The network for 'mrna metabolic process' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

mrna metabolic process

The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.

NameDescriptionProbabilityFunc Analog Organism
AGO1Argonaute-10.962
U2af38U2 small nuclear riboprotein auxiliary factor 380.950
14-3-3epsilonCG31196 gene product from transcript CG31196-RA0.949
Spt6CG12225 gene product from transcript CG12225-RA0.949
scnyscrawny0.948
larkCG8597 gene product from transcript CG8597-RD0.913
rinrasputin0.885
E(z)Enhancer of zeste0.857
B52CG10851 gene product from transcript CG10851-RB0.850
Su(var)3-3Suppressor of variegation 3-30.833
Mfap1Microfibril-associated protein 10.815
CG7971CG7971 gene product from transcript CG7971-RC0.804
SmFSmall ribonucleoprotein particle protein SmF0.784
Bap170Brahma associated protein 170kD0.769
CG2199CG2199 gene product from transcript CG2199-RB0.713
PenPendulin0.712
Ard1Arrest defective 10.692
U2ACG1406 gene product from transcript CG1406-RA0.685
LamLamin0.676
snfsans fille0.646
blbancal0.623
Ntf-2Nuclear transport factor-20.619
Rat1CG10354 gene product from transcript CG10354-RA0.614
cazcabeza0.613
SC35CG5442 gene product from transcript CG5442-RC0.609
Hrb27CHeterogeneous nuclear ribonucleoprotein at 27C0.603
CG4849CG4849 gene product from transcript CG4849-RA0.594
Rcd1Reduction in Cnn dots 10.558
Bap55Brahma associated protein 55kD0.552
hephhephaestus0.541
Hel25EHelicase at 25E0.511
CG6197CG6197 gene product from transcript CG6197-RA0.489
rumprumpelstiltskin0.478
Nup358Nucleoporin 3580.477
U2af50U2 small nuclear riboprotein auxiliary factor 500.476
Smnsurvival motor neuron0.469
tho2CG31671 gene product from transcript CG31671-RA0.467
Nup154Nucleoporin 1540.467
ecdecdysoneless0.466
cdc2CG5363 gene product from transcript CG5363-RA0.459
CG1240CG1240 gene product from transcript CG1240-RA0.442
CG5746CG5746 gene product from transcript CG5746-RB0.440
Hrb98DEHeterogeneous nuclear ribonucleoprotein at 98DE0.440
RnpS1RNA-binding protein S10.439
CG8108CG8108 gene product from transcript CG8108-RA0.430
CG6015CG6015 gene product from transcript CG6015-RA0.428
CG4785CG4785 gene product from transcript CG4785-RA0.423
CG10333CG10333 gene product from transcript CG10333-RA0.422
dmtdalmatian0.416
CG4747CG4747 gene product from transcript CG4747-RB0.413
Zn72DCG5215 gene product from transcript CG5215-RB0.411
tsutsunagi0.406
CG4699CG4699 gene product from transcript CG4699-RJ0.399
traltrailer hitch0.393
CG11266CG11266 gene product from transcript CG11266-RD0.386
CG6610CG6610 gene product from transcript CG6610-RA0.386
CstF-50CG2261 gene product from transcript CG2261-RA0.377
CG5198CG5198 gene product from transcript CG5198-RA0.374
dcodiscs overgrown0.373
picpiccolo0.359
CG16903CG16903 gene product from transcript CG16903-RA0.358
LSm7CG13277 gene product from transcript CG13277-RA0.354
Srp54CG4602 gene product from transcript CG4602-RA0.353
ctpcut up0.349
aubaubergine0.348
alpha-Catalpha Catenin0.348
UbcD2Ubiquitin conjugating enzyme 20.346
CG4038CG4038 gene product from transcript CG4038-RA0.343
TBPHCG10327 gene product from transcript CG10327-RC0.338
CG13900CG13900 gene product from transcript CG13900-RA0.336
CG8149CG8149 gene product from transcript CG8149-RA0.334
HmgDHigh mobility group protein D0.334
Bj1Bj1 protein0.330
CG1347CG1347 gene product from transcript CG1347-RB0.330
CG3358CG3358 gene product from transcript CG3358-RA0.325
His2AvHistone H2A variant0.322
Ge-1CG6181 gene product from transcript CG6181-RA0.318
Slu7CG1420 gene product from transcript CG1420-RA0.317
Nup75Nucleoporin 750.313
wdbwiderborst0.309
pelopelota0.304
tratransformer0.298
Atx2Ataxin-20.298
su(Hw)suppressor of Hairy wing0.294
RpII215RNA polymerase II 215kD subunit0.294
RpII33RNA polymerase II 33kD subunit0.292
psqpipsqueak0.291
Pabp2CG2163 gene product from transcript CG2163-RA0.289
Rpb5CG11979 gene product from transcript CG11979-RA0.283
hayhaywire0.283
CG4751CG4751 gene product from transcript CG4751-RA0.282
SfmbtScm-related gene containing four mbt domains0.278
LSm3CG31184 gene product from transcript CG31184-RA0.272
MBD-R2CG10042 gene product from transcript CG10042-RB0.271
CG10418CG10418 gene product from transcript CG10418-RA0.267
Rack1Receptor of activated protein kinase C 10.260
CG11107CG11107 gene product from transcript CG11107-RA0.256
Nup50Nucleoporin 500.253
nufnuclear fallout0.253
dbedribble0.250
Loading network...
