The network for 'regulation of mrna stability' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

regulation of mrna stability

Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.

NameDescriptionProbabilityFunc Analog Organism
Hnrpdlheterogeneous nuclear ribonucleoprotein D-like0.768
SetSET nuclear oncogene0.736
Srsf1serine/arginine-rich splicing factor 10.649
Sfpqsplicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)0.518
Ddx60DEAD (Asp-Glu-Ala-Asp) box polypeptide 600.427
Hnrnpa1heterogeneous nuclear ribonucleoprotein A10.398
Fusfusion, derived from t(12;16) malignant liposarcoma (human)0.372
Neurl1aneuralized homolog 1A (Drosophila)0.367
Srsf2serine/arginine-rich splicing factor 20.309
Stat3signal transducer and activator of transcription 30.298
Nclnucleolin0.258
Trp53transformation related protein 530.242
Ddx21DEAD (Asp-Glu-Ala-Asp) box polypeptide 210.233
Hnrnpdheterogeneous nuclear ribonucleoprotein D0.226
Srsf6serine/arginine-rich splicing factor 60.215
Hnrnpuheterogeneous nuclear ribonucleoprotein U0.209
Syncripsynaptotagmin binding, cytoplasmic RNA interacting protein0.187
Tcerg1transcription elongation regulator 1 (CA150)0.185
Khdrbs1KH domain containing, RNA binding, signal transduction associated 10.179
Hnrnpmheterogeneous nuclear ribonucleoprotein M0.169
Rc3h1RING CCCH (C3H) domains 10.152
Elavl1ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)0.145
TardbpTAR DNA binding protein0.141
DekDEK oncogene (DNA binding)0.132
Rnps1ribonucleic acid binding protein S10.131
B230308N11RikRIKEN cDNA B230308N11 gene0.130
RbmxrtRNA binding motif protein, X chromosome retrogene0.130
Ddx5DEAD (Asp-Glu-Ala-Asp) box polypeptide 50.124
Tgfb1transforming growth factor, beta 10.123
Hnrnpkheterogeneous nuclear ribonucleoprotein K0.120
Hnrnph1heterogeneous nuclear ribonucleoprotein H10.117
Unc93b1unc-93 homolog B1 (C. elegans)0.109
Kpnb1karyopherin (importin) beta 10.106
Mapk14mitogen-activated protein kinase 140.100
Srsf3serine/arginine-rich splicing factor 30.098
Hnrnpa3heterogeneous nuclear ribonucleoprotein A30.098
Caprin1cell cycle associated protein 10.097
Rararetinoic acid receptor, alpha0.088
Smad4MAD homolog 4 (Drosophila)0.087
Pcbp1poly(rC) binding protein 10.077
Ddx39DEAD (Asp-Glu-Ala-Asp) box polypeptide 390.076
Ewsr1Ewing sarcoma breakpoint region 10.074
Ptges3prostaglandin E synthase 3 (cytosolic)0.070
2500003M10RikRIKEN cDNA 2500003M10 gene0.070
Luc7l3LUC7-like 3 (S. cerevisiae)0.069
Hmgb1high mobility group box 10.065
Tfdp1transcription factor Dp 10.063
Btg2B-cell translocation gene 2, anti-proliferative0.062
Hnrnpabheterogeneous nuclear ribonucleoprotein A/B0.061
Ptmaprothymosin alpha0.061
Trim25tripartite motif-containing 250.057
Dhx15DEAH (Asp-Glu-Ala-His) box polypeptide 150.053
Prdm1PR domain containing 1, with ZNF domain0.052
Pabpn1poly(A) binding protein, nuclear 10.051
Parp2poly (ADP-ribose) polymerase family, member 20.051
Lyz2lysozyme 20.049
Ywhaetyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide0.049
Nucks1nuclear casein kinase and cyclin-dependent kinase substrate 10.048
Eif4a1eukaryotic translation initiation factor 4A10.047
Smad3MAD homolog 3 (Drosophila)0.047
Dhx9DEAH (Asp-Glu-Ala-His) box polypeptide 90.046
Parp1poly (ADP-ribose) polymerase family, member 10.045
Ptenphosphatase and tensin homolog0.045
Bcl2l11BCL2-like 11 (apoptosis facilitator)0.044
Tlr4toll-like receptor 40.042
Anp32bacidic (leucine-rich) nuclear phosphoprotein 32 family, member B0.042
Ezh2enhancer of zeste homolog 2 (Drosophila)0.041
Luc7l2LUC7-like 2 (S. cerevisiae)0.041
Hnrnph3heterogeneous nuclear ribonucleoprotein H30.040
Hnrnpul2heterogeneous nuclear ribonucleoprotein U-like 20.039
Hnrnpa0heterogeneous nuclear ribonucleoprotein A00.039
Fubp1far upstream element (FUSE) binding protein 10.038
Mcl1myeloid cell leukemia sequence 10.037
Dis3DIS3 mitotic control homolog (S. cerevisiae)0.037
Ddx3xDEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked0.036
Anp32eacidic (leucine-rich) nuclear phosphoprotein 32 family, member E0.036
