The network for 'regulation of nuclear transcribed mrna poly a tail shortening' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

regulation of nuclear transcribed mrna poly a tail shortening

Any process that modulates the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.

Drosophila melanogaster
NameDescriptionProbabilityFunc Analog Organism
spn-Espindle E0.442
stwlstonewall0.407
MntCG13316 gene product from transcript CG13316-RD0.269
hephhephaestus0.217
CycGCyclin G0.127
rhirhino0.112
CG8443CG8443 gene product from transcript CG8443-RA0.100
DadDaughters against dpp0.088
Pk61CProtein kinase 61C0.086
S6kRPS6-p70-protein kinase0.074
aubaubergine0.061
wunwunen0.052
piwiCG6122 gene product from transcript CG6122-RA0.045
HLH106Helix loop helix protein 1060.042
maelmaelstrom0.036
RhoGAP68FCG6811 gene product from transcript CG6811-RA0.036
zpgzero population growth0.034
armiarmitage0.033
Nipped-BCG17704 gene product from transcript CG17704-RI0.031
wispwispy0.030
mus309mutagen-sensitive 3090.030
Patr-1Protein associated with topo II related - 10.028
CG4771CG4771 gene product from transcript CG4771-RA0.026
Cul-3Cullin-30.026
MadMothers against dpp0.022
Hip14Huntingtin-interacting protein 140.022
spn-Dspindle D0.022
InRInsulin-like receptor0.021
swshort wing0.021
Fs(2)KetFemale sterile (2) Ketel0.019
CkIalphaCasein kinase Ialpha0.018
twstwins0.017
CG9925CG9925 gene product from transcript CG9925-RA0.017
bambag of marbles0.016
Hr39Hormone receptor-like in 390.016
PsaPuromycin sensitive aminopeptidase0.016
vasvasa0.016
krimpkrimper0.015
CG4699CG4699 gene product from transcript CG4699-RJ0.014
CG9238CG9238 gene product from transcript CG9238-RA0.014
piepineapple eye0.013
Npc1bNiemann-Pick type C-1b0.013
DlicDynein light intermediate chain0.012
scnyscrawny0.011
SAKSak kinase0.011
PRL-1CG4993 gene product from transcript CG4993-RB0.011
SmrSmrter0.010
RYBPRing and YY1 Binding Protein0.010
ns2nucleostemin 20.010
l(1)G0289lethal (1) G02890.010
HcfHost cell factor0.010
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Caenorhabditis elegans
NameDescriptionProbabilityFunc Analog Organism
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Danio rerio
NameDescriptionProbabilityFunc Analog Organism
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Homo sapiens
NameDescriptionProbabilityFunc Analog Organism
TOB1transducer of ERBB2, 11.000
TNRC6Atrinucleotide repeat containing 6A0.999
EIF2C1eukaryotic translation initiation factor 2C, 10.998
BTG1B-cell translocation gene 1, anti-proliferative0.991
PABPC1poly(A) binding protein, cytoplasmic 10.981
TNRC6Ctrinucleotide repeat containing 6C0.965
CNOT8CCR4-NOT transcription complex, subunit 80.939
EIF2C2eukaryotic translation initiation factor 2C, 20.877
EIF2C4eukaryotic translation initiation factor 2C, 40.869
CNOT7CCR4-NOT transcription complex, subunit 70.813
TNRC6Btrinucleotide repeat containing 6B0.781
DICER1dicer 1, ribonuclease type III0.745
PCBP2poly(rC) binding protein 20.708
CNOT1CCR4-NOT transcription complex, subunit 10.690
EIF2C3eukaryotic translation initiation factor 2C, 30.631
NOXA1NADPH oxidase activator 10.508
PAN3PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)0.364
BTG2BTG family, member 20.354
CNOT6CCR4-NOT transcription complex, subunit 60.323