Caenorhabditis elegans
NameDescriptionProbabilityFunc Analog Organism
cacn-1Protein CACN-10.550
prp-21Protein PRP-210.444
Y66H1A.4Protein Y66H1A.40.401
C16A3.1Protein C16A3.10.369
snr-4Protein SNR-40.357
snr-7Protein SNR-70.348
rsp-8Protein RSP-80.333
npp-9Protein NPP-90.324
snr-1Protein SNR-10.307
suf-1Protein SUF-10.304
rpb-11Protein RPB-110.299
snr-6Protein SNR-60.279
F26B1.2Protein F26B1.20.265
cul-1Protein CUL-10.264
rsp-1Protein RSP-10.259
C44E4.4Protein C44E4.40.240
eya-1Protein EYA-10.232
dpy-30Protein DPY-300.220
snr-2Protein SNR-20.207
cyn-15Protein CYN-150.204
CELE_C17E4.6Protein C17E4.60.201
cdc-26Protein CDC-260.181
T28D9.1Protein T28D9.10.175
F09D1.1Protein F09D1.10.174
lsm-7Protein LSM-70.172
uaf-2Protein UAF-20.169
pabp-2Protein PABP-20.166
aly-3Protein ALY-30.166
hrpf-1Protein HRPF-10.159
rsp-7Protein RSP-70.151
hrp-1Protein HRP-10.150
pus-1Protein PUS-10.148
lsm-5Protein LSM-50.147
eftu-2Protein EFTU-20.146
sec-31Protein SEC-310.140
ruvb-1Protein RUVB-10.134
rpb-10Protein RPB-100.133
CELE_W03F9.10Protein W03F9.100.133
snr-5Protein SNR-50.131
prp-8Protein PRP-80.126
F58E10.3Protein F58E10.30.123
CELE_F23A7.4Protein F23A7.40.121
emb-5Protein EMB-50.120
CELE_Y59A8B.10Protein Y59A8B.100.120
C48B6.2Protein C48B6.20.117
emb-4Protein EMB-40.117
C32D5.11Protein C32D5.110.117
smg-3Protein SMG-30.116
CELE_C12D8.1Protein C12D8.10.114
rnp-6Protein RNP-60.113
B0464.2Protein B0464.20.112
ran-2Protein RAN-20.110
H06I04.3Protein H06I04.30.105
CELE_Y75B8A.31Protein Y75B8A.310.103
F55F8.9Protein F55F8.90.101
attf-2Protein ATTF-20.100
csr-1Protein CSR-10.100
CELE_R02D3.3Protein R02D3.30.100
CELE_Y106G6D.7Protein Y106G6D.70.098
rnp-5Protein RNP-50.098
smgl-1Protein SMGL-10.097
rpb-6Protein RPB-60.094
skp-1Protein SKP-10.092
hcp-3Protein HCP-30.092
fipp-1Protein FIPP-10.092
thoc-3Protein THOC-30.092
exc-7Protein EXC-70.089
CELE_C16C10.4Protein C16C10.40.088
nol-5Protein NOL-50.087
npp-11Protein NPP-110.087
mag-1Protein MAG-10.086
kin-10Protein KIN-100.086
smg-2Protein SMG-20.082
lst-3Protein LST-30.080
CELE_R06A4.2Protein R06A4.20.079
cux-7Protein CUX-70.078
ZK418.9Protein ZK418.90.077
K05C4.5Protein K05C4.50.077
teg-1Protein TEG-10.077
pri-2Protein PRI-20.076
let-49Protein LET-490.076
zyg-1Protein ZYG-10.076
moc-3Protein MOC-30.075
ncbp-2Protein NCBP-20.075
CELE_F19F10.9Protein F19F10.90.075
let-502Protein LET-5020.074
tac-1Protein TAC-10.074
smu-2Protein SMU-20.073
B0035.1Protein B0035.10.073
lmn-1Protein LMN-10.073
set-16Protein SET-160.072
eif-6Protein EIF-60.072
K07C5.3Protein K07C5.30.071
eef-1A.1Protein EEF-1A.10.070
swd-2.2Protein SWD-2.20.070
F08B4.7Protein F08B4.70.070
cyn-12Protein CYN-120.069
Y48E1A.1Protein Y48E1A.10.068
C01F1.1Protein C01F1.10.068
aos-1Protein AOS-10.067
Loading network...