Relav-rel reticuloendotheliosis viral oncogene homolog A (avian)0.035
Ddx39bDEAD (Asp-Glu-Ala-Asp) box polypeptide 39B0.034
Tcl1T-cell lymphoma breakpoint 10.034
Gja1gap junction protein, alpha 10.033
Nononon-POU-domain-containing, octamer binding protein0.033
Rnf111ring finger 1110.032
Ptch1patched homolog 10.030
Hdgfhepatoma-derived growth factor0.030
G3bp1Ras-GTPase-activating protein SH3-domain binding protein 10.029
Pabpc4poly(A) binding protein, cytoplasmic 40.029
Srsf7serine/arginine-rich splicing factor 70.029
Skp2S-phase kinase-associated protein 2 (p45)0.029
Gnl3guanine nucleotide binding protein-like 3 (nucleolar)0.029
Rbm12RNA binding motif protein 120.029
Inainternexin neuronal intermediate filament protein, alpha0.029
Xpo1exportin 1, CRM1 homolog (yeast)0.029
Rbm14RNA binding motif protein 140.028
Sp1trans-acting transcription factor 10.028
Nop56NOP56 ribonucleoprotein homolog (yeast)0.028
Mlh1mutL homolog 1 (E. coli)0.027
Rcor1REST corepressor 10.027
Ptgs2prostaglandin-endoperoxide synthase 20.027
CebpbCCAAT/enhancer binding protein (C/EBP), beta0.027
Irak4interleukin-1 receptor-associated kinase 40.026
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Caenorhabditis elegans
NameDescriptionProbabilityFunc Analog Organism
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Danio rerio
NameDescriptionProbabilityFunc Analog Organism
hnrnpabheterogeneous nuclear ribonucleoprotein A/B0.417
srsf2serine/arginine-rich splicing factor 20.308
zgc:77366zgc:773660.167
khdrbs1aKH domain containing, RNA binding, signal transduction associated 1a0.100
ewsr1aEwing sarcoma breakpoint region 1a0.078
lrmplymphoid-restricted membrane protein0.075
eif4a1aeukaryotic translation initiation factor 4A, isoform 1A0.056
rbb4retinoblastoma binding protein 40.046
hnrnpa0heterogeneous nuclear ribonucleoprotein A00.045
hmgb1bhigh-mobility group box 1b0.042
bocbrother of CDO0.040
chukconserved helix-loop-helix ubiquitous kinase0.040
setbSET translocation (myeloid leukemia-associated) B0.037
sfrs3bsplicing factor, arginine/serine-rich 3b0.037
ef1aelongation factor 1-alpha0.034
dag1dystroglycan 10.031
marcksbmyristoylated alanine rich protein kinase C substrate b0.028
ddx19DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast)0.028
srsf4serine/arginine-rich splicing factor 40.027
prmt1protein arginine methyltransferase 10.026
pl10pl100.026
syncriplsynaptotagmin binding, cytoplasmic RNA interacting protein, like0.025
api5apoptosis inhibitor 50.024
hnrplheterogeneous nuclear ribonucleoprotein L0.021
usp10ubiquitin specific peptidase 100.019
zgc:193933zgc:1939330.019
xrn25'-3' exoribonuclease 20.018
zgc:66100zgc:661000.018
anp32eacidic (leucine-rich) nuclear phosphoprotein 32 family, member E0.018
anp32aacidic (leucine-rich) nuclear phosphoprotein 32 family, member A0.017
snrnp70small nuclear ribonucleoprotein 70 (U1)0.017
wdr82WD repeat domain containing 820.016
trim71tripartite motif-containing 710.016
col18a1collagen type XVIII, alpha 10.016
si:ch211-51e12.7si:ch211-51e12.70.015
flot2aflotillin 2a0.015
sfrp1asecreted frizzled-related protein 1a0.015
ssrp1astructure specific recognition protein 1a0.014
khdrbs1bKH domain containing, RNA binding, signal transduction associated 1b0.013
birc5bbaculoviral IAP repeat-containing 5B0.013
wu:fb17g07wu:fb17g070.013
nanos3nanos homolog 30.013
dlddeltaD0.012
smarca5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 50.011
lama2laminin, alpha 20.011
efnb3bephrin B3b0.011
sfpqsplicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)0.011
spry4sprouty (Drosophila) homolog 40.011
lmnb1lamin B10.011
bonbonnie and clyde0.011
arf2ADP-ribosylation factor 20.011
elavl1ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)0.011
bucbucky ball0.011
zgc:77052zgc:770520.011
junjun proto-oncogene0.011
cnihcornichon homolog (Drosophila)0.010
hnrnph1lheterogeneous nuclear ribonucleoprotein H1, like0.010
zgc:112425zgc:1124250.010
mxtx2mix-type homeobox gene 20.010
