Process View
The network for 'rna dependent dna replication' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.
A DNA replication process that uses RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strands.
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
Chordc1 | cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 | 0.827 | |
Timeless | timeless homolog (Drosophila) | 0.800 | |
Trp53 | transformation related protein 53 | 0.795 | |
Prim1 | DNA primase, p49 subunit | 0.630 | |
Hsp90aa1 | heat shock protein 90, alpha (cytosolic), class A member 1 | 0.447 | |
Nap1l1 | nucleosome assembly protein 1-like 1 | 0.393 | |
Mcm4 | minichromosome maintenance deficient 4 homolog (S. cerevisiae) | 0.291 | |
Mcm2 | minichromosome maintenance deficient 2 mitotin (S. cerevisiae) | 0.247 | |
Mcm7 | minichromosome maintenance deficient 7 (S. cerevisiae) | 0.209 | |
Prim2 | DNA primase, p58 subunit | 0.202 | |
Rfc1 | replication factor C (activator 1) 1 | 0.194 | |
Nup85 | nucleoporin 85 | 0.184 | |
Ezh2 | enhancer of zeste homolog 2 (Drosophila) | 0.168 | |
Hspa8 | heat shock protein 8 | 0.158 | |
Stip1 | stress-induced phosphoprotein 1 | 0.123 | |
Hsph1 | heat shock 105kDa/110kDa protein 1 | 0.115 | |
Rrm1 | ribonucleotide reductase M1 | 0.111 | |
Mcm3 | minichromosome maintenance deficient 3 (S. cerevisiae) | 0.108 | |
Set | SET nuclear oncogene | 0.091 | |
Ppargc1a | peroxisome proliferative activated receptor, gamma, coactivator 1 alpha | 0.090 | |
Skil | SKI-like | 0.089 | |
Wrn | Werner syndrome homolog (human) | 0.088 | |
Parp1 | poly (ADP-ribose) polymerase family, member 1 | 0.084 | |
Pola2 | polymerase (DNA directed), alpha 2 | 0.072 | |
Terf1 | telomeric repeat binding factor 1 | 0.071 | |
Smn1 | survival motor neuron 1 | 0.071 | |
Mcm5 | minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae) | 0.066 | |
Dnajc9 | DnaJ (Hsp40) homolog, subfamily C, member 9 | 0.066 | |
Mre11a | meiotic recombination 11 homolog A (S. cerevisiae) | 0.065 | |
Tipin | timeless interacting protein | 0.064 | |
Cacybp | calcyclin binding protein | 0.062 | |
Nphp4 | nephronophthisis 4 (juvenile) homolog (human) | 0.062 | |
Mdm4 | transformed mouse 3T3 cell double minute 4 | 0.056 | |
Msh2 | mutS homolog 2 (E. coli) | 0.053 | |
Rpa2 | replication protein A2 | 0.051 | |
Ptpn6 | protein tyrosine phosphatase, non-receptor type 6 | 0.050 | |
Lig1 | ligase I, DNA, ATP-dependent | 0.050 | |
Hsp90ab1 | heat shock protein 90 alpha (cytosolic), class B member 1 | 0.049 | |
Dnaja1 | DnaJ (Hsp40) homolog, subfamily A, member 1 | 0.044 | |
Dkc1 | dyskeratosis congenita 1, dyskerin homolog (human) | 0.043 | |
Ruvbl2 | RuvB-like protein 2 | 0.041 | |
Hmgb1 | high mobility group box 1 | 0.040 | |
Tubg1 | tubulin, gamma 1 | 0.039 | |
Smc2 | structural maintenance of chromosomes 2 | 0.039 | |
Igh | immunoglobulin heavy chain complex | 0.038 | |
Daxx | Fas death domain-associated protein | 0.038 | |
Pot1a | protection of telomeres 1A | 0.037 | |
Pold3 | polymerase (DNA-directed), delta 3, accessory subunit | 0.037 | |
Kpnb1 | karyopherin (importin) beta 1 | 0.034 | |
Ttn | titin | 0.032 | |
Elavl1 | ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) | 0.031 | |