Danio rerio
NameDescriptionProbabilityFunc Analog Organism
snrnp70small nuclear ribonucleoprotein 70 (U1)0.667
hnrnph1lheterogeneous nuclear ribonucleoprotein H1, like0.614
srsf2serine/arginine-rich splicing factor 20.584
snrpd3lsmall nuclear ribonucleoprotein D3 polypeptide, like0.489
rbmxRNA binding motif protein, X-linked0.361
sf1splicing factor 10.269
snrpasmall nuclear ribonucleoprotein polypeptide A0.241
smx5smx50.228
hnrnpa0lheterogeneous nuclear ribonucleoprotein A0, like0.225
smu1smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)0.217
khdrbs1aKH domain containing, RNA binding, signal transduction associated 1a0.205
ewsr1bEwing sarcoma breakpoint region 1b0.201
sf3b1splicing factor 3b, subunit 10.195
thoc5THO complex 50.191
rtf1Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)0.187
u2af1U2(RNU2) small nuclear RNA auxiliary factor 10.183
snrpd1small nuclear ribonucleoprotein D1 polypeptide0.175
ints6integrator complex subunit 60.167
ddx39aaDEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa0.166
calm3bcalmodulin 3b (phosphorylase kinase, delta)0.161
puf60bpoly-U binding splicing factor b0.155
phf5aPHD finger protein 5A0.153
api5apoptosis inhibitor 50.153
magohmago-nashi homolog, proliferation-associated (Drosophila)0.147
ef1aelongation factor 1-alpha0.147
srsf6bserine/arginine-rich splicing factor 6b0.140
srsf6aserine/arginine-rich splicing factor 6a0.139
srrtserrate RNA effector molecule homolog (Arabidopsis)0.136
prpf8pre-mRNA processing factor 80.130
safbscaffold attachment factor B0.127
prpf39PRP39 pre-mRNA processing factor 39 homolog (yeast)0.126
cstf1cleavage stimulation factor, 3' pre-RNA, subunit 10.126
dhx16DEAH (Asp-Glu-Ala-His) box polypeptide 160.120
zgc:112425zgc:1124250.118
rbm39aRNA binding motif protein 39a0.118
ilf2interleukin enhancer binding factor 20.117
tardbpTAR DNA binding protein0.116
mbnl2muscleblind-like 2 (Drosophila)0.114
tra2atransformer-2 alpha0.113
ybx1Y box binding protein 10.107
h2afvlH2A histone family, member V, like0.105
upf2UPF2 regulator of nonsense transcripts homolog (yeast)0.104
wu:fb63c04wu:fb63c040.103
zgc:92194zgc:921940.100
luc7lLUC7-like (S. cerevisiae)0.097
plrg1pleiotropic regulator 10.097
pcbp2poly(rC) binding protein 20.097
upf1upf1 regulator of nonsense transcripts homolog (yeast)0.096
setbSET translocation (myeloid leukemia-associated) B0.094
LOC570775protein argonaute-1-like0.092
si:ch211-59d15.5si:ch211-59d15.50.092
med18mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)0.091
snrpd3small nuclear ribonucleoprotein D3 polypeptide0.090
zgc:86598zgc:865980.090
spsb1splA/ryanodine receptor domain and SOCS box containing 10.089
si:dkey-67c22.2si:dkey-67c22.20.089
snrpb2small nuclear ribonucleoprotein polypeptide B20.088
ppp4caprotein phosphatase 4 (formerly X), catalytic subunit a0.086
zgc:77052zgc:770520.082
ercc2excision repair cross-complementing rodent repair deficiency, complementation group 20.079
phaxphosphorylated adaptor for RNA export0.078
h3f3cH3 histone, family 3C0.077
dhx37DEAH (Asp-Glu-Ala-His) box polypeptide 370.077
sulf2lsulfatase 2, like0.075
LOC100003514protein kinase C alpha type-like0.075
zgc:136380zgc:1363800.075
trnau1apltRNA selenocysteine 1 associated protein 1, like0.073
znf207azinc finger protein 207, a0.070
atf4b2activating transcription factor 4b20.068
cd99l2CD99 antigen-like 20.066
u2af2bU2 small nuclear RNA auxiliary factor 2b0.066
pqbp1lpolyglutamine binding protein 1-like0.066
cpsf6cleavage and polyadenylation specific factor 60.065
hnrnpkheterogeneous nuclear ribonucleoprotein K0.065
ptbp2polypyrimidine tract binding protein 20.065
epb41l5erythrocyte membrane protein band 4.1 like 50.064
cpsf2cleavage and polyadenylation specific factor 20.064
atrxalpha thalassemia/mental retardation syndrome X-linked homolog (human)0.064