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Drosophila melanogaster
NameDescriptionProbabilityFunc Analog Organism
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Homo sapiens
NameDescriptionProbabilityFunc Analog Organism
HNRNPDheterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)0.996
TOB1transducer of ERBB2, 10.920
HNRNPA1heterogeneous nuclear ribonucleoprotein A10.889
MAPK14mitogen-activated protein kinase 140.848
HNRNPA0heterogeneous nuclear ribonucleoprotein A00.538
E2F1E2F transcription factor 10.535
HNRNPKheterogeneous nuclear ribonucleoprotein K0.482
RB1retinoblastoma 10.481
HNRNPUheterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)0.388
HNRNPFheterogeneous nuclear ribonucleoprotein F0.330
ILF3interleukin enhancer binding factor 3, 90kDa0.321
SYNCRIPsynaptotagmin binding, cytoplasmic RNA interacting protein0.272
U2AF2U2 small nuclear RNA auxiliary factor 20.226
SFPQsplicing factor proline/glutamine-rich0.203
RBL2retinoblastoma-like 2 (p130)0.183
KHDRBS1KH domain containing, RNA binding, signal transduction associated 10.182
DHX9DEAH (Asp-Glu-Ala-His) box polypeptide 90.130
HNRNPRheterogeneous nuclear ribonucleoprotein R0.124
HNRNPH1heterogeneous nuclear ribonucleoprotein H1 (H)0.106
TFDP2transcription factor Dp-2 (E2F dimerization partner 2)0.105
ILF2interleukin enhancer binding factor 2, 45kDa0.098
DYRK1Adual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A0.086
HSF1heat shock transcription factor 10.080
RBMXRNA binding motif protein, X-linked0.077
HNRNPCheterogeneous nuclear ribonucleoprotein C (C1/C2)0.076
TIRAPtoll-interleukin 1 receptor (TIR) domain containing adaptor protein0.073
NRP1neuropilin 10.068
PRMT1protein arginine methyltransferase 10.065
IRAK2interleukin-1 receptor-associated kinase 20.064
TARDBPTAR DNA binding protein0.064
TFDP1transcription factor Dp-10.058
PTBP1polypyrimidine tract binding protein 10.058
TLR4toll-like receptor 40.054
SUMO3SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)0.054
HNRNPA2B1heterogeneous nuclear ribonucleoprotein A2/B10.053
E2F4E2F transcription factor 4, p107/p130-binding0.053
FLT1fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)0.050
USP7ubiquitin specific peptidase 7 (herpes virus-associated)0.048
CUL1cullin 10.044
E2F3E2F transcription factor 30.044
SF1splicing factor 10.041
EIF2C1eukaryotic translation initiation factor 2C, 10.039
TOP1topoisomerase (DNA) I0.035
HNRNPH3heterogeneous nuclear ribonucleoprotein H3 (2H9)0.032
HNRNPABheterogeneous nuclear ribonucleoprotein A/B0.031
BTG2BTG family, member 20.030
DAZLdeleted in azoospermia-like0.030
PRKRAprotein kinase, interferon-inducible double stranded RNA dependent activator0.030
AMMECR1Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 10.029
ELAVL1ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)0.027
MYD88myeloid differentiation primary response gene (88)0.027
QKIquaking homolog, KH domain RNA binding (mouse)0.026
CEBPBCCAAT/enhancer binding protein (C/EBP), beta0.026
WDR26WD repeat domain 260.025
CUL3cullin 30.025
EIF2C2eukaryotic translation initiation factor 2C, 20.024
MAPK6mitogen-activated protein kinase 60.024
IRAK4interleukin-1 receptor-associated kinase 40.024
CUX1cut-like homeobox 10.024
MATR3matrin 30.023
NONOnon-POU domain containing, octamer-binding0.023
HNRNPA3heterogeneous nuclear ribonucleoprotein A30.022
MDM2Mdm2 p53 binding protein homolog (mouse)0.022
STC2stanniocalcin 20.021
RBM12RNA binding motif protein 120.021
PABPC4poly(A) binding protein, cytoplasmic 4 (inducible form)0.021
HMGA2high mobility group AT-hook 20.019
YBX1Y box binding protein 10.019
HABP4hyaluronan binding protein 40.019
IRAK1interleukin-1 receptor-associated kinase 10.019
MYBL2v-myb myeloblastosis viral oncogene homolog (avian)-like 20.019
PURApurine-rich element binding protein A0.018
HDAC11histone deacetylase 110.018
G3BP1GTPase activating protein (SH3 domain) binding protein 10.017
KDRkinase insert domain receptor (a type III receptor tyrosine kinase)0.017
