Process View
The network for 'positive regulation of rna splicing' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.
Any process that activates or increases the frequency, rate or extent of RNA splicing.
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
Ywhae | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide | 0.828 | |
Srsf9 | serine/arginine-rich splicing factor 9 | 0.514 | |
Ewsr1 | Ewing sarcoma breakpoint region 1 | 0.471 | |
Ptma | prothymosin alpha | 0.465 | |
Fus | fusion, derived from t(12;16) malignant liposarcoma (human) | 0.344 | |
Srsf2 | serine/arginine-rich splicing factor 2 | 0.303 | |
Pcbp1 | poly(rC) binding protein 1 | 0.273 | |
Tcerg1 | transcription elongation regulator 1 (CA150) | 0.172 | |
Srsf3 | serine/arginine-rich splicing factor 3 | 0.153 | |
Prmt1 | protein arginine N-methyltransferase 1 | 0.149 | |
Rbbp7 | retinoblastoma binding protein 7 | 0.147 | |
Hsp90ab1 | heat shock protein 90 alpha (cytosolic), class B member 1 | 0.138 | |
Hnrpdl | heterogeneous nuclear ribonucleoprotein D-like | 0.125 | |
Anp32b | acidic (leucine-rich) nuclear phosphoprotein 32 family, member B | 0.125 | |
Ncl | nucleolin | 0.103 | |
Hnrnpa3 | heterogeneous nuclear ribonucleoprotein A3 | 0.102 | |
Hnrnpa1 | heterogeneous nuclear ribonucleoprotein A1 | 0.092 | |
Hnrnpk | heterogeneous nuclear ribonucleoprotein K | 0.088 | |
2500003M10Rik | RIKEN cDNA 2500003M10 gene | 0.087 | |
Rnps1 | ribonucleic acid binding protein S1 | 0.082 | |
Khdrbs1 | KH domain containing, RNA binding, signal transduction associated 1 | 0.078 | |
Hsp90aa1 | heat shock protein 90, alpha (cytosolic), class A member 1 | 0.072 | |
Hmx3 | H6 homeobox 3 | 0.070 | |
Sf3a2 | splicing factor 3a, subunit 2 | 0.070 | |
Npm1 | nucleophosmin 1 | 0.068 | |
Rbm8a | RNA binding motif protein 8a | 0.064 | |
Hnrnpd | heterogeneous nuclear ribonucleoprotein D | 0.062 | |
Hmgn1 | high mobility group nucleosomal binding domain 1 | 0.057 | |
Hnrnpa0 | heterogeneous nuclear ribonucleoprotein A0 | 0.052 | |
Ddx39b | DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B | 0.045 | |
Hnrnpa2b1 | heterogeneous nuclear ribonucleoprotein A2/B1 | 0.043 | |
Dhx9 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 | 0.040 | |
Mrfap1 | Morf4 family associated protein 1 | 0.037 | |
Srsf7 | serine/arginine-rich splicing factor 7 | 0.037 | |
Thoc4 | THO complex 4 | 0.035 | |
Hnrnpm | heterogeneous nuclear ribonucleoprotein M | 0.035 | |
Nap1l1 | nucleosome assembly protein 1-like 1 | 0.035 | |
Hoxa1 | homeobox A1 | 0.034 | |
Sfpq | splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) | 0.033 | |
Jag1 | jagged 1 | 0.033 | |
Ctbp1 | C-terminal binding protein 1 | 0.031 | |
Srsf6 | serine/arginine-rich splicing factor 6 | 0.031 | |
Impdh2 | inosine 5'-phosphate dehydrogenase 2 | 0.030 | |
Uba2 | ubiquitin-like modifier activating enzyme 2 | 0.030 | |
Set | SET nuclear oncogene | 0.030 | |
Ppp1cc | protein phosphatase 1, catalytic subunit, gamma isoform | 0.027 | |
Pax2 | paired box gene 2 | 0.027 | |
Anp32e | acidic (leucine-rich) nuclear phosphoprotein 32 family, member E | 0.026 | |
Rpgrip1l | Rpgrip1-like | 0.025 | |
Trim28 | tripartite motif-containing 28 | 0.024 | |