CNOT6LCCR4-NOT transcription complex, subunit 6-like0.316
YBX1Y box binding protein 10.157
FOSFBJ murine osteosarcoma viral oncogene homolog0.128
IPO8importin 80.125
JUNBjun B proto-oncogene0.116
CPEB4cytoplasmic polyadenylation element binding protein 40.047
DUSP1dual specificity phosphatase 10.037
CNOT2CCR4-NOT transcription complex, subunit 20.034
PRKCZprotein kinase C, zeta0.027
IER2immediate early response 20.025
CPEB3cytoplasmic polyadenylation element binding protein 30.024
PARD6Apar-6 partitioning defective 6 homolog alpha (C. elegans)0.024
PARD3par-3 partitioning defective 3 homolog (C. elegans)0.022
FYNFYN oncogene related to SRC, FGR, YES0.022
PNRC1proline-rich nuclear receptor coactivator 10.021
NR4A2nuclear receptor subfamily 4, group A, member 20.021
FOSBFBJ murine osteosarcoma viral oncogene homolog B0.021
PARD6Bpar-6 partitioning defective 6 homolog beta (C. elegans)0.021
ZFP36zinc finger protein 36, C3H type, homolog (mouse)0.019
CEBPDCCAAT/enhancer binding protein (C/EBP), delta0.018
KLF6Kruppel-like factor 60.016
NCF1neutrophil cytosolic factor 10.014
CDCP1CUB domain containing protein 10.013
PAIP2poly(A) binding protein interacting protein 20.012
RAF1v-raf-1 murine leukemia viral oncogene homolog 10.011
MAPK14mitogen-activated protein kinase 140.011
MAPKAPK2mitogen-activated protein kinase-activated protein kinase 20.011
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Mus musculus
NameDescriptionProbabilityFunc Analog Organism
FosFBJ osteosarcoma oncogene0.929
Ddx6DEAD (Asp-Glu-Ala-Asp) box polypeptide 60.606
Eif2c2eukaryotic translation initiation factor 2C, 20.510
Dusp1dual specificity phosphatase 10.460
JunbJun-B oncogene0.379
Neurl1aneuralized homolog 1A (Drosophila)0.339
Ier2immediate early response 20.242
Brd4bromodomain containing 40.178
Tnrc6btrinucleotide repeat containing 6b0.162
Egr1early growth response 10.119
Nr4a1nuclear receptor subfamily 4, group A, member 10.116
Btg2B-cell translocation gene 2, anti-proliferative0.111
Bcl2l11BCL2-like 11 (apoptosis facilitator)0.109
Nfkbianuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha0.101
Trim32tripartite motif-containing 320.098
Pard3par-3 (partitioning defective 3) homolog (C. elegans)0.098
Mafkv-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)0.098
JunJun oncogene0.092
Btg1B-cell translocation gene 1, anti-proliferative0.092
Klf6Kruppel-like factor 60.084
Mll3myeloid/lymphoid or mixed-lineage leukemia 30.083
Gsk3bglycogen synthase kinase 3 beta0.079
Hsp90aa1heat shock protein 90, alpha (cytosolic), class A member 10.076
FasFas (TNF receptor superfamily member 6)0.074
Irs2insulin receptor substrate 20.066
Ldb3LIM domain binding 30.066
Prkceprotein kinase C, epsilon0.066
Vhlvon Hippel-Lindau tumor suppressor0.058
Cd28CD28 antigen0.052
Zfp36zinc finger protein 360.052
Tnfrsf13btumor necrosis factor receptor superfamily, member 13b0.050
Crim1cysteine rich transmembrane BMP regulator 1 (chordin like)0.047
CebpbCCAAT/enhancer binding protein (C/EBP), beta0.045
Klf7Kruppel-like factor 7 (ubiquitous)0.040
Mll5myeloid/lymphoid or mixed-lineage leukemia 50.039
Vegfavascular endothelial growth factor A0.039
Csrnp1cysteine-serine-rich nuclear protein 10.037
Ncoa1nuclear receptor coactivator 10.035
Bcl2B-cell leukemia/lymphoma 20.035
Klf4Kruppel-like factor 4 (gut)0.035
