The network for 'ribonucleoside monophosphate biosynthetic process' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

ribonucleoside monophosphate biosynthetic process

The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with phosphate on the sugar.

NameDescriptionProbabilityFunc Analog Organism
Gapdhglyceraldehyde-3-phosphate dehydrogenase0.999
Tpi1triosephosphate isomerase 10.996
Gpi1glucose phosphate isomerase 10.974
Pkm2pyruvate kinase, muscle0.972
Gm5506predicted gene 55060.955
Pgk1phosphoglycerate kinase 10.849
Atp5bATP synthase, H+ transporting mitochondrial F1 complex, beta subunit0.660
Pgam1phosphoglycerate mutase 10.379
Atp5a1ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 10.316
Trp53transformation related protein 530.299
Cscitrate synthase0.221
Ppargperoxisome proliferator activated receptor gamma0.161
Pfklphosphofructokinase, liver, B-type0.131
Il6stinterleukin 6 signal transducer0.108
Got1glutamate oxaloacetate transaminase 1, soluble0.107
Myd88myeloid differentiation primary response gene 880.106
Ppargc1aperoxisome proliferative activated receptor, gamma, coactivator 1 alpha0.100
Leprleptin receptor0.100
Nr3c1nuclear receptor subfamily 3, group C, member 10.076
Cyb5bcytochrome b5 type B0.067
Atp5g3ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)0.064
CebpbCCAAT/enhancer binding protein (C/EBP), beta0.061
Hprthypoxanthine guanine phosphoribosyl transferase0.050
Mdh2malate dehydrogenase 2, NAD (mitochondrial)0.046
Aco2aconitase 2, mitochondrial0.043
Vdac2voltage-dependent anion channel 20.043
Ppargc1bperoxisome proliferative activated receptor, gamma, coactivator 1 beta0.040
Gnai2guanine nucleotide binding protein (G protein), alpha inhibiting 20.039
Elavl1ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)0.036
Phbprohibitin0.035
Slc25a11solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 110.032
MaxMax protein0.032
Bsgbasigin0.032
Csf1colony stimulating factor 1 (macrophage)0.031
Ptenphosphatase and tensin homolog0.030
Parlpresenilin associated, rhomboid-like0.030
Spp1secreted phosphoprotein 10.030
Ppa1pyrophosphatase (inorganic) 10.029
Idh3aisocitrate dehydrogenase 3 (NAD+) alpha0.029
Tlr2toll-like receptor 20.027
Uqcrc1ubiquinol-cytochrome c reductase core protein 10.027
Psmb7proteasome (prosome, macropain) subunit, beta type 70.027
Ncoa3nuclear receptor coactivator 30.027
Foxp3forkhead box P30.026
Tkttransketolase0.026
Cdkn1acyclin-dependent kinase inhibitor 1A (P21)0.024
Lap3leucine aminopeptidase 30.023
Cyc1cytochrome c-10.023
Nos3nitric oxide synthase 3, endothelial cell0.021
Relav-rel reticuloendotheliosis viral oncogene homolog A (avian)0.021
Nfil3nuclear factor, interleukin 3, regulated0.020
Dctpp1dCTP pyrophosphatase 10.020
Psmb2proteasome (prosome, macropain) subunit, beta type 20.020
Lyz2lysozyme 20.019
Smad3MAD homolog 3 (Drosophila)0.019
Apcadenomatosis polyposis coli0.019
Ptpn11protein tyrosine phosphatase, non-receptor type 110.019
Tnfrsf1atumor necrosis factor receptor superfamily, member 1a0.018
Vdrvitamin D receptor0.018
Ttntitin0.018
Ldhalactate dehydrogenase A0.018
Prelid1PRELI domain containing 10.018
Agtr2angiotensin II receptor, type 20.017
Pgm2phosphoglucomutase 20.017
Nfkb1nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p1050.017
Ppifpeptidylprolyl isomerase F (cyclophilin F)0.017
Stat5bsignal transducer and activator of transcription 5B0.016
Gys1glycogen synthase 1, muscle0.016
Apoeapolipoprotein E0.016
CebpaCCAAT/enhancer binding protein (C/EBP), alpha0.016
Bcl3B-cell leukemia/lymphoma 30.015
Mycmyelocytomatosis oncogene0.015
Ahraryl-hydrocarbon receptor0.015
Aldoaaldolase A, fructose-bisphosphate0.015
Fth1ferritin heavy chain 10.015
Immtinner membrane protein, mitochondrial0.015
Ndufa9NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 90.015
Vdac1voltage-dependent anion channel 10.015