npm1nucleophosmin 10.063
wu:fb58e05wu:fb58e050.063
rbb4lretinoblastoma binding protein 4, like0.062
tcea1transcription elongation factor A (SII), 10.062
smarce1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 10.061
srsf11serine/arginine-rich splicing factor 110.058
rbm4.1RNA binding motif protein 4.10.057
gabpaGA-binding protein transcription factor, alpha subunit0.056
smad5MAD homolog 5 (Drosophila)0.055
g3bp1GTPase activating protein (SH3 domain) binding protein 10.055
thoc1THO complex 10.054
anp32aacidic (leucine-rich) nuclear phosphoprotein 32 family, member A0.054
srsf4serine/arginine-rich splicing factor 40.051
ctr9Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)0.051
zgc:136773zgc:1367730.050
acvr1lactivin A receptor, type I like0.050
appaamyloid beta (A4) precursor protein a0.050
zgc:56409zgc:564090.050
ddx19DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast)0.050
si:dkey-181m9.9si:dkey-181m9.90.049
im:7153552im:71535520.049
elavl1ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)0.049
Loading network...
Homo sapiens
NameDescriptionProbabilityFunc Analog Organism
MAGOHmago-nashi homolog, proliferation-associated (Drosophila)1.000
UPF1UPF1 regulator of nonsense transcripts homolog (yeast)1.000
EIF4A3eukaryotic translation initiation factor 4A31.000
PABPC1poly(A) binding protein, cytoplasmic 11.000
SRRM1serine/arginine repetitive matrix 11.000
RNPS1RNA binding protein S1, serine-rich domain1.000
SF3A2splicing factor 3a, subunit 2, 66kDa1.000
SNRPD1small nuclear ribonucleoprotein D1 polypeptide 16kDa1.000
U2AF2U2 small nuclear RNA auxiliary factor 21.000
SRPK2SRSF protein kinase 21.000
SRSF3serine/arginine-rich splicing factor 31.000
RBM10RNA binding motif protein 101.000
LSM3LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)1.000
SNRPBsmall nuclear ribonucleoprotein polypeptides B and B11.000
U2AF1U2 small nuclear RNA auxiliary factor 11.000
QKIquaking homolog, KH domain RNA binding (mouse)1.000
SRPK1SRSF protein kinase 11.000
RBM8ARNA binding motif protein 8A0.999
PCBP1poly(rC) binding protein 10.999
SMG1SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)0.999
SNRPFsmall nuclear ribonucleoprotein polypeptide F0.999
YWHAGtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide0.999
SRSF2serine/arginine-rich splicing factor 20.999
PTBP1polypyrimidine tract binding protein 10.999
ILF3interleukin enhancer binding factor 3, 90kDa0.998
DHX15DEAH (Asp-Glu-Ala-His) box polypeptide 150.997
RBM39RNA binding motif protein 390.997
THOC4THO complex 40.997
HNRNPKheterogeneous nuclear ribonucleoprotein K0.996
LSM2LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)0.996
PRPF38APRP38 pre-mRNA processing factor 38 (yeast) domain containing A0.996
SNRPD3small nuclear ribonucleoprotein D3 polypeptide 18kDa0.994
LSM7LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)0.994
PRPF8PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)0.993
HNRNPCheterogeneous nuclear ribonucleoprotein C (C1/C2)0.993
RBFOX2RNA binding protein, fox-1 homolog (C. elegans) 20.991
UPF3BUPF3 regulator of nonsense transcripts homolog B (yeast)0.990
SF3B1splicing factor 3b, subunit 1, 155kDa0.989
TNRC6Atrinucleotide repeat containing 6A0.986
SNRPAsmall nuclear ribonucleoprotein polypeptide A0.985
EIF2C2eukaryotic translation initiation factor 2C, 20.983
HNRNPH2heterogeneous nuclear ribonucleoprotein H2 (H')0.980
TRA2Btransformer 2 beta homolog (Drosophila)0.980
SNRPEsmall nuclear ribonucleoprotein polypeptide E0.980
HNRNPUL1heterogeneous nuclear ribonucleoprotein U-like 10.979
TP53tumor protein p530.975
PRPF4PRP4 pre-mRNA processing factor 4 homolog (yeast)0.975
GPKOWG patch domain and KOW motifs0.975
EFTUD2elongation factor Tu GTP binding domain containing 20.972
YWHAZtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide0.971
SF3A1splicing factor 3a, subunit 1, 120kDa0.969
SF1splicing factor 10.968
PRPF19PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)0.965
NAA38N(alpha)-acetyltransferase 38, NatC auxiliary subunit0.963
HNRNPA1heterogeneous nuclear ribonucleoprotein A10.963
SRSF7serine/arginine-rich splicing factor 70.960
EIF2C1eukaryotic translation initiation factor 2C, 10.958
SRSF1serine/arginine-rich splicing factor 10.957
PCBP2poly(rC) binding protein 20.956
PAN3PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)0.955
UPF3AUPF3 regulator of nonsense transcripts homolog A (yeast)0.954
SAFBscaffold attachment factor B0.950
SNRNP200small nuclear ribonucleoprotein 200kDa (U5)0.947
DDX5DEAD (Asp-Glu-Ala-Asp) box polypeptide 50.947
YTHDC1YTH domain containing 10.945
RBMXRNA binding motif protein, X-linked0.940
EXOSC3exosome component 30.940
ATXN1ataxin 10.939
SFPQsplicing factor proline/glutamine-rich0.925
MATR3matrin 30.925
EXOSC2exosome component 20.921
HNRNPMheterogeneous nuclear ribonucleoprotein M0.920
LEO1Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)0.916
EIF3Aeukaryotic translation initiation factor 3, subunit A0.913
HNRNPH1heterogeneous nuclear ribonucleoprotein H1 (H)0.909
PRMT5protein arginine methyltransferase 50.904
CPSF2cleavage and polyadenylation specific factor 2, 100kDa0.902
CTNNBL1catenin, beta like 10.897
WWOXWW domain containing oxidoreductase0.892
ARGLU1arginine and glutamate rich 10.891
ELAVL1ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)0.890
EXOSC7exosome component 70.883
USP7ubiquitin specific peptidase 7 (herpes virus-associated)0.881
SUGP1SURP and G patch domain containing 10.868
RTF1Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)0.868
HNRNPUheterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)0.862
CDC5LCDC5 cell division cycle 5-like (S. pombe)0.861
PNNpinin, desmosome associated protein0.847
RBFOX1RNA binding protein, fox-1 homolog (C. elegans) 10.843
SRSF9serine/arginine-rich splicing factor 90.836
DCP1ADCP1 decapping enzyme homolog A (S. cerevisiae)0.835
CLNS1Achloride channel, nucleotide-sensitive, 1A0.828
TOB1transducer of ERBB2, 10.827
SF3B4splicing factor 3b, subunit 4, 49kDa0.817
PRPF3PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae)0.804
HNRNPH3heterogeneous nuclear ribonucleoprotein H3 (2H9)0.789
PUF60poly-U binding splicing factor 60KDa0.785
CNOT7CCR4-NOT transcription complex, subunit 70.776
CAND1cullin-associated and neddylation-dissociated 10.774
YBX1Y box binding protein 10.772
Loading network...
Mus musculus
NameDescriptionProbabilityFunc Analog Organism
Srsf1serine/arginine-rich splicing factor 10.987
Sfpqsplicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)0.944
Hnrpdlheterogeneous nuclear ribonucleoprotein D-like0.937
RbmxrtRNA binding motif protein, X chromosome retrogene0.901
Srsf3serine/arginine-rich splicing factor 30.884
Hnrnpabheterogeneous nuclear ribonucleoprotein A/B0.883
Phf5aPHD finger protein 5A0.857
Srsf2serine/arginine-rich splicing factor 20.831
Luc7l2LUC7-like 2 (S. cerevisiae)0.829
TardbpTAR DNA binding protein0.801
Eif2c2eukaryotic translation initiation factor 2C, 20.795
Pcnaproliferating cell nuclear antigen0.767
Magohmago-nashi homolog, proliferation-associated (Drosophila)0.763
Hnrnpkheterogeneous nuclear ribonucleoprotein K0.758
Srsf6serine/arginine-rich splicing factor 60.751
Prmt1protein arginine N-methyltransferase 10.740
Fusfusion, derived from t(12;16) malignant liposarcoma (human)0.738
Cdk4cyclin-dependent kinase 40.731
Hnrnph1heterogeneous nuclear ribonucleoprotein H10.729
Ddx5DEAD (Asp-Glu-Ala-Asp) box polypeptide 50.713
Pabpn1poly(A) binding protein, nuclear 10.704
Ddx39bDEAD (Asp-Glu-Ala-Asp) box polypeptide 39B0.703
