IMP: Integrative Multi-species Prediction

Danio rerio

11 genes annotated in zebrafish

ribonucleoside metabolic process

The chemical reactions and pathways involving any ribonucleoside, a nucleoside in which purine or pyrimidine base is linked to a ribose (beta-D-ribofuranose) molecule.

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Known genes in the process in zebrafishInclude functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "ribonucleoside metabolic process"

Show only novel predictionsShow only unknown genesHighlight genes with functional analogs involved in "ribonucleoside metabolic process" (in gray)

Name	Description	Probability	Func Analog Organism
plxnb2a	plexin b2a	0.134	Mouse
idh2	isocitrate dehydrogenase 2 (NADP+), mitochondrial	0.105
cacnb1	calcium channel, voltage-dependent, beta 1 subunit	0.105
sdha	succinate dehydrogenase complex, subunit A, flavoprotein (Fp)	0.103
ef1a	elongation factor 1-alpha	0.102	Worm
myhz1.1	myosin, heavy polypeptide 1.1, skeletal muscle	0.099	Fly
uqcrc2b	ubiquinol-cytochrome c reductase core protein IIb	0.067
hspd1	heat shock 60kD protein 1 (chaperonin)	0.064	Yeast
copeb	core promoter element binding protein	0.060
tnnc1b	troponin C type 1b (slow)	0.056
bida	BH3 interacting domain death agonist	0.052
zgc:111961	zgc:111961	0.050
hspa4a	heat shock protein 4a	0.048	Yeast
tnni1al	troponin I, skeletal, slow like	0.047
smyhc2	slow myosin heavy chain 2	0.046	Human Mouse Rat Fly
hk1	hexokinase 1	0.045
atp1b1a	ATPase, Na+/K+ transporting, beta 1a polypeptide	0.043	Human Mouse
atp1a3b	ATPase, Na+/K+ transporting, alpha 3b polypeptide	0.043	Zebrafish Worm Fly
hsp90a.2	heat shock protein 90-alpha 2	0.042	Human Worm
smyhc1	slow myosin heavy chain 1	0.042	Mouse Fly
gapdhs	glyceraldehyde-3-phosphate dehydrogenase, spermatogenic	0.041
pafah1b1b	platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit b	0.041	Mouse
tpm3	tropomyosin 3	0.041
atp5a1	ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	0.039	Human Mouse
cltca	clathrin, heavy polypeptide a (Hc)	0.037
mettl11a	methyltransferase like 11A	0.037
gclc	glutamate-cysteine ligase, catalytic subunit	0.037
jun	jun proto-oncogene	0.036	Human
rras	related RAS viral (r-ras) oncogene homolog	0.036	Human Yeast
tnnt2a	troponin T2a, cardiac	0.035
ndufs4	NADH dehydrogenase (ubiquinone) Fe-S protein 4, (NADH-coenzyme Q reductase)	0.033
gnl2	guanine nucleotide binding protein-like 2 (nucleolar)	0.033
pabpc1a	poly A binding protein, cytoplasmic 1 a	0.032
ndel1a	nudE nuclear distribution gene E homolog like 1 (A. nidulans) A	0.032	Mouse
atp1b3b	ATPase, Na+/K+ transporting, beta 3b polypeptide	0.031	Human
foxn4	forkhead box N4	0.030
bactin2	bactin2	0.030
atp1a1a.4	ATPase, Na+/K+ transporting, alpha 1a.4 polypeptide	0.029	Human Zebrafish Mouse Rat Worm Fly
cox4i1	cytochrome c oxidase subunit IV isoform 1	0.029	Worm
pvalb4	parvalbumin 4	0.029
ncor1	nuclear receptor co-repressor 1	0.028
atp1b1b	ATPase, Na+/K+ transporting, beta 1b polypeptide	0.027
atp6v0ca	ATPase, H+ transporting, lysosomal, V0 subunit c, a	0.027
pvrl1b	poliovirus receptor-related 1b	0.027
ywhaqb	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b	0.027