Bptfbromodomain PHD finger transcription factor0.035
Arpc4actin related protein 2/3 complex, subunit 40.034
Mapkap1mitogen-activated protein kinase associated protein 10.032
Ppp1r15aprotein phosphatase 1, regulatory (inhibitor) subunit 15A0.032
Ctdnep1CTD nuclear envelope phosphatase 10.031
Pabpc1poly(A) binding protein, cytoplasmic 10.031
Relav-rel reticuloendotheliosis viral oncogene homolog A (avian)0.030
Cd151CD151 antigen0.030
Ilkintegrin linked kinase0.030
Tomm40translocase of outer mitochondrial membrane 40 homolog (yeast)0.029
Tnrc6atrinucleotide repeat containing 6a0.028
Rhobras homolog gene family, member B0.028
Mcl1myeloid cell leukemia sequence 10.028
Wnk1WNK lysine deficient protein kinase 10.028
Sp1trans-acting transcription factor 10.027
RestRE1-silencing transcription factor0.026
D19Wsu162eDNA segment, Chr 19, Wayne State University 162, expressed0.026
Tnrc6ctrinucleotide repeat containing 6C0.025
Ptpn22protein tyrosine phosphatase, non-receptor type 22 (lymphoid)0.025
Midnmidnolin0.025
Tnfaip3tumor necrosis factor, alpha-induced protein 30.025
Akap9A kinase (PRKA) anchor protein (yotiao) 90.025
Maelmaelstrom homolog (Drosophila)0.024
Hivep1human immunodeficiency virus type I enhancer binding protein 10.024
Actn2actinin alpha 20.024
Bmpr2bone morphogenic protein receptor, type II (serine/threonine kinase)0.023
Synrgsynergin, gamma0.023
Phlpp1PH domain and leucine rich repeat protein phosphatase 10.023
Pum1pumilio 1 (Drosophila)0.023
Kif1bkinesin family member 1B0.023
Hsp90ab1heat shock protein 90 alpha (cytosolic), class B member 10.022
Errfi1ERBB receptor feedback inhibitor 10.022
Mapkapk2MAP kinase-activated protein kinase 20.022
Brd2bromodomain containing 20.022
Aff1AF4/FMR2 family, member 10.021
Nfkb1nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p1050.021
Per1period homolog 1 (Drosophila)0.021
Dyrk1adual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a0.021
BlnkB-cell linker0.020
Ighimmunoglobulin heavy chain complex0.020
Foxo1forkhead box O10.020
Mlf2myeloid leukemia factor 20.019
Pim3proviral integration site 30.019
Sp4trans-acting transcription factor 40.019
Mll1myeloid/lymphoid or mixed-lineage leukemia 10.019
ArhgdiaRho GDP dissociation inhibitor (GDI) alpha0.019
Mknk2MAP kinase-interacting serine/threonine kinase 20.019
Nphs2nephrosis 2 homolog, podocin (human)0.018
Nfkbiznuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta0.018
Galnt2UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 20.018
Crb2crumbs homolog 2 (Drosophila)0.018
Irf2bp2interferon regulatory factor 2 binding protein 20.018
Homer1homer homolog 1 (Drosophila)0.018
Dact3dapper homolog 3, antagonist of beta-catenin (xenopus)0.018
Pknox1Pbx/knotted 1 homeobox0.018
Gnb2l1guanine nucleotide binding protein (G protein), beta polypeptide 2 like 10.017
Ppargperoxisome proliferator activated receptor gamma0.017
Map3k5mitogen-activated protein kinase kinase kinase 50.017
Tgif1TGFB-induced factor homeobox 10.017
Agap3ArfGAP with GTPase domain, ankyrin repeat and PH domain 30.017
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Rattus norvegicus
NameDescriptionProbabilityFunc Analog Organism
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Saccharomyces cerevisiae
NameDescriptionProbabilityFunc Analog Organism