Hnrnpa2b1heterogeneous nuclear ribonucleoprotein A2/B10.701
Rbm14RNA binding motif protein 140.691
Kpna2karyopherin (importin) alpha 20.673
Srrtserrate RNA effector molecule homolog (Arabidopsis)0.672
2500003M10RikRIKEN cDNA 2500003M10 gene0.670
Khdrbs1KH domain containing, RNA binding, signal transduction associated 10.643
Ddx6DEAD (Asp-Glu-Ala-Asp) box polypeptide 60.639
Safbscaffold attachment factor B0.635
Wdr77WD repeat domain 770.609
Hnrnpdheterogeneous nuclear ribonucleoprotein D0.606
Elavl1ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)0.602
Hnrnpa1heterogeneous nuclear ribonucleoprotein A10.593
Emg1EMG1 nucleolar protein homolog (S. cerevisiae)0.589
Hnrnpfheterogeneous nuclear ribonucleoprotein F0.588
Srsf7serine/arginine-rich splicing factor 70.568
Srrm1serine/arginine repetitive matrix 10.568
Ppp1ccprotein phosphatase 1, catalytic subunit, gamma isoform0.564
Erhenhancer of rudimentary homolog (Drosophila)0.563
Fubp1far upstream element (FUSE) binding protein 10.562
Hnrnpa3heterogeneous nuclear ribonucleoprotein A30.536
Ptmaprothymosin alpha0.532
Rbm10RNA binding motif protein 100.508
Actl6aactin-like 6A0.507
Dhx9DEAH (Asp-Glu-Ala-His) box polypeptide 90.504
Snrpgsmall nuclear ribonucleoprotein polypeptide G0.498
Zc3h11azinc finger CCCH type containing 11A0.487
2310036O22RikRIKEN cDNA 2310036O22 gene0.487
Dhx15DEAH (Asp-Glu-Ala-His) box polypeptide 150.477
Xab2XPA binding protein 20.472
Ilf2interleukin enhancer binding factor 20.460
Safb2scaffold attachment factor B20.449
Cks2CDC28 protein kinase regulatory subunit 20.448
Thoc4THO complex 40.439
Mybbp1aMYB binding protein (P160) 1a0.426
Snrpd1small nuclear ribonucleoprotein D10.424
Syncripsynaptotagmin binding, cytoplasmic RNA interacting protein0.403
Nononon-POU-domain-containing, octamer binding protein0.402
Ccnb1cyclin B10.402
Srek1splicing regulatory glutamine/lysine-rich protein 10.398
Anp32eacidic (leucine-rich) nuclear phosphoprotein 32 family, member E0.397
Puf60poly-U binding splicing factor 600.390
Acin1apoptotic chromatin condensation inducer 10.388
Nhp2l1NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)0.387
Cnot1CCR4-NOT transcription complex, subunit 10.385
Hnrpllheterogeneous nuclear ribonucleoprotein L-like0.384
Rc3h1RING CCCH (C3H) domains 10.382
Brd2bromodomain containing 20.380
Ywhaetyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide0.380
Dtymkdeoxythymidylate kinase0.369
Brd4bromodomain containing 40.361
Ldb3LIM domain binding 30.356
Polr2dpolymerase (RNA) II (DNA directed) polypeptide D0.343
Rbm8aRNA binding motif protein 8a0.342
Hnrnph2heterogeneous nuclear ribonucleoprotein H20.336
Snrpesmall nuclear ribonucleoprotein E0.334
Stip1stress-induced phosphoprotein 10.318
Exosc10exosome component 100.318
Smarca4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 40.309
Rbm39RNA binding motif protein 390.302
Prpf38bPRP38 pre-mRNA processing factor 38 (yeast) domain containing B0.298
Usp7ubiquitin specific peptidase 70.294
Nxf1nuclear RNA export factor 1 homolog (S. cerevisiae)0.290
Tra2btransformer 2 beta homolog (Drosophila)0.284
Rnps1ribonucleic acid binding protein S10.274
SarnpSAP domain containing ribonucleoprotein0.269
Ppp2r2aprotein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform0.262
Bptfbromodomain PHD finger transcription factor0.260
Ylpm1YLP motif containing 10.259
Usp10ubiquitin specific peptidase 100.257
Cdk1cyclin-dependent kinase 10.257
Neurl1aneuralized homolog 1A (Drosophila)0.255
Hcfc1host cell factor C10.253
Hnrnpmheterogeneous nuclear ribonucleoprotein M0.252
Fblfibrillarin0.250
Pnnpinin0.250
Tfdp1transcription factor Dp 10.249
Nudt21nudix (nucleoside diphosphate linked moiety X)-type motif 210.249
Mrpl3mitochondrial ribosomal protein L30.241
Loading network...