Ube2n | ubiquitin-conjugating enzyme E2N | 0.024 | |
Srsf1 | serine/arginine-rich splicing factor 1 | 0.023 | |
Hnrnph1 | heterogeneous nuclear ribonucleoprotein H1 | 0.023 | |
Syncrip | synaptotagmin binding, cytoplasmic RNA interacting protein | 0.023 | |
Pabpn1 | poly(A) binding protein, nuclear 1 | 0.021 | |
Nphp4 | nephronophthisis 4 (juvenile) homolog (human) | 0.021 | |
Enoph1 | enolase-phosphatase 1 | 0.021 | |
Foxg1 | forkhead box G1 | 0.021 | |
Tdg | thymine DNA glycosylase | 0.020 | |
2410002F23Rik | RIKEN cDNA 2410002F23 gene | 0.019 | |
Tardbp | TAR DNA binding protein | 0.019 | |
Tbx10 | T-box 10 | 0.019 | |
Ran | RAN, member RAS oncogene family | 0.019 | |
Tmed9 | transmembrane emp24 protein transport domain containing 9 | 0.019 | |
Tbx1 | T-box 1 | 0.016 | |
U2af1 | U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 | 0.016 | |
Hnrnpf | heterogeneous nuclear ribonucleoprotein F | 0.016 | |
Axin1 | axin 1 | 0.015 | |
Hsph1 | heat shock 105kDa/110kDa protein 1 | 0.015 | |
Nono | non-POU-domain-containing, octamer binding protein | 0.015 | |
Ssrp1 | structure specific recognition protein 1 | 0.015 | |
Psmc5 | protease (prosome, macropain) 26S subunit, ATPase 5 | 0.014 | |
Ahi1 | Abelson helper integration site 1 | 0.014 | |
Fgf10 | fibroblast growth factor 10 | 0.014 | |
Cct2 | chaperonin containing Tcp1, subunit 2 (beta) | 0.014 | |
Srrm4 | serine/arginine repetitive matrix 4 | 0.014 | |
Cdk2ap1 | CDK2 (cyclin-dependent kinase 2)-associated protein 1 | 0.014 | |
Pnn | pinin | 0.014 | |
Ppp2ca | protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform | 0.014 | |
Hmx2 | H6 homeobox 2 | 0.013 | |
Cdk9 | cyclin-dependent kinase 9 (CDC2-related kinase) | 0.013 | |
Chd7 | chromodomain helicase DNA binding protein 7 | 0.013 | |
Eif4h | eukaryotic translation initiation factor 4H | 0.013 | |
Snrpb | small nuclear ribonucleoprotein B | 0.013 | |
Erh | enhancer of rudimentary homolog (Drosophila) | 0.013 | |
Kcne1 | potassium voltage-gated channel, Isk-related subfamily, member 1 | 0.013 | |
Cbfb | core binding factor beta | 0.012 | |
Cnot3 | CCR4-NOT transcription complex, subunit 3 | 0.012 | |
Srsf11 | serine/arginine-rich splicing factor 11 | 0.012 | |
Msi1 | Musashi homolog 1(Drosophila) | 0.012 | |
Safb | scaffold attachment factor B | 0.012 | |
Pcna | proliferating cell nuclear antigen | 0.012 | |
Cbx3 | chromobox homolog 3 (Drosophila HP1 gamma) | 0.011 | |
Rbm3 | RNA binding motif protein 3 | 0.011 | |
Cct3 | chaperonin containing Tcp1, subunit 3 (gamma) | 0.011 | |
Ctdp1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 | 0.011 | |
Ube2e3 | ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast) | 0.011 | |
Psmc4 | proteasome (prosome, macropain) 26S subunit, ATPase, 4 | 0.011 | |
Dscaml1 | Down syndrome cell adhesion molecule-like 1 | 0.011 | |
Prpf38a | PRP38 pre-mRNA processing factor 38 (yeast) domain containing A | 0.011 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
nvl | nuclear VCP-like | 0.091 | |
sf3a2 | splicing factor 3a, subunit 2 | 0.089 | |
rbb4l | retinoblastoma binding protein 4, like | 0.085 | |
srsf6a | serine/arginine-rich splicing factor 6a | 0.063 | |
ddx39aa | DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa | 0.058 | |