Echs1enoyl Coenzyme A hydratase, short chain, 1, mitochondrial0.015
Il10interleukin 100.015
Suclg2succinate-Coenzyme A ligase, GDP-forming, beta subunit0.014
Pdha1pyruvate dehydrogenase E1 alpha 10.014
Stat6signal transducer and activator of transcription 60.014
Kitkit oncogene0.014
Timm17atranslocase of inner mitochondrial membrane 17a0.013
Agpat21-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)0.013
Ghrgrowth hormone receptor0.013
Nedd4lneural precursor cell expressed, developmentally down-regulated gene 4-like0.013
Mrpl18mitochondrial ribosomal protein L180.013
Ctsdcathepsin D0.013
Rcl1RNA terminal phosphate cyclase-like 10.012
Pccbpropionyl Coenzyme A carboxylase, beta polypeptide0.012
Ywhabtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide0.012
Wdr77WD repeat domain 770.012
Hk2hexokinase 20.012
Cops6COP9 (constitutive photomorphogenic) homolog, subunit 6 (Arabidopsis thaliana)0.012
FasFas (TNF receptor superfamily member 6)0.012
Il6interleukin 60.011
Pus1pseudouridine synthase 10.011
Relbavian reticuloendotheliosis viral (v-rel) oncogene related B0.011
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Caenorhabditis elegans
NameDescriptionProbabilityFunc Analog Organism
atp-2Protein ATP-20.163
H28O16.1Protein H28O16.10.039
cts-1Protein CTS-10.038
gdh-1Protein GDH-10.033
ahcy-1Protein AHCY-10.028
chch-3Protein CHCH-30.027
ucr-1Protein UCR-10.027
isp-1Protein ISP-10.026
dld-1Protein DLD-10.024
F58F12.1Protein F58F12.10.024
pdhb-1Protein PDHB-10.022
cyc-2.1Protein CYC-2.10.022
atp-3Protein ATP-30.020
atp-5Protein ATP-50.016
ant-1.1Protein ANT-1.10.016
R05G6.7Protein R05G6.70.015
dlst-1Protein DLST-10.015
ril-1Protein RIL-10.014
aco-2Protein ACO-20.014
got-2.2Protein GOT-2.20.013
rps-2Protein RPS-20.012
B0491.5Protein B0491.50.012
CELE_F59C6.5Protein F59C6.50.011
act-3Protein ACT-30.010
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Danio rerio
NameDescriptionProbabilityFunc Analog Organism
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Drosophila melanogaster
NameDescriptionProbabilityFunc Analog Organism
EnoEnolase0.192
l(1)G0334lethal (1) G03340.114
l(1)G0230lethal (1) G02300.112
GlyPGlycogen phosphorylase0.083
EfTuMElongation factor Tu mitochondrial0.071
SdhBSuccinate dehydrogenase B0.061
CG8036CG8036 gene product from transcript CG8036-RB0.058
porinCG6647 gene product from transcript CG6647-RA0.052
CG11255CG11255 gene product from transcript CG11255-RA0.047
ATPsyn-gammaATP synthase-gamma chain0.046
ScsalphaSuccinyl coenzyme A synthetase alpha subunit0.043
CG11876CG11876 gene product from transcript CG11876-RA0.041
blwbellwether0.039
highikaru genki0.037
ade5CG3989 gene product from transcript CG3989-RA0.036
CG17273CG17273 gene product from transcript CG17273-RA0.032
CG3011CG3011 gene product from transcript CG3011-RA0.028
ImpL3Ecdysone-inducible gene L30.028
CG8709CG8709 gene product from transcript CG8709-RK0.027
AconAconitase0.027
SpargelCG9809 gene product from transcript CG9809-RB0.026
ATPsyn-bATP synthase, subunit b0.025
CG15267CG15267 gene product from transcript CG15267-RA0.023
CG3321CG3321 gene product from transcript CG3321-RC0.022
CG11089CG11089 gene product from transcript CG11089-RD0.021
Gapdh1Glyceraldehyde 3 phosphate dehydrogenase 10.019
Snap25Synapse protein 250.019
ade3adenosine 30.018
CG33138CG33138 gene product from transcript CG33138-RA0.017
CG13890CG13890 gene product from transcript CG13890-RA0.017
CG5028CG5028 gene product from transcript CG5028-RB0.017
tutlturtle0.016
Sld5CG14549 gene product from transcript CG14549-RA0.016
myoglianinCG1838 gene product from transcript CG1838-RD0.016
Hsp60Heat shock protein 600.016
CG9238CG9238 gene product from transcript CG9238-RA0.016
l(2)06225lethal (2) 062250.015
eIF-4aEukaryotic initiation factor 4a0.015
CG18619CG18619 gene product from transcript CG18619-RD0.015
YetiCG40218 gene product from transcript CG40218-RA0.014
