Process View
The network for 'quinone biosynthetic process' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.
The chemical reactions and pathways resulting in the formation of quinone.
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
Rnf11 | ring finger protein 11 | 0.200 | |
Cyld | cylindromatosis (turban tumor syndrome) | 0.136 | |
Tax1bp1 | Tax1 (human T-cell leukemia virus type I) binding protein 1 | 0.087 | |
Grb10 | growth factor receptor bound protein 10 | 0.076 | |
Suclg1 | succinate-CoA ligase, GDP-forming, alpha subunit | 0.054 | |
Ndufs1 | NADH dehydrogenase (ubiquinone) Fe-S protein 1 | 0.038 | |
Ndufa9 | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 | 0.038 | |
Tmem64 | transmembrane protein 64 | 0.032 | |
Traf6 | TNF receptor-associated factor 6 | 0.027 | |
Mrps28 | mitochondrial ribosomal protein S28 | 0.027 | |
Sdhc | succinate dehydrogenase complex, subunit C, integral membrane protein | 0.026 | |
Atp5a1 | ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 | 0.025 | |
Ndufs2 | NADH dehydrogenase (ubiquinone) Fe-S protein 2 | 0.024 | |
Prrg2 | proline-rich Gla (G-carboxyglutamic acid) polypeptide 2 | 0.023 | |
Ndufa5 | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 | 0.023 | |
Sdhd | succinate dehydrogenase complex, subunit D, integral membrane protein | 0.023 | |
Mrpl16 | mitochondrial ribosomal protein L16 | 0.023 | |
Pcmtd1 | protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 | 0.021 | |
Fh1 | fumarate hydratase 1 | 0.021 | |
Ndufab1 | NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 | 0.019 | |
Usp9x | ubiquitin specific peptidase 9, X chromosome | 0.019 | |
Ndufs3 | NADH dehydrogenase (ubiquinone) Fe-S protein 3 | 0.018 | |
Ndfip1 | Nedd4 family interacting protein 1 | 0.016 | |
Slc25a4 | solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4 | 0.015 | |
Ndufa8 | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 | 0.014 | |
Sdhb | succinate dehydrogenase complex, subunit B, iron sulfur (Ip) | 0.014 | |
Aco2 | aconitase 2, mitochondrial | 0.014 | |
Samm50 | sorting and assembly machinery component 50 homolog (S. cerevisiae) | 0.013 | |
Idh2 | isocitrate dehydrogenase 2 (NADP+), mitochondrial | 0.013 | |
Pmepa1 | prostate transmembrane protein, androgen induced 1 | 0.012 | |
Pcmtd2 | protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 | 0.012 | |
Gfm1 | G elongation factor, mitochondrial 1 | 0.012 | |
Atp5b | ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit | 0.012 | |
Cflar | CASP8 and FADD-like apoptosis regulator | 0.012 | |
Ripk1 | receptor (TNFRSF)-interacting serine-threonine kinase 1 | 0.012 | |
Mrpl27 | mitochondrial ribosomal protein L27 | 0.012 | |
Mrpl18 | mitochondrial ribosomal protein L18 | 0.011 | |
Ahcyl1 | S-adenosylhomocysteine hydrolase-like 1 | 0.011 | |
Wbp1 | WW domain binding protein 1 | 0.011 | |
Mdh2 | malate dehydrogenase 2, NAD (mitochondrial) | 0.011 | |
Atp11c | ATPase, class VI, type 11C | 0.011 | |
Lrpprc | leucine-rich PPR-motif containing | 0.011 | |
Ndufs6 | NADH dehydrogenase (ubiquinone) Fe-S protein 6 | 0.011 | |
Gtf2i | general transcription factor II I | 0.011 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
C34C6.4 | Protein C34C6.4 | 0.174 | |
nft-1 | Protein NFT-1 | 0.044 | |
clk-1 | Protein CLK-1 | 0.039 | |
CELE_ZK637.2 | Protein ZK637.2 | 0.035 | |
Y48E1B.3 | Protein Y48E1B.3 | 0.031 | |
T27A3.6 | Protein T27A3.6 | 0.031 | |
F39B2.3 | Protein F39B2.3 | 0.031 | |
F33D4.5 | Protein F33D4.5 | 0.031 | |
F35G2.2 | Protein F35G2.2 | 0.026 | |
H27A22.1 | Protein H27A22.1 | 0.021 | |
pcs-1 | Protein PCS-1 | 0.020 | |
mrpl-47 | Protein MRPL-47 | 0.018 | |
F01G4.5 | Protein F01G4.5 | 0.017 | |
nstp-4 | Protein NSTP-4 | 0.015 | |
F15D3.7 | Protein F15D3.7 | 0.014 | |