Rattus norvegicus
NameDescriptionProbabilityFunc Analog Organism
Rnps1ribonucleic acid binding protein S10.704
Hnrph1heterogeneous nuclear ribonucleoprotein H10.537
Hmgb2high mobility group box 20.305
Sfrs2splicing factor, arginine/serine-rich 20.290
RbmxrtlRNA binding motif protein, X chromosome retrogene-like0.260
Tra2btransformer 2 beta homolog (Drosophila)0.243
Ccnl1cyclin L10.225
Cand1cullin-associated and neddylation-dissociated 10.195
Nup88nucleoporin 880.188
Sfrs1splicing factor, arginine/serine-rich 10.188
Sf3a3splicing factor 3a, subunit 30.175
LOC686980similar to arsenate resistance protein 20.151
Bat1HLA-B associated transcript 10.132
Prpf39PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)0.125
RGD1565775similar to RIKEN cDNA 2810403A070.115
Trim28tripartite motif-containing 280.098
Plrg1pleiotropic regulator 1, PRL1 homolog (Arabidopsis)0.095
Hist1h1ahistone cluster 1, H1a0.093
Khdrbs1KH domain containing, RNA binding, signal transduction associated 10.088
Papolapoly (A) polymerase alpha0.086
Akap8A kinase (PRKA) anchor protein 80.085
Clk1CDC-like kinase 10.080
H3f3bH3 histone, family 3B0.079
Rsrc2arginine/serine-rich coiled-coil 20.073
FosFBJ osteosarcoma oncogene0.071
Ppp1r15aprotein phosphatase 1, regulatory (inhibitor) subunit 15A0.069
Bud13BUD13 homolog (S. cerevisiae)0.068
Snrpbsmall nuclear ribonucleoprotein polypeptides B and B10.067
Ruvbl1RuvB-like 1 (E. coli)0.062
Paf1Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)0.062
Hnrnpa1heterogeneous nuclear ribonucleoprotein A10.062
Hnrpdlheterogeneous nuclear ribonucleoprotein D-like0.060
Wdfy1WD repeat and FYVE domain containing 10.058
Hdac1histone deacetylase 10.058
Tcea1transcription elongation factor A (SII) 10.057
Gtf2e2general transcription factor IIE, polypeptide 2, beta0.056
Ywhaqtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide0.056
Mrps31mitochondrial ribosomal protein S310.053
Hsp90ab1heat shock protein 90 alpha (cytosolic), class B member 10.052
TardbpTAR DNA binding protein0.051
Ssrp1structure specific recognition protein 10.051
Sfpqsplicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)0.050
NsfN-ethylmaleimide-sensitive factor0.049
Hnrnph3heterogeneous nuclear ribonucleoprotein H3 (2H9)0.047
Ddx17DEAD (Asp-Glu-Ala-Asp) box polypeptide 170.046
Eif4heukaryotic translation initiation factor 4H0.045
Clns1achloride channel, nucleotide-sensitive, 1A0.042
Sfrs3splicing factor, arginine/serine-rich 30.041
Sfrs5splicing factor, arginine/serine-rich 50.041
CnbpCCHC-type zinc finger, nucleic acid binding protein0.040
Ttc3tetratricopeptide repeat domain 30.040
Wbp11WW domain binding protein 110.038
Creld2cysteine-rich with EGF-like domains 20.038
Eif4a3eukaryotic translation initiation factor 4A, isoform 30.037
Tial1Tia1 cytotoxic granule-associated RNA binding protein-like 10.035
Arf6ADP-ribosylation factor 60.035
Cdc20cell division cycle 20 homolog (S. cerevisiae)0.034
Tra2atransformer 2 alpha homolog (Drosophila)0.034
Arglu1arginine and glutamate rich 10.033
Luc7lLUC7-like (S. cerevisiae)0.032
Aqraquarius homolog (mouse)0.032
Cobra1cofactor of BRCA10.032
Dhx15DEAH (Asp-Glu-Ala-His) box polypeptide 150.032
Rbm8aRNA binding motif protein 8A0.032
Bcas2breast carcinoma amplified sequence 20.031
Racgap1Rac GTPase-activating protein 10.031
Hsp90aa1heat shock protein 90, alpha (cytosolic), class A member 10.031
Hnrnpa3heterogeneous nuclear ribonucleoprotein A30.031
Prmt1protein arginine methyltransferase 10.030
Sart3squamous cell carcinoma antigen recognized by T-cells 30.030
Tmpothymopoietin0.030
Anp32eacidic (leucine-rich) nuclear phosphoprotein 32 family, member E0.030
LOC687711similar to small nuclear ribonucleoprotein D30.029
Rbm39RNA binding motif protein 390.028
Ccnb1cyclin B10.028
Polr2bpolymerase (RNA) II (DNA directed) polypeptide B0.027
Eef2eukaryotic translation elongation factor 20.027
Top2atopoisomerase (DNA) II alpha0.026
Ube2cubiquitin-conjugating enzyme E2C0.025
Smarcb1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 10.025
Nxt1NTF2-like export factor 10.025
RabggtbRab geranylgeranyltransferase, beta subunit0.025
Rab1bRAB1B, member RAS oncogene family0.024
Srrm2serine/arginine repetitive matrix 20.024
Dkc1dyskeratosis congenita 1, dyskerin0.024
Rev1REV1 homolog (S. cerevisiae)0.023
Zranb2zinc finger, RAN-binding domain containing 20.023
Usf2upstream transcription factor 2, c-fos interacting0.022
Ewsr1Ewing sarcoma breakpoint region 10.022
Sart1squamous cell carcinoma antigen recognized by T cells0.022
Hmmrhyaluronan mediated motility receptor (RHAMM)0.022
Ptmaprothymosin alpha0.021
Hnrpmheterogeneous nuclear ribonucleoprotein M0.021
Ylpm1YLP motif containing 10.021
Znf830zinc finger protein 8300.021
Pcnaproliferating cell nuclear antigen0.021
SsbSjogren syndrome antigen B0.021
Cdkn3cyclin-dependent kinase inhibitor 30.020
Cpdcarboxypeptidase D0.020
Pttg1pituitary tumor-transforming 10.020
Loading network...