Fkbp4 | FK506 binding protein 4 | 0.030 | |
Sae1 | SUMO1 activating enzyme subunit 1 | 0.028 | |
Rfc4 | replication factor C (activator 1) 4 | 0.028 | |
Vcp | valosin containing protein | 0.027 | |
Tdp1 | tyrosyl-DNA phosphodiesterase 1 | 0.027 | |
Anp32e | acidic (leucine-rich) nuclear phosphoprotein 32 family, member E | 0.027 | |
Nup93 | nucleoporin 93 | 0.026 | |
Hspa5 | heat shock protein 5 | 0.026 | |
Acd | adrenocortical dysplasia | 0.026 | |
Dtymk | deoxythymidylate kinase | 0.026 | |
Haus6 | HAUS augmin-like complex, subunit 6 | 0.026 | |
Wdhd1 | WD repeat and HMG-box DNA binding protein 1 | 0.025 | |
Iqcb1 | IQ calmodulin-binding motif containing 1 | 0.025 | |
Eftud2 | elongation factor Tu GTP binding domain containing 2 | 0.025 | |
Mlh1 | mutL homolog 1 (E. coli) | 0.022 | |
Hspd1 | heat shock protein 1 (chaperonin) | 0.022 | |
Rfc3 | replication factor C (activator 1) 3 | 0.022 | |
Nphp1 | nephronophthisis 1 (juvenile) homolog (human) | 0.022 | |
Smc4 | structural maintenance of chromosomes 4 | 0.021 | |
Fen1 | flap structure specific endonuclease 1 | 0.021 | |
Lin9 | lin-9 homolog (C. elegans) | 0.021 | |
Thoc4 | THO complex 4 | 0.021 | |
Hnrnpab | heterogeneous nuclear ribonucleoprotein A/B | 0.021 | |
Tubgcp2 | tubulin, gamma complex associated protein 2 | 0.021 | |
Pms2 | postmeiotic segregation increased 2 (S. cerevisiae) | 0.020 | |
Cad | carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase | 0.020 | |
Nucks1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 | 0.020 | |
Zc3hc1 | zinc finger, C3HC type 1 | 0.020 | |
Aaas | achalasia, adrenocortical insufficiency, alacrimia | 0.020 | |
Uba2 | ubiquitin-like modifier activating enzyme 2 | 0.020 | |
Gart | phosphoribosylglycinamide formyltransferase | 0.019 | |
0610010K14Rik | RIKEN cDNA 0610010K14 gene | 0.019 | |
Cbx5 | chromobox homolog 5 (Drosophila HP1a) | 0.019 | |
Nde1 | nuclear distribution gene E homolog 1 (A nidulans) | 0.019 | |
Lsm2 | LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) | 0.019 | |
Pcna | proliferating cell nuclear antigen | 0.018 | |
Ikbkb | inhibitor of kappaB kinase beta | 0.018 | |
Hells | helicase, lymphoid specific | 0.018 | |
Dna2 | DNA replication helicase 2 homolog (yeast) | 0.018 | |
Hsp90b1 | heat shock protein 90, beta (Grp94), member 1 | 0.018 | |
Ints9 | integrator complex subunit 9 | 0.017 | |
Ifrd2 | interferon-related developmental regulator 2 | 0.017 | |
Tmpo | thymopoietin | 0.017 | |
Gja1 | gap junction protein, alpha 1 | 0.017 | |
Snrpb | small nuclear ribonucleoprotein B | 0.017 | |
Prkdc | protein kinase, DNA activated, catalytic polypeptide | 0.017 | |
Rpgrip1l | Rpgrip1-like | 0.016 | |
Etaa1 | Ewing's tumor-associated antigen 1 | 0.016 | |
Ilf2 | interleukin enhancer binding factor 2 | 0.016 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
cku-70 | Protein CKU-70 | 0.025 | |
cel-1 | Protein CEL-1 | 0.021 | |
CELE_C01G10.8 | Protein C01G10.8 | 0.020 | |
rpn-3 | Protein RPN-3 | 0.019 | |
rad-23 | Protein RAD-23 | 0.019 | |
C35A5.8 | Protein C35A5.8 | 0.018 | |
mat-2 | Protein MAT-2 | 0.016 | |
csn-1 | Protein CSN-1 | 0.014 | |
mus-101 | Protein MUS-101 | 0.014 | |
dnj-12 | Protein DNJ-12 | 0.013 | |
