IMP: Integrative Multi-species Prediction

Danio rerio

1 genes annotated in zebrafish

Multi-species View

mrna export from nucleus

GO:0006406

The directed movement of mRNA from the nucleus to the cytoplasm.

Loading network...

In addition to gene-name show these genes:

Known genes in the process in zebrafishInclude functional analogs

Network Filters

Minimum relationship confidence:

Maximum number of genes:

Highlight known relationships in gold.

Graphical Options

Adjust edge length:

Adjust node size:

Fixed layout

Black background

Low confidence color:

Med confidence color:

High confidence color:

Hide the legend in the network

Save Options

Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "mrna export from nucleus"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "mrna export from nucleus" (in gray)

Name	Description	Probability
snrnp40	small nuclear ribonucleoprotein 40 (U5)	0.177
zgc:77052	zgc:77052	0.099
prp19	PRP19/PSO4 homolog (S. cerevisiae)	0.081
cand1	cullin-associated and neddylation-dissociated 1	0.068
smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	0.067
rbm17	RNA binding motif protein 17	0.062
nup93	nucleoporin 93	0.061
tial1	TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.051
snrpb2	small nuclear ribonucleoprotein polypeptide B2	0.049
rps6kal	ribosomal protein S6 kinase, like	0.045
rfc4	replication factor C (activator 1) 4	0.044
pbx4	pre-B-cell leukemia transcription factor 4	0.042
dbr1	debranching enzyme homolog 1 (S. cerevisiae)	0.042
cpsf3	cleavage and polyadenylation specific factor 3	0.039
mib	mind bomb	0.038
nupl1	nucleoporin like 1	0.038
anapc5	anaphase promoting complex subunit 5	0.036
calm3b	calmodulin 3b (phosphorylase kinase, delta)	0.035
si:ch211-173p18.9	si:ch211-173p18.9	0.033
hug	HuG	0.033
nup50	nucleoporin 50	0.032
ssrp1a	structure specific recognition protein 1a	0.030
rbb4l	retinoblastoma binding protein 4, like	0.029
tsc22d2	TSC22 domain family 2 and TSC22 domain family, member 2	0.029
ahctf1	AT hook containing transcription factor 1	0.027
papolb	poly(A) polymerase beta (testis specific)	0.027
srsf4	serine/arginine-rich splicing factor 4	0.026
c20orf14	c20orf14 homolog (H. sapiens)	0.026
eftud2	elongation factor Tu GTP binding domain containing 2	0.025
xab2	XPA binding protein 2	0.025
si:ch211-59d15.5	si:ch211-59d15.5	0.025
h3f3c	H3 histone, family 3C	0.025
srsf6b	serine/arginine-rich splicing factor 6b	0.024
cpsf2	cleavage and polyadenylation specific factor 2	0.024
aaas	achalasia, adrenocortical insufficiency, alacrimia	0.024
rbm19	RNA binding motif protein 19	0.024
dhx37	DEAH (Asp-Glu-Ala-His) box polypeptide 37	0.024
arglu1a	arginine and glutamate rich 1a	0.023
med12	mediator of RNA polymerase II transcription, subunit 12 homolog	0.023
zgc:92139	zgc:92139	0.023
ppm1bb	protein phosphatase, Mg2+/Mn2+ dependent, 1Bb	0.023
snrpa	small nuclear ribonucleoprotein polypeptide A	0.022
dus1l	dihydrouridine synthase 1-like (S. cerevisiae)	0.022
hnrnpa0l	heterogeneous nuclear ribonucleoprotein A0, like	0.022
LOC100331798	histone H3.3-like	0.022
usp10	ubiquitin specific peptidase 10	0.021
ipo9	importin 9	0.021
rangap1	Ran GTPase activating protein 1	0.021
im:7141335	im:7141335	0.021
zgc:92006	zgc:92006	0.021
caprin1a	cell cycle associated protein 1a	0.020
sumo3a	SMT3 suppressor of mif two 3 homolog 3a	0.020
prpf8	pre-mRNA processing factor 8	0.020
srsf2	serine/arginine-rich splicing factor 2	0.019
clgn	calmegin	0.019
tia1l	cytotoxic granule-associated RNA binding protein 1, like	0.019
rhd	Rh blood group, D antigen	0.019
gtdc1	glycosyltransferase-like domain containing 1	0.019
anp32a	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	0.019
usp5	ubiquitin specific protease 5	0.018
ankrd13c	ankyrin repeat domain 13C	0.018
tuba8l4	tubulin, alpha 8 like 4	0.018
prkrir	protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	0.018