Saccharomyces cerevisiae
NameDescriptionProbabilityFunc Analog Organism
BRR2Brr2p1.000
PRP19Prp19p1.000
CWC2Cwc2p1.000
PRP8Prp8p1.000
SNU114Snu114p1.000
SNT309Snt309p1.000
CUS1Cus1p1.000
SMD2Smd2p1.000
SMB1Smb1p1.000
CLF1Clf1p1.000
CEF1Cef1p1.000
SMD3Smd3p1.000
STO1Sto1p1.000
LEA1Lea1p1.000
SMD1Smd1p1.000
SYF1Syf1p1.000
RSE1Rse1p1.000
HSH155Hsh155p1.000
SMX3Smx3p0.999
LSM4Lsm4p0.998
PRP46Prp46p0.998
PRP6Prp6p0.998
LSM3Lsm3p0.998
RRP6Rrp6p0.997
DHH1Dhh1p0.997
YSH1Ysh1p0.997
ISY1Isy1p0.996
PRP45Prp45p0.996
PRP11Prp11p0.996
PUB1Pub1p0.996
BUD13Bud13p0.995
SMX2Smx2p0.994
PRP2Prp2p0.992
PRP4Prp4p0.992
PRP9Prp9p0.992
PAB1Pab1p0.991
DCP2Dcp2p0.990
LSM2Lsm2p0.990
SLU7Slu7p0.990
PRP31Prp31p0.987
NPL3Npl3p0.987
PRP39Prp39p0.986
RPO21Rpo21p0.986
SKI7Ski7p0.986
SYF2Syf2p0.985
LSM8Lsm8p0.985
NAM7Nam7p0.985
KEM1Kem1p0.984
CCR4Ccr4p0.982
PRP3Prp3p0.981
MUD2Mud2p0.980
CBC2Cbc2p0.979
PRP43Prp43p0.978
SPT5Spt5p0.978
SME1Sme1p0.977
DEF1Def1p0.976
PAT1Pat1p0.974
POP1Pop1p0.973
PAP2Pap2p0.967
HPR1Hpr1p0.966
SNU66Snu66p0.962
RNA14Rna14p0.961
POP7Pop7p0.960
POP4Pop4p0.951
PFS2Pfs2p0.948
DED1Ded1p0.944
CDC39Cdc39p0.942
PCF11Pcf11p0.941
LSM7Lsm7p0.938
LUC7Luc7p0.936
BRR1Brr1p0.936
SPP381Spp381p0.934
MTR4Mtr4p0.931
RRP43Rrp43p0.929
PTA1Pta1p0.927
PAP1Pap1p0.926
CFT2Cft2p0.925
RRP45Rrp45p0.925
CAF40Caf40p0.923
PRP21Prp21p0.919
SPP382Spp382p0.916
CWC21Cwc21p0.913
RRP4Rrp4p0.911
POP5Pop5p0.911
MPE1Mpe1p0.910
YHC1Yhc1p0.909
IST3Ist3p0.895
DCP1Dcp1p0.888
SNP1Snp1p0.887
YJU2Yju2p0.886
IME4Ime4p0.883
NTC20Ntc20p0.879
NAB3Nab3p0.876
TIF4631Tif4631p0.872
SKI3Ski3p0.869
GBP2Gbp2p0.867
ECM2Ecm2p0.866
SNU23Snu23p0.847
FIP1Fip1p0.844
NOT5Not5p0.823