Act79BActin 79B0.014
bynbrachyenteron0.014
InvadolysinCG3953 gene product from transcript CG3953-RA0.014
Eip75BEcdysone-induced protein 75B0.013
vvermilion0.013
Aats-glnGlutaminyl-tRNA synthetase0.013
PpnPapilin0.013
CG3683CG3683 gene product from transcript CG3683-RC0.013
trpmCG34123 gene product from transcript CG34123-RG0.013
CG7145CG7145 gene product from transcript CG7145-RD0.013
CG10664CG10664 gene product from transcript CG10664-RB0.012
OscpOligomycin sensitivity-conferring protein0.012
RpS24Ribosomal protein S240.012
OatOrnithine aminotransferase precursor0.012
Elongin-BElongin B0.012
ferrochelataseCG2098 gene product from transcript CG2098-RC0.012
ninaBneither inactivation nor afterpotential B0.011
JhI-1Juvenile hormone-inducible protein 10.011
CG6638CG6638 gene product from transcript CG6638-RA0.011
CG7998CG7998 gene product from transcript CG7998-RA0.011
CG3776CG3776 gene product from transcript CG3776-RA0.011
CG9471CG9471 gene product from transcript CG9471-RB0.011
ND42NADH:ubiquinone reductase 42kD subunit precursor0.011
CG9399CG9399 gene product from transcript CG9399-RC0.011
timtimeless0.011
lamalamina ancestor0.011
NmdmcNAD-dependent methylenetetrahydrofolate dehydrogenase0.011
Vha16Vacuolar H[+] ATPase 16kD subunit0.011
RpS18Ribosomal protein S180.011
HmgsHMG Coenzyme A synthase0.010
nocno ocelli0.010
CG5010CG5010 gene product from transcript CG5010-RA0.010
ND75NADH:ubiquinone reductase 75kD subunit precursor0.010
Cyt-c-pCytochrome c proximal0.010
levyCG17280 gene product from transcript CG17280-RA0.010
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Homo sapiens
NameDescriptionProbabilityFunc Analog Organism
GPIglucose-6-phosphate isomerase0.498
ATP5BATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide0.347
ATP5A1ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle0.226
LDHAlactate dehydrogenase A0.178
UQCRC2ubiquinol-cytochrome c reductase core protein II0.150
PGAM1phosphoglycerate mutase 1 (brain)0.112
ATP5C1ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 10.103
PGK1phosphoglycerate kinase 10.100
GARTphosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase0.062
SLC25A3solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 30.061
SAMM50sorting and assembly machinery component 50 homolog (S. cerevisiae)0.060
UQCRC1ubiquinol-cytochrome c reductase core protein I0.060
COX5Acytochrome c oxidase subunit Va0.047
ENO1enolase 1, (alpha)0.044
NDUFB9NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa0.038
ESRRGestrogen-related receptor gamma0.037
CHCHD2coiled-coil-helix-coiled-coil-helix domain containing 20.037
ATP5HATP synthase, H+ transporting, mitochondrial Fo complex, subunit d0.037
GAPDHglyceraldehyde-3-phosphate dehydrogenase0.035
PPARGperoxisome proliferator-activated receptor gamma0.034
IMMTinner membrane protein, mitochondrial0.030
SLC25A5solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 50.029
COX8Acytochrome c oxidase subunit VIIIA (ubiquitous)0.029
SMYD1SET and MYND domain containing 10.027
COX4I1cytochrome c oxidase subunit IV isoform 10.027
MDH2malate dehydrogenase 2, NAD (mitochondrial)0.025
PRPS2phosphoribosyl pyrophosphate synthetase 20.025
GLO1glyoxalase I0.024
TPI1triosephosphate isomerase 10.023
KIFAP3kinesin-associated protein 30.022
AHCYadenosylhomocysteinase0.021
ENGendoglin0.016
HNF4Ahepatocyte nuclear factor 4, alpha0.015
UCK2uridine-cytidine kinase 20.014
PKM2pyruvate kinase, muscle0.014
PHB2prohibitin 20.013
NDUFB10NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa0.013
ATP5F1ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B10.013
NDUFB5NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa0.012
FSTL1follistatin-like 10.012
UQCRFS1ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 10.012
NDUFS3NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)0.012