ryr3	ryanodine receptor 3	0.026
aldocb	aldolase C, fructose-bisphosphate, b	0.025
eno3	enolase 3, (beta, muscle)	0.025
sncgb	synuclein, gamma b (breast cancer-specific protein 1)	0.025
tpm4	tropomyosin 4	0.024
acta1b	actin, alpha 1b, skeletal muscle	0.024
tnni2a.4	troponin I, skeletal, fast 2a.4	0.023
tm9sf2	transmembrane 9 superfamily member 2	0.023
scinlb	scinderin like b	0.023
mat2a	methionine adenosyltransferase II, alpha	0.022	Human
nf1a	neurofibromin 1a	0.022	Mouse Rat Fly
got2b	glutamic-oxaloacetic transaminase 2b, mitochondrial (aspartate aminotransferase 2)	0.022
arpc5a	actin related protein 2/3 complex, subunit 5A	0.021
hk2	hexokinase 2	0.021
bcl2l1	bcl2-like 1	0.021	Worm
sdhc	succinate dehydrogenase complex, subunit C, integral membrane protein	0.020	Worm
atp5d	ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	0.020	Human
tpi1b	triosephosphate isomerase 1b	0.020
slc4a2b	solute carrier family 4, anion exchanger, member 2b	0.020
cct5	chaperonin containing TCP1, subunit 5 (epsilon)	0.019
ppargc1al	peroxisome proliferator-activated receptor gamma, coactivator 1 alpha like	0.019
uqcrc1	ubiquinol-cytochrome c reductase core protein I	0.019
pvalb1	parvalbumin 1	0.019
iqgap1	IQ motif containing GTPase activating protein 1	0.019
gsna	gelsolin a	0.018
plk4	polo-like kinase 4 (Drosophila)	0.018
arf1	ADP-ribosylation factor 1	0.018
actc1b	actin, alpha, cardiac muscle 1b	0.017
mettl2a	methyltransferase like 2A	0.017
slc38a2	solute carrier family 38, member 2	0.017
bcl2	B-cell leukemia/lymphoma 2	0.016	Worm
adrb2a	adrenergic receptor, beta 2a	0.016
ache	acetylcholinesterase	0.016
ndufa9	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9	0.016
optc	opticin	0.016
zgc:56085	zgc:56085	0.016
aaas	achalasia, adrenocortical insufficiency, alacrimia	0.016
ndufa8	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8	0.016
dnm1l	dynamin 1-like	0.016	Human
her3	hairy-related 3	0.016
polr2d	polymerase (RNA) II (DNA directed) polypeptide D	0.016
gria2b	glutamate receptor, ionotropic, AMPA 2b	0.015
slc25a12	solute carrier family 25 (mitochondrial carrier, Aralar), member 12	0.015
ptmab	prothymosin, alpha b	0.015
uqcrc2a	ubiquinol-cytochrome c reductase core protein IIa	0.015
atp6v1h	ATPase, H+ transporting, lysosomal, V1 subunit H	0.015
ndufs2	NADH dehydrogenase (ubiquinone) Fe-S protein 2	0.015	Worm
ndufb8	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8	0.015
spry4	sprouty (Drosophila) homolog 4	0.015
srpr	signal recognition particle receptor (docking protein)	0.015
dclk2	doublecortin-like kinase 2	0.015
immt	inner membrane protein, mitochondrial (mitofilin)	0.015
zbtb4	zinc finger and BTB domain containing 4	0.014
dlst	dihydrolipoamide S-succinyltransferase	0.014
cdc42ep1	CDC42 effector protein (Rho GTPase binding) 1	0.014
gna14	guanine nucleotide binding protein (G protein), alpha 14	0.014
lrpprc	leucine-rich PPR-motif containing	0.014
arf5	ADP-ribosylation factor 5	0.014
eif3hb	eukaryotic translation initiation factor 3, subunit H, b	0.014
zgc:153997	zgc:153997	0.014
bms1l	BMS1-like, ribosome assembly protein (yeast)	0.014
zgc:64133	zgc:64133	0.014
