Process View
The network for 'rna phosphodiester bond hydrolysis endonucleolytic' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.
The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
EIF2C2 | eukaryotic translation initiation factor 2C, 2 | 0.606 | |
EIF2C1 | eukaryotic translation initiation factor 2C, 1 | 0.242 | |
EIF2C3 | eukaryotic translation initiation factor 2C, 3 | 0.136 | |
TNRC6A | trinucleotide repeat containing 6A | 0.095 | |
EIF2AK2 | eukaryotic translation initiation factor 2-alpha kinase 2 | 0.064 | |
PABPC1 | poly(A) binding protein, cytoplasmic 1 | 0.061 | |
FTSJ3 | FtsJ homolog 3 (E. coli) | 0.049 | |
EIF2C4 | eukaryotic translation initiation factor 2C, 4 | 0.045 | |
SYVN1 | synovial apoptosis inhibitor 1, synoviolin | 0.036 | |
TNRC6C | trinucleotide repeat containing 6C | 0.028 | |
TNRC6B | trinucleotide repeat containing 6B | 0.022 | |
RPP40 | ribonuclease P/MRP 40kDa subunit | 0.021 | |
DICER1 | dicer 1, ribonuclease type III | 0.020 | |
TGS1 | trimethylguanosine synthase 1 | 0.019 | |
NUFIP1 | nuclear fragile X mental retardation protein interacting protein 1 | 0.015 | |
UPF1 | UPF1 regulator of nonsense transcripts homolog (yeast) | 0.015 | |
C10orf2 | chromosome 10 open reading frame 2 | 0.012 | |
BMS1 | BMS1 homolog, ribosome assembly protein (yeast) | 0.012 | |
CHAF1A | chromatin assembly factor 1, subunit A (p150) | 0.011 | |
PPAN | peter pan homolog (Drosophila) | 0.011 | |
IPO8 | importin 8 | 0.011 | |
TARBP2 | TAR (HIV-1) RNA binding protein 2 | 0.010 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
Ddx60 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 | 0.721 | |
Dicer1 | Dicer1, Dcr-1 homolog (Drosophila) | 0.462 | |
Mybbp1a | MYB binding protein (P160) 1a | 0.309 | |
Grwd1 | glutamate-rich WD repeat containing 1 | 0.224 | |
Noc4l | nucleolar complex associated 4 homolog (S. cerevisiae) | 0.178 | |
Nop2 | NOP2 nucleolar protein homolog (yeast) | 0.165 | |
Trim32 | tripartite motif-containing 32 | 0.161 | |
Eed | embryonic ectoderm development | 0.159 | |
Smad4 | MAD homolog 4 (Drosophila) | 0.149 | |
Ppan | peter pan homolog (Drosophila) | 0.134 | |
Ddx6 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 | 0.114 | |
Pwp2 | PWP2 periodic tryptophan protein homolog (yeast) | 0.109 | |
Atr | ataxia telangiectasia and Rad3 related | 0.106 | |
Gnl3 | guanine nucleotide binding protein-like 3 (nucleolar) | 0.079 | |
Pprc1 | peroxisome proliferative activated receptor, gamma, coactivator-related 1 | 0.073 | |
Fam203a | family with sequence similarity 203, member A | 0.065 | |
Utp20 | UTP20, small subunit (SSU) processome component, homolog (yeast) | 0.054 | |
Smyd5 | SET and MYND domain containing 5 | 0.053 | |
Wdr43 | WD repeat domain 43 | 0.051 | |
Rrp12 | ribosomal RNA processing 12 homolog (S. cerevisiae) | 0.050 | |
Ftsj3 | FtsJ homolog 3 (E. coli) | 0.049 | |
Trim25 | tripartite motif-containing 25 | 0.047 | |
Tex10 | testis expressed gene 10 | 0.043 | |
Nubp1 | nucleotide binding protein 1 | 0.041 | |
Tnrc6c | trinucleotide repeat containing 6C | 0.040 | |
Nolc1 | nucleolar and coiled-body phosphoprotein 1 | 0.036 | |
Ddx21 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 | 0.035 | |
Pus1 | pseudouridine synthase 1 | 0.033 | |
Rrp1b | ribosomal RNA processing 1 homolog B (S. cerevisiae) | 0.033 | |
Pdcd11 | programmed cell death 11 | 0.032 | |
