevisiae)	0.011
nfe2l3	nuclear factor (erythroid-derived 2)-like 3	0.011
arid4a	AT rich interactive domain 4A (RBP1-like)	0.010
surf6	surfeit 6	0.010
fmr1	fragile X mental retardation 1	0.010
im:6907928	im:6907928	0.010
pho	phoenix	0.010
ppm1f	protein phosphatase 1F (PP2C domain containing)	0.010
LOC555739	serine/threonine-protein kinase LMTK1-like	0.010
slc30a6	solute carrier family 30 (zinc transporter), member 6	0.010
cx41.8	connexin 41.8	0.010
c20orf24	c20orf24 homolog (H. sapiens)	0.010
hnrnpk	heterogeneous nuclear ribonucleoprotein K	0.010
LOC100535786	transcription elongation regulator 1-like	0.010