The network for 'dsdna loop formation' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

dsdna loop formation

The formation and maintenance of DNA loops that juxtapose separated regions on the same dsDNA molecule.

NameDescriptionProbabilityFunc Analog Organism
SRSF1serine/arginine-rich splicing factor 10.040
ABCE1ATP-binding cassette, sub-family E (OABP), member 10.038
C1QBPcomplement component 1, q subcomponent binding protein0.025
SNRPD1small nuclear ribonucleoprotein D1 polypeptide 16kDa0.024
USP1ubiquitin specific peptidase 10.019
UBCubiquitin C0.018
NUP107nucleoporin 107kDa0.015
CSE1LCSE1 chromosome segregation 1-like (yeast)0.015
MSH2mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)0.014
UCHL5ubiquitin carboxyl-terminal hydrolase L50.014
CCT2chaperonin containing TCP1, subunit 2 (beta)0.013
NOL11nucleolar protein 110.012
DDX18DEAD (Asp-Glu-Ala-Asp) box polypeptide 180.012
BUB3budding uninhibited by benzimidazoles 3 homolog (yeast)0.011
PAICSphosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase0.011
SERBP1SERPINE1 mRNA binding protein 10.011
CCT6Achaperonin containing TCP1, subunit 6A (zeta 1)0.011
CAND1cullin-associated and neddylation-dissociated 10.011
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Caenorhabditis elegans
NameDescriptionProbabilityFunc Analog Organism
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Danio rerio
NameDescriptionProbabilityFunc Analog Organism
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Drosophila melanogaster
NameDescriptionProbabilityFunc Analog Organism
EcREcdysone receptor0.010
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Mus musculus
NameDescriptionProbabilityFunc Analog Organism
Gata4GATA binding protein 40.767
Rxraretinoid X receptor alpha0.724
Nkx2-5NK2 transcription factor related, locus 5 (Drosophila)0.722
Gata5GATA binding protein 50.474
Gata6GATA binding protein 60.269
Jag1jagged 10.177
Zfpm2zinc finger protein, multitype 20.171
Klf3Kruppel-like factor 3 (basic)0.123
Hey2hairy/enhancer-of-split related with YRPW motif 20.088
Ntf3neurotrophin 30.087
Tal1T-cell acute lymphocytic leukemia 10.060
Pitx2paired-like homeodomain transcription factor 20.058
Kcnq1potassium voltage-gated channel, subfamily Q, member 10.047
Ruvbl1RuvB-like protein 10.047
Tbx3T-box 30.039
Tgfb2transforming growth factor, beta 20.039
Smad6MAD homolog 6 (Drosophila)0.034
Gab2growth factor receptor bound protein 2-associated protein 20.032
Hoxa1homeobox A10.031
Notch1Notch gene homolog 1 (Drosophila)0.029
Ptpn11protein tyrosine phosphatase, non-receptor type 110.027
Pparaperoxisome proliferator activated receptor alpha0.024
Vegfavascular endothelial growth factor A0.024
Tead3TEA domain family member 30.024
P2rx1purinergic receptor P2X, ligand-gated ion channel, 10.024
Ptpn14protein tyrosine phosphatase, non-receptor type 140.024
Cited2Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 20.020
Gfi1bgrowth factor independent 1B0.020
Slc4a1solute carrier family 4 (anion exchanger), member 10.017
NynrinNYN domain and retroviral integrase containing0.016
Foxf1aforkhead box F1a0.016
Mesp1mesoderm posterior 10.015
Snai1snail homolog 1 (Drosophila)0.015
Myo6myosin VI0.015
Carm1coactivator-associated arginine methyltransferase 10.014
Mybmyeloblastosis oncogene0.014
Hhexhematopoietically expressed homeobox0.014
Slc38a5solute carrier family 38, member 50.014
Six5sine oculis-related homeobox 5 homolog (Drosophila)0.013
S1pr2sphingosine-1-phosphate receptor 20.012
Pax2paired box gene 20.012
Bnc1basonuclin 10.012
Fgf8fibroblast growth factor 80.012
Tbx2T-box 20.012
Plxna1plexin A10.011
Hey1hairy/enhancer-of-split related with YRPW motif 10.011
Pcsk5proprotein convertase subtilisin/kexin type 50.011
Sox7SRY-box containing gene 70.011
Dll1delta-like 1 (Drosophila)0.010
Efnb1ephrin B10.010
Vps72vacuolar protein sorting 72 (yeast)0.010
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Rattus norvegicus
NameDescriptionProbabilityFunc Analog Organism
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Saccharomyces cerevisiae
NameDescriptionProbabilityFunc Analog Organism