C37A5.7 | Protein C37A5.7 | 0.013 | |
T23G4.3 | Protein T23G4.3 | 0.013 | |
drh-3 | Protein DRH-3 | 0.013 | |
Y34D9A.3 | Protein Y34D9A.3 | 0.013 | |
R11A8.2 | Protein R11A8.2 | 0.012 | |
smo-1 | Protein SMO-1 | 0.011 | |
rpt-3 | Protein RPT-3 | 0.011 | |
tba-2 | Protein TBA-2 | 0.011 | |
mms-19 | Protein MMS-19 | 0.011 | |
rod-1 | Protein ROD-1 | 0.011 | |
dpf-3 | Protein DPF-3 | 0.010 | |
sqv-4 | Protein SQV-4 | 0.010 | |
lbp-9 | Protein LBP-9 | 0.010 | |
ZK632.2 | Protein ZK632.2 | 0.010 | |
F08B4.3 | Protein F08B4.3 | 0.010 | |
C01H6.9 | Protein C01H6.9 | 0.010 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
TERF1 | telomeric repeat binding factor (NIMA-interacting) 1 | 0.996 | |
TINF2 | TERF1 (TRF1)-interacting nuclear factor 2 | 0.783 | |
ACD | adrenocortical dysplasia homolog (mouse) | 0.420 | |
BLM | Bloom syndrome, RecQ helicase-like | 0.386 | |
RPA2 | replication protein A2, 32kDa | 0.377 | |
NBN | nibrin | 0.266 | |
MRE11A | MRE11 meiotic recombination 11 homolog A (S. cerevisiae) | 0.264 | |
PINX1 | PIN2/TERF1 interacting, telomerase inhibitor 1 | 0.240 | |
TERF2 | telomeric repeat binding factor 2 | 0.240 | |
MSH2 | mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) | 0.227 | |
HIF1AN | hypoxia inducible factor 1, alpha subunit inhibitor | 0.217 | |
TERF2IP | telomeric repeat binding factor 2, interacting protein | 0.160 | |
SMC1A | structural maintenance of chromosomes 1A | 0.158 | |
RFC1 | replication factor C (activator 1) 1, 145kDa | 0.154 | |
ATM | ataxia telangiectasia mutated | 0.096 | |
RPA1 | replication protein A1, 70kDa | 0.095 | |
POLD3 | polymerase (DNA-directed), delta 3, accessory subunit | 0.091 | |
PPID | peptidylprolyl isomerase D | 0.091 | |
RPA3 | replication protein A3, 14kDa | 0.081 | |
XRCC6 | X-ray repair complementing defective repair in Chinese hamster cells 6 | 0.074 | |
ORC2 | origin recognition complex, subunit 2 | 0.067 | |
WRN | Werner syndrome, RecQ helicase-like | 0.060 | |
FANCD2 | Fanconi anemia, complementation group D2 | 0.054 | |
ORC1 | origin recognition complex, subunit 1 | 0.048 | |
HUS1 | HUS1 checkpoint homolog (S. pombe) | 0.047 | |
MDC1 | mediator of DNA-damage checkpoint 1 | 0.047 | |
STAG1 | stromal antigen 1 | 0.031 | |
MAPRE1 | microtubule-associated protein, RP/EB family, member 1 | 0.028 | |
POLA1 | polymerase (DNA directed), alpha 1, catalytic subunit | 0.027 | |
POT1 | protection of telomeres 1 homolog (S. pombe) | 0.025 | |
TNKS | tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase | 0.024 | |
PRIM1 | primase, DNA, polypeptide 1 (49kDa) | 0.024 | |
POLA2 | polymerase (DNA directed), alpha 2 (70kD subunit) | 0.024 | |
CDK2 | cyclin-dependent kinase 2 | 0.023 | |
TGIF1 | TGFB-induced factor homeobox 1 | 0.019 | |
TOP3A | topoisomerase (DNA) III alpha | 0.016 | |
FNBP1 | formin binding protein 1 | 0.015 | |
HSPH1 | heat shock 105kDa/110kDa protein 1 | 0.015 | |
MAPK7 | mitogen-activated protein kinase 7 | 0.014 | |
XRCC5 | X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) | 0.014 | |
USP7 | ubiquitin specific peptidase 7 (herpes virus-associated) | 0.013 | |
DAXX | death-domain associated protein | 0.013 | |
PRIM2 | primase, DNA, polypeptide 2 (58kDa) | 0.012 | |