PPIHpeptidylprolyl isomerase H (cyclophilin H)0.012
USP50ubiquitin specific peptidase 500.011
APEX1APEX nuclease (multifunctional DNA repair enzyme) 10.011
PSMG1proteasome (prosome, macropain) assembly chaperone 10.011
BCAT2branched chain amino-acid transaminase 2, mitochondrial0.011
POLE3polymerase (DNA directed), epsilon 3 (p17 subunit)0.011
OXA1Loxidase (cytochrome c) assembly 1-like0.011
ATIC5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase0.010
ECI1enoyl-CoA delta isomerase 10.010
LYPLA1lysophospholipase I0.010
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Rattus norvegicus
NameDescriptionProbabilityFunc Analog Organism
Gapdhglyceraldehyde-3-phosphate dehydrogenase0.544
Slc25a3solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 30.113
Phbprohibitin0.038
Atp5bATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide0.038
Aldoaaldolase A, fructose-bisphosphate0.036
Slc25a4solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 40.035
Uqcrc1ubiquinol-cytochrome c reductase core protein I0.025
Ldhalactate dehydrogenase A0.023
Cox4i1cytochrome c oxidase subunit IV isoform 10.021
Bsgbasigin0.019
Atp5a1ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle0.019
LOC100361879ATP synthase subunit epsilon, mitochondrial-like0.018
Tpi1triosephosphate isomerase 10.016
Eno1enolase 1, (alpha)0.015
Nolc1nucleolar and coiled-body phosphoprotein 10.013
Atp5oATP synthase, H+ transporting, mitochondrial F1 complex, O subunit0.013
Plaaphospholipase A2, activating protein0.012
Atp5g3ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)0.012
Mdh1malate dehydrogenase 1, NAD (soluble)0.012
Nphp1nephronophthisis 1 (juvenile) homolog (human)0.011
Aco2aconitase 2, mitochondrial0.011
Pgam1phosphoglycerate mutase 1 (brain)0.010
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Saccharomyces cerevisiae
NameDescriptionProbabilityFunc Analog Organism
ATP4Atp4p1.000
ATP1Atp1p0.993
ATP18Atp18p0.982
ATP20Atp20p0.951
ATP14Atp14p0.929
ATP5Atp5p0.880
PRS2Prs2p0.880
PRS4Prs4p0.741
PRS1Prs1p0.723
MTD1Mtd1p0.719
ATP7Atp7p0.647
ADE2Ade2p0.632
ATP16Atp16p0.591
INH1Inh1p0.588
ATP17Atp17p0.580
ADE12Ade12p0.511
ATP3Atp3p0.500
ATP2Atp2p0.494
TIM11Tim11p0.455
ATP15Atp15p0.400
QCR2Qcr2p0.386
PET9Pet9p0.247
URA4Ura4p0.230
ATP6Atp6p0.199
ISN1Isn1p0.186
ADE13Ade13p0.165
COX8Cox8p0.159
MIR1Mir1p0.154
ADE17Ade17p0.134
AIM24Aim24p0.125
NDE1Nde1p0.120
COX4Cox4p0.093
PRS3Prs3p0.084
ESF1Esf1p0.084
COX7Cox7p0.079
ADE1Ade1p0.078
COX9Cox9p0.066
ADE4Ade4p0.065
LEU5Leu5p0.057
URA2Ura2p0.056
HMF1Hmf1p0.054
ATP8Atp8p0.053
YIR035Chypothetical protein0.052
URA6Ura6p0.051
MDL2Mdl2p0.049
ADE6Ade6p0.048
HOR2Hor2p0.048
FSH1Fsh1p0.047
OLI1F0-ATP synthase subunit c (ATPase-associated proteolipid), encoded on the mitochondrial genome; mutation confers oligomycin resistance; expression is specifically dependent on the nuclear genes AEP1 and AEP20.046
ALD4Ald4p0.046
SRD1Srd1p0.045
PHO3Pho3p0.044
SHM2Shm2p0.044
YCL057C-Ahypothetical protein0.044
YPR117Whypothetical protein0.043
YLR264C-Ahypothetical protein0.041
FRS2Frs2p0.041
AGC1Agc1p0.040
IPP1Ipp1p0.039
LEU2Leu2p0.039
HPT1Hpt1p0.039
YDL241Whypothetical protein0.039
GYL1Gyl1p0.038
YLR162Whypothetical protein0.035
GRS1Grs1p0.035
YOL038C-Ahypothetical protein0.034
MSF1Msf1p0.033
YJL070Chypothetical protein0.032
UPS3Ups3p0.032
KNH1Knh1p0.032
SPS100Sps100p0.032
PHO13Pho13p0.032
HEM13Hem13p0.031
NUS1Nus1p0.031
YIR007Whypothetical protein0.031
AIM1Aim1p0.030
ICS2Ics2p0.029
HOHop0.029
YJR120Whypothetical protein0.029
YLR042Chypothetical protein0.029
ARP10Arp10p0.029
AAP1Aap1p0.029
IMD2Imd2p0.029
YBR013Chypothetical protein0.029
URA3Ura3p0.029
TAZ1Taz1p0.029
MER1Mer1p0.028
CPD1Cpd1p0.027
ZPS1Zps1p0.027
HXT3Hxt3p0.027
ARG8Arg8p0.027
AIM13Aim13p0.027
SPL2Spl2p0.027
GSP1Gsp1p0.026
YPL067Chypothetical protein0.026
FMT1Fmt1p0.026
YAR068Whypothetical protein0.025
COX13Cox13p0.025
TIM8Tim8p0.025
ASP1Asp1p0.025