C30F12.2 | Protein C30F12.2 | 0.013 | |
mrps-18C | Protein MRPS-18C | 0.013 | |
K11H12.8 | Protein K11H12.8 | 0.013 | |
F56C11.3 | Protein F56C11.3 | 0.013 | |
C32E8.9 | Protein C32E8.9 | 0.012 | |
T20D3.6 | Protein T20D3.6 | 0.011 | |
ndx-9 | Protein NDX-9 | 0.010 | |
T27F6.6 | Protein T27F6.6 | 0.010 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
SMURF2 | SMAD specific E3 ubiquitin protein ligase 2 | 0.984 | |
WWP2 | WW domain containing E3 ubiquitin protein ligase 2 | 0.799 | |
NEDD4 | neural precursor cell expressed, developmentally down-regulated 4 | 0.552 | |
SMURF1 | SMAD specific E3 ubiquitin protein ligase 1 | 0.492 | |
FBXL15 | F-box and leucine-rich repeat protein 15 | 0.410 | |
SMAD1 | SMAD family member 1 | 0.403 | |
ZFYVE9 | zinc finger, FYVE domain containing 9 | 0.396 | |
RNF11 | ring finger protein 11 | 0.331 | |
SMAD4 | SMAD family member 4 | 0.226 | |
ANKRD13A | ankyrin repeat domain 13A | 0.099 | |
CYP4F2 | cytochrome P450, family 4, subfamily F, polypeptide 2 | 0.095 | |
SCNN1B | sodium channel, nonvoltage-gated 1, beta | 0.074 | |
TRAF4 | TNF receptor-associated factor 4 | 0.050 | |
NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 | 0.048 | |
ING2 | inhibitor of growth family, member 2 | 0.035 | |
WWP1 | WW domain containing E3 ubiquitin protein ligase 1 | 0.035 | |
STAMBP | STAM binding protein | 0.033 | |
SCNN1A | sodium channel, nonvoltage-gated 1 alpha | 0.027 | |
RHOA | ras homolog gene family, member A | 0.027 | |
SKIL | SKI-like oncogene | 0.025 | |
SMAD5 | SMAD family member 5 | 0.025 | |
TGFBR1 | transforming growth factor, beta receptor 1 | 0.021 | |
CXXC5 | CXXC finger protein 5 | 0.020 | |
CYP3A43 | cytochrome P450, family 3, subfamily A, polypeptide 43 | 0.018 | |
RAPGEF2 | Rap guanine nucleotide exchange factor (GEF) 2 | 0.017 | |
SPG20 | spastic paraplegia 20 (Troyer syndrome) | 0.016 | |
NEDD4L | neural precursor cell expressed, developmentally down-regulated 4-like | 0.016 | |
SOX7 | SRY (sex determining region Y)-box 7 | 0.016 | |
SMAD6 | SMAD family member 6 | 0.015 | |
EPS15 | epidermal growth factor receptor pathway substrate 15 | 0.014 | |
RTN4IP1 | reticulon 4 interacting protein 1 | 0.014 | |
PLEKHO1 | pleckstrin homology domain containing, family O member 1 | 0.013 | |
SMAD7 | SMAD family member 7 | 0.013 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
CAT5 | Cat5p | 0.031 | |
COQ6 | Coq6p | 0.030 | |
COQ9 | Coq9p | 0.025 | |
LAT1 | Lat1p | 0.019 | |
APD1 | Apd1p | 0.018 | |
COQ5 | Coq5p | 0.018 | |
BCS1 | Bcs1p | 0.015 | |
YMR210W | hypothetical protein | 0.014 | |
COQ3 | Coq3p | 0.013 | |
ICP55 | Icp55p | 0.013 | |
IMP1 | Imp1p | 0.013 | |
COQ10 | Coq10p | 0.013 | |
SRD1 | Srd1p | 0.013 | |
YLR264C-A | hypothetical protein | 0.013 | |
YMR166C | hypothetical protein | 0.013 | |
AGC1 | Agc1p | 0.012 | |
MSF1 | Msf1p | 0.012 | |
RAS2 | Ras2p | 0.012 | |
YOL038C-A | hypothetical protein | 0.012 | |
PCL9 | Pcl9p | 0.012 | |
LEU2 | Leu2p | 0.012 | |
ARG8 | Arg8p | 0.012 | |
YLR042C | hypothetical protein | 0.012 | |
MF(ALPHA)2 | Mf(alpha)2p | 0.012 | |
YLR162W | hypothetical protein | 0.011 | |
FUM1 | Fum1p | 0.011 | |
PRD1 | Prd1p | 0.011 | |
CUP1-1 | Cup1-1p | 0.011 | |
COA1 | Coa1p | 0.011 | |
ARP10 | Arp10p | 0.011 | |
YAR068W | hypothetical protein | 0.011 | |
MER1 | Mer1p | 0.011 | |
YIA6 | Yia6p | 0.011 | |
YLR132C | hypothetical protein | 0.011 | |
YIR035C | hypothetical protein | 0.010 | |
COX18 | Cox18p | 0.010 | |
SCO2 | Sco2p | 0.010 | |
LEU5 | Leu5p | 0.010 | |
SMF1 | Smf1p | 0.010 | |
HPF1 | Hpf1p | 0.010 | |
MF(ALPHA)1 | Mf(alpha)1p | 0.010 | |
YML079W | hypothetical protein | 0.010 | |
VPS55 | Vps55p | 0.010 | |
ZPS1 | Zps1p | 0.010 | |
YPR157W | hypothetical protein | 0.010 |