Prkdc | protein kinase, DNA activated, catalytic polypeptide | 0.029 | |
Ifit1 | interferon-induced protein with tetratricopeptide repeats 1 | 0.028 | |
Rrs1 | RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) | 0.028 | |
Dph2 | DPH2 homolog (S. cerevisiae) | 0.027 | |
Rbm34 | RNA binding motif protein 34 | 0.027 | |
Heatr1 | HEAT repeat containing 1 | 0.027 | |
Ccdc86 | coiled-coil domain containing 86 | 0.026 | |
Eftud2 | elongation factor Tu GTP binding domain containing 2 | 0.025 | |
Akap9 | A kinase (PRKA) anchor protein (yotiao) 9 | 0.024 | |
Rrp15 | ribosomal RNA processing 15 homolog (S. cerevisiae) | 0.024 | |
Tbrg4 | transforming growth factor beta regulated gene 4 | 0.024 | |
Elac2 | elaC homolog 2 (E. coli) | 0.024 | |
Tcrd | T-cell receptor delta chain | 0.023 | |
Nop56 | NOP56 ribonucleoprotein homolog (yeast) | 0.023 | |
Gar1 | GAR1 ribonucleoprotein homolog (yeast) | 0.023 | |
Polr1b | polymerase (RNA) I polypeptide B | 0.022 | |
Srm | spermidine synthase | 0.022 | |
Polr3a | polymerase (RNA) III (DNA directed) polypeptide A | 0.021 | |
Nufip1 | nuclear fragile X mental retardation protein interacting protein 1 | 0.021 | |
Wdr3 | WD repeat domain 3 | 0.021 | |
Tcrb | T-cell receptor beta chain | 0.020 | |
Rbm19 | RNA binding motif protein 19 | 0.020 | |
Drosha | drosha, ribonuclease type III | 0.019 | |
Safb | scaffold attachment factor B | 0.019 | |
Bcl2l11 | BCL2-like 11 (apoptosis facilitator) | 0.019 | |
Dis3 | DIS3 mitotic control homolog (S. cerevisiae) | 0.019 | |
Xpo5 | exportin 5 | 0.018 | |
Rtp4 | receptor transporter protein 4 | 0.018 | |
Pus7l | pseudouridylate synthase 7 homolog (S. cerevisiae)-like | 0.018 | |
Yrdc | yrdC domain containing (E.coli) | 0.018 | |
Mogs | mannosyl-oligosaccharide glucosidase | 0.018 | |
2610027L16Rik | RIKEN cDNA 2610027L16 gene | 0.018 | |
Ddx51 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 | 0.018 | |
Apc | adenomatosis polyposis coli | 0.017 | |
Dkc1 | dyskeratosis congenita 1, dyskerin homolog (human) | 0.017 | |
Usp18 | ubiquitin specific peptidase 18 | 0.017 | |
Nsun5 | NOL1/NOP2/Sun domain family, member 5 | 0.016 | |
Ikzf1 | IKAROS family zinc finger 1 | 0.016 | |
Foxp3 | forkhead box P3 | 0.016 | |
D19Bwg1357e | DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed | 0.016 | |
Igh | immunoglobulin heavy chain complex | 0.016 | |
Bysl | bystin-like | 0.016 | |
Ercc3 | excision repair cross-complementing rodent repair deficiency, complementation group 3 | 0.015 | |
Ddx20 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 | 0.015 | |
Taf5l | TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor | 0.015 | |
Nsun2 | NOL1/NOP2/Sun domain family member 2 | 0.015 | |
Imp4 | IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) | 0.015 | |
Oasl2 | 2'-5' oligoadenylate synthetase-like 2 | 0.014 | |
Aen | apoptosis enhancing nuclease | 0.014 | |
Ddx39 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 | 0.014 | |
Mettl1 | methyltransferase like 1 | 0.014 | |
Tnrc6b | trinucleotide repeat containing 6b | 0.014 | |
Rcl1 | RNA terminal phosphate cyclase-like 1 | 0.014 | |
Rfc2 | replication factor C (activator 1) 2 | 0.014 | |
Pdcd2 | programmed cell death 2 | 0.014 | |
Tsr1 | TSR1, 20S rRNA accumulation, homolog (yeast) | 0.014 | |
Nip7 | nuclear import 7 homolog (S. cerevisiae) | 0.013 | |
Ipo4 | importin 4 | 0.013 | |