zgc:110717	zgc:110717	0.018
saal1	serum amyloid A-like 1	0.018
ddx20	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	0.018
ints9	integrator complex subunit 9	0.018
psmd1	proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.018
prmt7	protein arginine N-methyltransferase 7	0.018
sephs1	selenophosphate synthetase 1	0.018
nsun4	NOL1/NOP2/Sun domain family, member 4	0.018
psmd10	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10	0.017
im:7136185	im:7136185	0.017
rbm39a	RNA binding motif protein 39a	0.017
ep300b	E1A binding protein p300 b	0.017
bub3	BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast)	0.017
rfx1b	regulatory factor X, 1b (influences HLA class II expression)	0.017
qk	quaking	0.017
polr2gl	polymerase (RNA) II (DNA directed) polypeptide G-like	0.016
cnot1	CCR4-NOT transcription complex, subunit 1	0.016
usp4	ubiquitin specific protease 4 (proto-oncogene)	0.016
seh1l	SEH1-like (S. cerevisiae)	0.016
srsf11	serine/arginine-rich splicing factor 11	0.016
pcgf6	polycomb group ring finger 6	0.016
eed	embryonic ectoderm development	0.015
zgc:112982	zgc:112982	0.015
dhx16	DEAH (Asp-Glu-Ala-His) box polypeptide 16	0.015
pqbp1l	polyglutamine binding protein 1-like	0.015
ecd	ecdysoneless homolog (Drosophila)	0.015
tfdp1b	transcription factor Dp-1, b	0.015
gtf2h4	general transcription factor IIH, polypeptide 4	0.015
exosc9	exosome component 9	0.015
zgc:153290	zgc:153290	0.015
zc3h10	zinc finger CCCH-type containing 10	0.014
ctr9	Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.014
mre11a	meiotic recombination 11 homolog A (S. cerevisiae)	0.014
wdr18	WD repeat domain 18	0.014
im:7163548	im:7163548	0.014
eif4h	eukaryotic translation initiation factor 4h	0.014
api5	apoptosis inhibitor 5	0.014
rnaseh2a	ribonuclease H2, subunit A	0.014
stip1	stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein)	0.014
naa15a	N(alpha)-acetyltransferase 15, NatA auxiliary subunit a	0.014
paxip1	PAX interacting (with transcription-activation domain) protein 1	0.014
im:7150937	im:7150937	0.014
tia1	cytotoxic granule-associated RNA binding protein 1	0.014
cltca	clathrin, heavy polypeptide a (Hc)	0.013
zgc:113409	zgc:113409	0.013
poc1a	POC1 centriolar protein homolog A (Chlamydomonas)	0.013
thoc1	THO complex 1	0.013
skiv2l2	superkiller viralicidic activity 2-like 2	0.013
clk4a	CDC-like kinase 4a	0.013
arhgap12	Rho GTPase activating protein 12	0.013
snapc1b	small nuclear RNA activating complex, polypeptide 1b	0.013
tpp1	tripeptidyl peptidase I	0.013
zgc:56630	zgc:56630	0.013
gtf2f1	general transcription factor IIF, polypeptide 1	0.013
asna1	arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	0.013
zgc:112254	zgc:112254	0.013
ube2na	ubiquitin-conjugating enzyme E2Na	0.013
extl3	exostoses (multiple)-like 3	0.013
lppr3b	lipid phosphate phosphatase-related protein type 3b	0.013
prkci	protein kinase C, iota	0.013
tex10	testis expressed 10	0.013
b4galt6	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	0.013
psmd11a	proteasome (prosome, macropain) 216S subunit, non-ATPase, 11a	0.013
exosc8	exosome component 8	0.013
wdr24	WD repeat domain 24	0.012
wu:fd23d07	wu:fd23d07	0.012
LOC555648	hypothetical protein LOC555648	0.012
supt5h	suppressor of Ty 5 homolog (S. cerevisiae)	0.012
eif2d	eukaryotic translation initiation factor 2D	0.012
flr	fleer	0.012
plrg1	pleiotropic regulator 1	0.012
tnrc6b	trinucleotide repeat containing 6B	0.012
akap8l	A kinase (PRKA) anchor protein 8-like	0.012
zfr	zinc finger RNA binding protein	0.012
phf20b	PHD finger protein 20, b	0.012
ptbp2	polypyrimidine tract binding protein 2	0.012
hectd1	HECT domain containing 1	0.012
rbm4.2	RNA binding motif protein 4.2	0.012
cse1l	chromosome segregation 1-like (S. cerevisiae)	0.012
dmap1	DNA methyltransferase 1 associated protein 1	0.012
naa40	N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	0.012
tipin	timeless interacting protein	0.012