CNOT2CCR4-NOT transcription complex, subunit 20.017
PHC2polyhomeotic homolog 2 (Drosophila)0.017
HNRPDLheterogeneous nuclear ribonucleoprotein D-like0.017
NFIL3nuclear factor, interleukin 3 regulated0.016
CAP2CAP, adenylate cyclase-associated protein, 2 (yeast)0.016
FBXO33F-box protein 330.016
GSK3Aglycogen synthase kinase 3 alpha0.015
UBE2Iubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)0.015
MAST1microtubule associated serine/threonine kinase 10.014
CUL4Acullin 4A0.014
AHRaryl hydrocarbon receptor0.014
AEBP2AE binding protein 20.013
NUP98nucleoporin 98kDa0.013
RBBP4retinoblastoma binding protein 40.013
LIN9lin-9 homolog (C. elegans)0.013
E2F2E2F transcription factor 20.013
NCOA6nuclear receptor coactivator 60.013
SF3B4splicing factor 3b, subunit 4, 49kDa0.013
PURBpurine-rich element binding protein B0.012
CEBPDCCAAT/enhancer binding protein (C/EBP), delta0.012
SRSF9serine/arginine-rich splicing factor 90.012
KAT2BK(lysine) acetyltransferase 2B0.012
FUSfused in sarcoma0.012
CTCFCCCTC-binding factor (zinc finger protein)0.012
HDAC1histone deacetylase 10.012
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Rattus norvegicus
NameDescriptionProbabilityFunc Analog Organism
Sfpqsplicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)0.103
Nclnucleolin0.093
Fusfusion (involved in t(12;16) in malignant liposarcoma) (human)0.071
Hnrnpa1heterogeneous nuclear ribonucleoprotein A10.053
TardbpTAR DNA binding protein0.035
CebpbCCAAT/enhancer binding protein (C/EBP), beta0.032
Anp32eacidic (leucine-rich) nuclear phosphoprotein 32 family, member E0.024
RbmxrtlRNA binding motif protein, X chromosome retrogene-like0.023
Junbjun B proto-oncogene0.023
Hsp90aa1heat shock protein 90, alpha (cytosolic), class A member 10.022
Nfkbianuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha0.019
SetSET nuclear oncogene0.018
Dusp1dual specificity phosphatase 10.018
LOC100364212heterogeneous nuclear ribonucleoprotein K-like0.018
Anp32bacidic (leucine-rich) nuclear phosphoprotein 32 family, member B0.018
Bxdc2brix domain containing 20.017
Slc18a2solute carrier family 18 (vesicular monoamine), member 20.016
Mat2amethionine adenosyltransferase II, alpha0.015
Cand1cullin-associated and neddylation-dissociated 10.015
Rbm3RNA binding motif (RNP1, RRM) protein 30.015
Dhx9DEAH (Asp-Glu-Ala-His) box polypeptide 90.014
Morf4l2mortality factor 4 like 20.014
Mafkv-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)0.014
Pim3pim-3 oncogene0.014
Nedd4neural precursor cell expressed, developmentally down-regulated 40.014
Dpysl3dihydropyrimidinase-like 30.013
Smc1astructural maintenance of chromosomes 1A0.013
Btg2BTG family, member 20.013
Snai1snail homolog 1 (Drosophila)0.013
Dhx15DEAH (Asp-Glu-Ala-His) box polypeptide 150.013
Stat3signal transducer and activator of transcription 30.013
Gja1gap junction protein, alpha 10.013
FosFBJ osteosarcoma oncogene0.013
Ppp1r15aprotein phosphatase 1, regulatory (inhibitor) subunit 15A0.012
Smarca5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 50.012
Csrp1cysteine and glycine-rich protein 10.012
Hnrpmheterogeneous nuclear ribonucleoprotein M0.011
Jak1Janus kinase 10.011
Sart1squamous cell carcinoma antigen recognized by T cells0.011
Ptmaprothymosin alpha0.011
Spry1sprouty homolog 1, antagonist of FGF signaling (Drosophila)0.011
Hnrnpa3heterogeneous nuclear ribonucleoprotein A30.011
Kpnb1karyopherin (importin) beta 10.011
LOC500300similar to hypothetical protein MGC68350.010
Ppatphosphoribosyl pyrophosphate amidotransferase0.010
Ier2immediate early response 20.010
Wbp11WW domain binding protein 110.010
Nononon-POU domain containing, octamer-binding0.010
Alas2aminolevulinate, delta-, synthase 20.010
Gap43growth associated protein 430.010
FcgrtFc fragment of IgG, receptor, transporter, alpha0.010
Sema3asema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A0.010
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Saccharomyces cerevisiae
NameDescriptionProbabilityFunc Analog Organism