ATRX | alpha thalassemia/mental retardation syndrome X-linked | 0.011 | |
PARP1 | poly (ADP-ribose) polymerase 1 | 0.011 | |
SMG6 | Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) | 0.011 | |
UNG | uracil-DNA glycosylase | 0.011 | |
BANP | BTG3 associated nuclear protein | 0.011 | |
PRKDC | protein kinase, DNA-activated, catalytic polypeptide | 0.011 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
CDC13 | Cdc13p | 0.931 | |
POL1 | Pol1p | 0.735 | |
RFA2 | Rfa2p | 0.666 | |
RFA1 | Rfa1p | 0.625 | |
EST2 | Est2p | 0.499 | |
POL12 | Pol12p | 0.459 | |
EST1 | Est1p | 0.390 | |
RAD53 | Rad53p | 0.303 | |
TEN1 | Ten1p | 0.252 | |
NOP10 | Nop10p | 0.222 | |
RAD5 | Rad5p | 0.214 | |
POL32 | Pol32p | 0.192 | |
SMC6 | Smc6p | 0.150 | |
POL2 | Pol2p | 0.146 | |
DNA2 | Dna2p | 0.135 | |
DUN1 | Dun1p | 0.108 | |
RIF1 | Rif1p | 0.103 | |
POL3 | Pol3p | 0.103 | |
RAD27 | Rad27p | 0.098 | |
CSM3 | Csm3p | 0.096 | |
MSH6 | Msh6p | 0.092 | |
MEC1 | Mec1p | 0.082 | |
PRI2 | Pri2p | 0.073 | |
STI1 | Sti1p | 0.071 | |
POL30 | Pol30p | 0.068 | |
CDC9 | Cdc9p | 0.066 | |
SGS1 | Sgs1p | 0.066 | |
PRI1 | Pri1p | 0.065 | |
PIF1 | Pif1p | 0.064 | |
STN1 | Stn1p | 0.063 | |
GAR1 | Gar1p | 0.051 | |
YDL156W | hypothetical protein | 0.049 | |
MRC1 | Mrc1p | 0.047 | |
RFA3 | Rfa3p | 0.046 | |
NOP6 | Nop6p | 0.043 | |
YLR162W | hypothetical protein | 0.040 | |
PSF1 | Psf1p | 0.039 | |
VAC17 | Vac17p | 0.039 | |
MGS1 | Mgs1p | 0.038 | |
TOP3 | Top3p | 0.038 | |
YBL081W | hypothetical protein | 0.038 | |
REV1 | Rev1p | 0.037 | |
RAD55 | Rad55p | 0.037 | |
MSH3 | Msh3p | 0.037 | |
RAD51 | Rad51p | 0.036 | |
PDS1 | Pds1p | 0.033 | |
YLR363W-A | hypothetical protein | 0.032 | |
DPB2 | Dpb2p | 0.032 | |
ARP10 | Arp10p | 0.030 | |
SRD1 | Srd1p | 0.029 | |
YOR390W | hypothetical protein | 0.029 | |
HHO1 | Hho1p | 0.028 | |
RIO1 | Rio1p | 0.028 | |
URA3 | Ura3p | 0.028 | |
LEU2 | Leu2p | 0.028 | |
YLR264C-A | hypothetical protein | 0.028 | |
RMI1 | Rmi1p | 0.027 | |
URB2 | Urb2p | 0.027 | |
PRS2 | Prs2p | 0.026 | |
THG1 | Thg1p | 0.026 | |
QRI1 | Qri1p | 0.026 | |
ADH2 | Adh2p | 0.026 | |
RTT105 | Rtt105p | 0.025 | |
YOL038C-A | hypothetical protein | 0.025 | |
MER1 | Mer1p | 0.024 | |
YNR071C | hypothetical protein | 0.024 | |
ORC2 | Orc2p | 0.023 | |
EXO1 | Exo1p | 0.023 | |
BRL1 | Brl1p | 0.023 | |
PRP31 | Prp31p | 0.023 | |
HO | Hop | 0.023 | |
ZPS1 | Zps1p | 0.023 | |
RRP36 | Rrp36p | 0.023 | |
TEL2 | Tel2p | 0.023 | |
EBS1 | Ebs1p | 0.022 | |
FUR4 | Fur4p | 0.022 | |
GPI13 | Gpi13p | 0.022 | |
HCH1 | Hch1p | 0.022 | |
YAR068W | hypothetical protein | 0.022 | |
HXT3 | Hxt3p | 0.022 | |
TOF1 | Tof1p | 0.022 | |
ELG1 | Elg1p | 0.022 | |
MCM10 | Mcm10p | 0.021 | |
YML053C | hypothetical protein | 0.021 | |
CDC21 | Cdc21p | 0.021 | |
GYL1 | Gyl1p | 0.021 | |
ALG14 | Alg14p | 0.021 | |
BUB1 | Bub1p | 0.021 | |
YLR042C | hypothetical protein | 0.021 | |
CUP1-1 | Cup1-1p | 0.021 | |
SWC7 | Swc7p | 0.021 | |
CAB4 | Cab4p | 0.020 | |
YJR129C | hypothetical protein | 0.020 | |
YPR157W | hypothetical protein | 0.020 | |
HST3 | Hst3p | 0.020 | |
REE1 | Ree1p | 0.020 | |
ATP6 | Atp6p | 0.020 | |
ARG8 | Arg8p | 0.020 | |
RNH201 | Rnh201p | 0.020 | |
SWM2 | Swm2p | 0.020 |