ilf2 | interleukin enhancer binding factor 2 | 0.055 | |
eftud2 | elongation factor Tu GTP binding domain containing 2 | 0.046 | |
dcaf13 | ddb1 and cul4 associated factor 13 | 0.044 | |
utp15 | utp15, U3 small nucleolar ribonucleoprotein, homolog | 0.040 | |
bub3 | BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) | 0.039 | |
rnps1 | RNA binding protein S1, serine-rich domain | 0.037 | |
ddx39b | DEAD (Asp-Glu-Ala-Asp) box polypeptide 39b | 0.032 | |
cbx1a | chromobox homolog 1a (HP1 beta homolog Drosophila) | 0.031 | |
snrnp40 | small nuclear ribonucleoprotein 40 (U5) | 0.031 | |
puf60b | poly-U binding splicing factor b | 0.031 | |
im:7148292 | im:7148292 | 0.030 | |
sumo3a | SMT3 suppressor of mif two 3 homolog 3a | 0.030 | |
zgc:55259 | zgc:55259 | 0.030 | |
hnrnpm | heterogeneous nuclear ribonucleoprotein M | 0.029 | |
cstf1 | cleavage stimulation factor, 3' pre-RNA, subunit 1 | 0.029 | |
nup93 | nucleoporin 93 | 0.028 | |
prpf39 | PRP39 pre-mRNA processing factor 39 homolog (yeast) | 0.026 | |
nup50 | nucleoporin 50 | 0.025 | |
zgc:77052 | zgc:77052 | 0.024 | |
thoc1 | THO complex 1 | 0.024 | |
setb | SET translocation (myeloid leukemia-associated) B | 0.024 | |
cdk8 | cyclin-dependent kinase 8 | 0.023 | |
ilf3a | interleukin enhancer binding factor 3a | 0.021 | |
si:dkey-6e12.4 | si:dkey-6e12.4 | 0.020 | |
safb | scaffold attachment factor B | 0.019 | |
ppp2cb | protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform | 0.019 | |
snrpc | small nuclear ribonucleoprotein polypeptide C | 0.019 | |
smu1 | smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) | 0.019 | |
matr3l | matrin 3-like | 0.018 | |
hspa4a | heat shock protein 4a | 0.018 | |
zgc:56148 | zgc:56148 | 0.017 | |
esf1 | ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) | 0.017 | |
snrpd3l | small nuclear ribonucleoprotein D3 polypeptide, like | 0.017 | |
prpf8 | pre-mRNA processing factor 8 | 0.015 | |
cherp | calcium homeostasis endoplasmic reticulum protein | 0.015 | |
xab2 | XPA binding protein 2 | 0.015 | |
mrps31 | mitochondrial ribosomal protein S31 | 0.015 | |
srrt | serrate RNA effector molecule homolog (Arabidopsis) | 0.014 | |
zgc:101598 | zgc:101598 | 0.014 | |
sae1 | SUMO1 activating enzyme subunit 1 | 0.014 | |
c1orf109 | c1orf109 homolog (H. sapiens) | 0.014 | |
zgc:109901 | zgc:109901 | 0.013 | |
exosc2 | exosome component 2 | 0.013 | |
zgc:55695 | zgc:55695 | 0.013 | |
htatsf1 | HIV TAT specific factor 1 | 0.013 | |
cpsf2 | cleavage and polyadenylation specific factor 2 | 0.012 | |
senp3a | SUMO1/sentrin/SMT3 specific peptidase 3a | 0.012 | |
apex1 | APEX nuclease (multifunctional DNA repair enzyme) 1 | 0.012 | |
imp3 | IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) | 0.012 | |
nudc | nuclear distribution gene C homolog | 0.012 | |
c20orf14 | c20orf14 homolog (H. sapiens) | 0.012 | |
ppwd1 | peptidylprolyl isomerase domain and WD repeat containing 1 | 0.012 | |
riok2 | RIO kinase 2 (yeast) | 0.012 | |
ppig | peptidyl-prolyl isomerase G (cyclophilin G) | 0.012 | |
zgc:86598 | zgc:86598 | 0.012 | |
hnrnph1l | heterogeneous nuclear ribonucleoprotein H1, like | 0.012 | |