xrn2	5'-3' exoribonuclease 2	0.012
zgc:110753	zgc:110753	0.012
pcf11	cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)	0.012
zgc:110800	zgc:110800	0.012
wu:fe14c11	wu:fe14c11	0.012
parp1	poly (ADP-ribose) polymerase family, member 1	0.012
si:dkey-221j11.2	si:dkey-221j11.2	0.012
zgc:77304	zgc:77304	0.011
twistnb	TWIST neighbor	0.011
med18	mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)	0.011
alg8	asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)	0.011
rnps1	RNA binding protein S1, serine-rich domain	0.011
ctnnbl1	catenin, beta like 1	0.011
lrwd1	leucine-rich repeats and WD repeat domain containing 1	0.011
alg3	asparagine-linked glycosylation 3 homolog (S. cerevisiae, alpha-1,3-mannosyltransferase)	0.011
zgc:101800	zgc:101800	0.011
si:ch211-173p18.1	si:ch211-173p18.1	0.011
lin54	lin-54 homolog	0.011
sdf2	stromal cell-derived factor 2	0.011
supt7l	suppressor of Ty 7 (S. cerevisiae)-like	0.011
ccni	cyclin I	0.011
zc3h7a	zinc finger CCCH-type containing 7A	0.011
myst3	MYST histone acetyltransferase (monocytic leukemia) 3	0.011
LOC555279	hypothetical LOC555279	0.011
ran	ras-related nuclear protein	0.011
xrn1	5'-3' exoribonuclease 1	0.011
cpne3	copine III	0.011
slc10a4	solute carrier family 10 (sodium/bile acid cotransporter family), member 4	0.011
sfxn4	sideroflexin 4	0.011
rpp21	ribonuclease P 21 subunit	0.011
terfa	telomeric repeat binding factor a	0.011
zgc:103440	zgc:103440	0.011
zgc:63850	zgc:63850	0.011
mdn1	midasin homolog (yeast)	0.011
zdhhc16	zinc finger, DHHC domain containing 16	0.011
apc	adenomatosis polyposis coli	0.011
snrnp70	small nuclear ribonucleoprotein 70 (U1)	0.011
zgc:103670	zgc:103670	0.011
ubtf	upstream binding transcription factor, RNA polymerase I	0.011
zgc:101006	zgc:101006	0.011
thoc5	THO complex 5	0.011
zgc:66306	zgc:66306	0.011
trappc1	trafficking protein particle complex 1	0.011
rnf113a	ring finger protein 113A	0.011
zgc:86609	zgc:86609	0.011
hnrpkl	heterogeneous nuclear ribonucleoprotein K, like	0.011
zgc:113143	zgc:113143	0.011
spryd4	SPRY domain containing 4	0.011
aim1a	absent in melanoma 1a	0.011
tpd52l2b	tumor protein D52-like 2b	0.011
fastkd3	FAST kinase domains 3	0.011
zgc:112384	zgc:112384	0.010
si:ch211-207m11.1	si:ch211-207m11.1	0.010
cobra1	cofactor of BRCA1	0.010
rpap2	RNA polymerase II associated protein 2	0.010
zgc:100970	zgc:100970	0.010
zgc:112329	zgc:112329	0.010
spred1	sprouty-related, EVH1 domain containing 1	0.010
zgc:112403	zgc:112403	0.010
mrpl13	mitochondrial ribosomal protein L13	0.010
si:ch211-197h24.9	si:ch211-197h24.9	0.010
prodha	proline dehydrogenase (oxidase) 1a	0.010
snx27	sorting nexin family member 27	0.010
zgc:103568	zgc:103568	0.010
prep	prolyl endopeptidase	0.010
slc45a2	solute carrier family 45, member 2	0.010
uprt	uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)	0.010
hemk1	HemK methyltransferase family member 1	0.010
grb10a	growth factor receptor-bound protein 10a	0.010
hnrnpa1	heterogeneous nuclear ribonucleoprotein A1	0.010
im:7152756	im:7152756	0.010
golgb1	golgi autoantigen, golgin subfamily b, macrogolgin (with transmembrane signal), 1	0.010
sfswap	splicing factor, suppressor of white-apricot homolog (Drosophila)	0.010
si:dkey-165a24.4	si:dkey-165a24.4	0.010
dhps	deoxyhypusine synthase	0.010
zgc:112973	zgc:112973	0.010
acp1	acid phosphatase 1, soluble	0.010
wu:fb58h05	wu:fb58h05	0.010
th1l	TH1-like (Drosophila)	0.010
thyn1	thymocyte nuclear protein 1	0.010
sc5dl	sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.010
snrpa1	small nuclear ribonucleoprotein polypeptide A'	0.010
zgc:110577	zgc:110577	0.010
nfyc	nuclear transcription factor Y, gamma	0.010
maf1	MAF1 homolog (S. cerevisiae)	0.010
rp9	retinitis pigmentosa 9 (autosomal dominant)	0.010
baz1b	bromodomain adjacent to zinc finger domain, 1B	0.010
ddx42	DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	0.010
sae1	SUMO1 activating enzyme subunit 1	0.010