pparg	peroxisome proliferator activated receptor gamma	0.014
gnaia	guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a	0.013
txnrd1	thioredoxin reductase 1	0.013
thy1	Thy-1 cell surface antigen	0.013
ywhai	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, iota polypeptide	0.013
pfn2	profilin 2	0.013	Human
psmd3	proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	0.013
glula	glutamate-ammonia ligase (glutamine synthase) a	0.013
slc7a3	solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	0.013
flot1b	flotillin 1b	0.013
mcl1b	myeloid cell leukemia sequence 1b	0.013	Worm
pvalb8	parvalbumin 8	0.013
rfc3	replication factor C (activator 1) 3	0.013	Human Yeast
msna	moesin a	0.013
nbl1	neuroblastoma, suppression of tumorigenicity 1	0.012
bysl	bystin-like	0.012
ctsf	cathepsin F	0.012
tpma	alpha-tropomyosin	0.012
ipo9	importin 9	0.012
desma	desmin a	0.012
calb2a	calbindin 2a	0.012
emx2	empty spiracles homeobox 2	0.012
zgc:73293	zgc:73293	0.012
sept2	septin 2	0.012
tomm34	translocase of outer mitochondrial membrane 34	0.012
ap1s2	adaptor-related protein complex 1, sigma 2 subunit	0.011
pdcd6	programmed cell death 6	0.011
dhx16	DEAH (Asp-Glu-Ala-His) box polypeptide 16	0.011	Yeast
sdhb	succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	0.011
ckma	creatine kinase, muscle a	0.011
cdc42	cell division cycle 42	0.011	Yeast Mouse Worm Fly
ttc35	tetratricopeptide repeat domain 35	0.011
flncb	filamin C, gamma b (actin binding protein 280)	0.011
myhz1.2	myosin, heavy polypeptide 1.2, skeletal muscle	0.011
rab13	RAB13, member RAS oncogene family	0.011	Human Yeast
im:7137453	im:7137453	0.011
tnfrsf1a	tumor necrosis factor receptor superfamily, member 1a	0.011
pak2a	p21 (CDKN1A)-activated kinase 2a	0.011
flr	fleer	0.011
nras	neuroblastoma RAS viral (v-ras) oncogene homolog	0.011	Worm Fly
pdhb	pyruvate dehydrogenase (lipoamide) beta	0.011
lmx1b.1	LIM homeobox transcription factor 1, beta 1	0.011
myog	myogenin	0.011
melk	maternal embryonic leucine zipper kinase	0.011
hccs	holocytochrome c synthase	0.011
pax6b	paired box gene 6b	0.011
casz1	castor zinc finger 1	0.011
slc25a25a	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25a	0.011
wu:fb71f10	wu:fb71f10	0.011
smg7	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.011
ptpn6	protein tyrosine phosphatase, non-receptor type 6	0.010
vps35	vacuolar protein sorting 35 (yeast)	0.010
s100b	S100 calcium binding protein, beta (neural)	0.010
zgc:66286	zgc:66286	0.010
tm9sf4	transmembrane 9 superfamily protein member 4	0.010
lamc1	laminin, gamma 1	0.010
gro2	groucho 2	0.010
dlat	dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)	0.010
ddx56	DEAD (Asp-Glu-Ala-Asp) box polypeptide 56	0.010	Yeast
cox5ab	cytochrome c oxidase subunit Vab	0.010
zgc:152873	zgc:152873	0.010
dnajb11	DnaJ (Hsp40) homolog, subfamily B, member 11	0.010
scinla	scinderin like a	0.010
neb	nebulin	0.010
mecp2	methyl CpG binding protein 2	0.010	Mouse
derl1	Der1-like domain family, member 1	0.010
arpc5b	actin related protein 2/3 complex, subunit 5B	0.010
trpc1	transient receptor potential cation channel, subfamily C, member 1	0.010
prdx2	peroxiredoxin 2	0.010
dag1	dystroglycan 1	0.010