cdc23 | CDC23 (cell division cycle 23, yeast, homolog) | 0.011 | |
zgc:136773 | zgc:136773 | 0.011 | |
tra2a | transformer-2 alpha | 0.011 | |
top1mt | mitochondrial topoisomerase I | 0.011 | |
nup88 | nucleoporin 88 | 0.011 | |
gabpb2a | GA repeat binding protein, beta 2a | 0.011 | |
prp19 | PRP19/PSO4 homolog (S. cerevisiae) | 0.011 | |
nol10 | nucleolar protein 10 | 0.011 | |
utp11l | UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) | 0.011 | |
drg1 | developmentally regulated GTP binding protein 1 | 0.010 | |
smarca5 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 | 0.010 | |
ctnnbl1 | catenin, beta like 1 | 0.010 | |
mrpl9 | mitochondrial ribosomal protein L9 | 0.010 | |
smarcb1b | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b | 0.010 | |
cpsf6 | cleavage and polyadenylation specific factor 6 | 0.010 | |
psmc6 | proteasome (prosome, macropain) 26S subunit, ATPase, 6 | 0.010 | |
ddx54 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 | 0.010 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
MAGOH | mago-nashi homolog, proliferation-associated (Drosophila) | 0.086 | |
SF1 | splicing factor 1 | 0.081 | |
RNPS1 | RNA binding protein S1, serine-rich domain | 0.067 | |
EIF4A3 | eukaryotic translation initiation factor 4A3 | 0.025 | |
HNRNPM | heterogeneous nuclear ribonucleoprotein M | 0.022 | |
HNRNPH3 | heterogeneous nuclear ribonucleoprotein H3 (2H9) | 0.016 | |
IK | IK cytokine, down-regulator of HLA II | 0.015 | |
SRRM1 | serine/arginine repetitive matrix 1 | 0.015 | |
BCAS2 | breast carcinoma amplified sequence 2 | 0.014 | |
HNRNPC | heterogeneous nuclear ribonucleoprotein C (C1/C2) | 0.014 | |
ZNF830 | zinc finger protein 830 | 0.013 | |
PCBP1 | poly(rC) binding protein 1 | 0.012 | |
HNRNPH1 | heterogeneous nuclear ribonucleoprotein H1 (H) | 0.011 | |
YTHDC1 | YTH domain containing 1 | 0.011 | |
SF3A1 | splicing factor 3a, subunit 1, 120kDa | 0.011 | |
HNRNPF | heterogeneous nuclear ribonucleoprotein F | 0.011 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
SSA1 | Ssa1p | 0.068 | |
SSA4 | Ssa4p | 0.055 | |
STI1 | Sti1p | 0.029 | |
SPT5 | Spt5p | 0.023 | |
SSA3 | Ssa3p | 0.020 | |
BTN2 | Btn2p | 0.019 | |
SSA2 | Ssa2p | 0.017 | |
KAR2 | Kar2p | 0.017 | |
RPB2 | Rpb2p | 0.016 | |
CPR6 | Cpr6p | 0.014 | |
MPT5 | Mpt5p | 0.014 | |
SRD1 | Srd1p | 0.014 | |
LUC7 | Luc7p | 0.013 | |
HBT1 | Hbt1p | 0.013 | |
SIS1 | Sis1p | 0.013 | |
ZPR1 | Zpr1p | 0.012 | |
YLR264C-A | hypothetical protein | 0.012 | |
ARG8 | Arg8p | 0.012 | |
PMA2 | Pma2p | 0.012 | |
LEU2 | Leu2p | 0.012 | |
ARP10 | Arp10p | 0.012 | |
YGR079W | hypothetical protein | 0.012 | |
YLR162W | hypothetical protein | 0.011 | |
URA3 | Ura3p | 0.011 | |
YOL038C-A | hypothetical protein | 0.011 | |
GYL1 | Gyl1p | 0.011 | |
MPP10 | Mpp10p | 0.011 | |
MER1 | Mer1p | 0.011 | |
HO | Hop | 0.011 | |
YHL008C | hypothetical protein | 0.011 | |
ATP6 | Atp6p | 0.011 | |
AZF1 | Azf1p | 0.011 | |
FAS2 | Fas2p | 0.011 | |
ICS2 | Ics2p | 0.010 | |
PBP1 | Pbp1p | 0.010 | |
CUP1-1 | Cup1-1p | 0.010 | |
HPF1 | Hpf1p | 0.010 | |
YAR068W | hypothetical protein | 0.010 | |
YIL151C | hypothetical protein | 0.010 | |
HXT3 | Hxt3p | 0.010 | |
YBR013C | hypothetical protein | 0.010 | |
CAM1 | Cam1p | 0.010 |