Oas1a | 2'-5' oligoadenylate synthetase 1A | 0.013 | |
Dcaf13 | DDB1 and CUL4 associated factor 13 | 0.013 | |
Ifi44 | interferon-induced protein 44 | 0.013 | |
1810008A18Rik | RIKEN cDNA 1810008A18 gene | 0.013 | |
Isg20l2 | interferon stimulated exonuclease gene 20-like 2 | 0.013 | |
Ccz1 | CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae) | 0.012 | |
Isg15 | ISG15 ubiquitin-like modifier | 0.012 | |
Ptpn11 | protein tyrosine phosphatase, non-receptor type 11 | 0.012 | |
Cad | carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase | 0.012 | |
Chd4 | chromodomain helicase DNA binding protein 4 | 0.012 | |
Wdr46 | WD repeat domain 46 | 0.012 | |
Irf7 | interferon regulatory factor 7 | 0.012 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
ECM16 | Ecm16p | 0.796 | |
ENP1 | Enp1p | 0.775 | |
BFR2 | Bfr2p | 0.748 | |
SOF1 | Sof1p | 0.733 | |
FAF1 | Faf1p | 0.693 | |
UTP18 | Utp18p | 0.638 | |
CBF5 | Cbf5p | 0.589 | |
NOP14 | Nop14p | 0.512 | |
DBP7 | Dbp7p | 0.503 | |
UTP11 | Utp11p | 0.499 | |
DIP2 | Dip2p | 0.469 | |
KRR1 | Krr1p | 0.441 | |
UTP8 | Utp8p | 0.420 | |
UTP25 | Utp25p | 0.417 | |
MRD1 | Mrd1p | 0.390 | |
SLX9 | Slx9p | 0.377 | |
MPP10 | Mpp10p | 0.317 | |
IMP3 | Imp3p | 0.295 | |
NOC2 | Noc2p | 0.292 | |
UTP10 | Utp10p | 0.292 | |
UTP4 | Utp4p | 0.292 | |
UTP23 | Utp23p | 0.246 | |
NOB1 | Nob1p | 0.245 | |
UTP30 | Utp30p | 0.243 | |
RRP14 | Rrp14p | 0.236 | |
ENP2 | Enp2p | 0.231 | |
UTP21 | Utp21p | 0.223 | |
BUD21 | Bud21p | 0.204 | |
GAR1 | Gar1p | 0.203 | |
RPS21A | Rps21ap | 0.202 | |
RPS4A | Rps4ap | 0.176 | |
IMP4 | Imp4p | 0.176 | |
NAN1 | Nan1p | 0.168 | |
TRM112 | Trm112p | 0.165 | |
NUC1 | Nuc1p | 0.157 | |
RIX1 | Rix1p | 0.144 | |
BMS1 | Bms1p | 0.140 | |
RRP3 | Rrp3p | 0.139 | |
EFG1 | Efg1p | 0.136 | |
NSA2 | Nsa2p | 0.134 | |
RPS28B | Rps28bp | 0.131 | |
SGD1 | Sgd1p | 0.131 | |
NOP1 | Nop1p | 0.128 | |
NOC4 | Noc4p | 0.121 | |
RPS29A | Rps29ap | 0.113 | |
UBP10 | Ubp10p | 0.108 | |
FYV7 | Fyv7p | 0.105 | |
LRP1 | Lrp1p | 0.104 | |
RRN3 | Rrn3p | 0.102 | |
ESF2 | Esf2p | 0.100 | |
EBP2 | Ebp2p | 0.099 | |
UTP14 | Utp14p | 0.097 | |
PRS2 | Prs2p | 0.096 | |
RPS17A | Rps17ap | 0.095 | |
RIX7 | Rix7p | 0.093 | |
BCD1 | Bcd1p | 0.092 | |
RPS18B | Rps18bp | 0.091 | |
PWP2 | Pwp2p | 0.091 | |
NOP10 | Nop10p | 0.089 | |
UTP13 | Utp13p | 0.085 | |
NOP6 | Nop6p | 0.085 | |
RRN7 | Rrn7p | 0.082 | |
KRE33 | Kre33p | 0.081 | |
UTP20 | Utp20p | 0.080 | |
RET1 | Ret1p | 0.079 | |
MPE1 | Mpe1p | 0.077 | |
RNH203 | Rnh203p | 0.073 | |
UTP15 | Utp15p | 0.071 | |
DRS1 | Drs1p | 0.071 | |
PXR1 | Pxr1p | 0.069 | |
PNO1 | Pno1p | 0.069 | |
RPL22A | Rpl22ap | 0.067 | |
ROK1 | Rok1p | 0.067 | |
GRC3 | Grc3p | 0.065 | |
RPS30A | Rps30ap | 0.065 | |
RIO1 | Rio1p | 0.065 | |
CMS1 | Cms1p | 0.062 | |
NUP82 | Nup82p | 0.062 | |
RRP36 | Rrp36p | 0.062 | |
POL30 | Pol30p | 0.061 | |
RLP7 | Rlp7p | 0.061 | |
UAF30 | Uaf30p | 0.060 | |
NAF1 | Naf1p | 0.060 | |
YHB1 | Yhb1p | 0.060 | |
PRS1 | Prs1p | 0.059 | |
EMG1 | Emg1p | 0.058 | |
TRL1 | Trl1p | 0.058 | |
UTP5 | Utp5p | 0.056 | |
RRP7 | Rrp7p | 0.055 | |
DHR2 | Dhr2p | 0.055 | |
UTP9 | Utp9p | 0.055 | |
NUP85 | Nup85p | 0.055 | |
YJR129C | hypothetical protein | 0.055 | |
NUP157 | Nup157p | 0.052 | |
RPL23B | Rpl23bp | 0.052 | |
SRD1 | Srd1p | 0.052 | |
TMA23 | Tma23p | 0.051 | |
MTR3 | Mtr3p | 0.051 | |
CCT8 | Cct8p | 0.051 | |
CUP1-1 | Cup1-1p | 0.050 |