Process View
The network for 'regulation of dna templated transcription initiation' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.
Any process that modulates the frequency, rate or extent of DNA-templated transcription initiation.
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
SPT16 | Spt16p | 0.820 | |
NGG1 | Ngg1p | 0.362 | |
SPT5 | Spt5p | 0.300 | |
RPN2 | Rpn2p | 0.283 | |
RPT6 | Rpt6p | 0.267 | |
RPN1 | Rpn1p | 0.232 | |
CHD1 | Chd1p | 0.227 | |
CTR9 | Ctr9p | 0.197 | |
MOT1 | Mot1p | 0.191 | |
RSC4 | Rsc4p | 0.175 | |
SPT6 | Spt6p | 0.170 | |
RPT2 | Rpt2p | 0.153 | |
RTF1 | Rtf1p | 0.147 | |
RPN6 | Rpn6p | 0.119 | |
RPT1 | Rpt1p | 0.118 | |
TRA1 | Tra1p | 0.111 | |
RPT4 | Rpt4p | 0.108 | |
TAF6 | Taf6p | 0.106 | |
BUR6 | Bur6p | 0.103 | |
RFA1 | Rfa1p | 0.101 | |
SKI3 | Ski3p | 0.089 | |
RPN9 | Rpn9p | 0.079 | |
SET2 | Set2p | 0.075 | |
RPN7 | Rpn7p | 0.070 | |
TAF12 | Taf12p | 0.064 | |
TIF4632 | Tif4632p | 0.060 | |
LSM4 | Lsm4p | 0.059 | |
SUS1 | Sus1p | 0.058 | |
HHT1 | Hht1p | 0.057 | |
RAD23 | Rad23p | 0.057 | |
CKA1 | Cka1p | 0.056 | |
CKB1 | Ckb1p | 0.051 | |
POB3 | Pob3p | 0.050 | |
DCP1 | Dcp1p | 0.049 | |
ADA2 | Ada2p | 0.045 | |
IOC3 | Ioc3p | 0.045 | |
WWM1 | Wwm1p | 0.043 | |
INO80 | Ino80p | 0.042 | |
SRD1 | Srd1p | 0.041 | |
TAF5 | Taf5p | 0.040 | |
ECM29 | Ecm29p | 0.040 | |
LEU2 | Leu2p | 0.039 | |
YLR264C-A | hypothetical protein | 0.038 | |
TFA1 | Tfa1p | 0.037 | |
RSC8 | Rsc8p | 0.037 | |
YLR162W | hypothetical protein | 0.035 | |
TFG1 | Tfg1p | 0.035 | |
YOL038C-A | hypothetical protein | 0.035 | |
STH1 | Sth1p | 0.035 | |
RPN3 | Rpn3p | 0.034 | |
HXT3 | Hxt3p | 0.033 | |
BEM2 | Bem2p | 0.033 | |
ESF1 | Esf1p | 0.032 | |
YIL151C | hypothetical protein | 0.032 | |
MF(ALPHA)2 | Mf(alpha)2p | 0.032 | |
TAF10 | Taf10p | 0.032 | |
MER1 | Mer1p | 0.032 | |
SWI1 | Swi1p | 0.032 | |
ARP10 | Arp10p | 0.031 | |
SPL2 | Spl2p | 0.031 | |
RPN10 | Rpn10p | 0.030 | |
ARG8 | Arg8p | 0.030 | |
URA3 | Ura3p | 0.030 | |
RPT5 | Rpt5p | 0.030 | |
SGT2 | Sgt2p | 0.030 | |
YLR419W | hypothetical protein | 0.029 | |
DLS1 | Dls1p | 0.029 | |
CHA1 | Cha1p | 0.028 | |
SEM1 | Sem1p | 0.028 | |
YGR017W | hypothetical protein | 0.028 | |
YPR157W | hypothetical protein | 0.028 | |
YAR068W | hypothetical protein | 0.028 | |
YLR042C | hypothetical protein | 0.027 | |
TFG2 | Tfg2p | 0.027 | |
HO | Hop | 0.027 | |
MF(ALPHA)1 | Mf(alpha)1p | 0.027 | |
PRS2 | Prs2p | 0.026 | |
ATP6 | Atp6p | 0.026 | |
ITC1 | Itc1p | 0.026 | |
SCM4 | Scm4p | 0.025 | |
MCM6 | Mcm6p | 0.025 | |
HPF1 | Hpf1p | 0.025 | |
YBR013C | hypothetical protein | 0.024 | |
CUP1-1 | Cup1-1p | 0.024 | |
AUA1 | Aua1p | 0.024 | |
IOC2 | Ioc2p | 0.024 | |
FMT1 | Fmt1p | 0.024 | |
AQY2 | Aqy2p | 0.024 | |
ZPS1 | Zps1p | 0.024 | |
PHM6 | Phm6p | 0.023 | |
REB1 | Reb1p | 0.023 | |
RSC58 | Rsc58p | 0.023 | |
YOL013W-A | hypothetical protein | 0.023 | |
PRE10 | Pre10p | 0.022 | |
DIC1 | Dic1p | 0.022 | |
TYE7 | Tye7p | 0.022 | |
LEO1 | Leo1p | 0.021 | |
OPT2 | Opt2p | 0.021 | |
RCO1 | Rco1p | 0.021 | |
SPT15 | Spt15p | 0.021 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
mRpL49 | mitochondrial ribosomal protein L49 | 0.011 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
PSMD2 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 | 0.616 | |
PSMC1 | proteasome (prosome, macropain) 26S subunit, ATPase, 1 | 0.451 | |
LEO1 | Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) | 0.400 | |
PSMC3 | proteasome (prosome, macropain) 26S subunit, ATPase, 3 | 0.269 | |
PSMD4 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 | 0.246 | |
TBP | TATA box binding protein | 0.238 | |
SMAD4 | SMAD family member 4 | 0.220 | |
PSMD13 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 | 0.205 | |
PSMD6 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 | 0.175 | |
NCOA6 | nuclear receptor coactivator 6 | 0.155 | |
PSMD7 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 | 0.144 | |
SP1 | Sp1 transcription factor | 0.102 | |
DCP1A | DCP1 decapping enzyme homolog A (S. cerevisiae) | 0.099 | |
SKIL | SKI-like oncogene | 0.092 | |
CDC73 | cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) | 0.084 | |
TBX5 | T-box 5 | 0.082 | |
CTR9 | Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) | 0.080 | |
SMC1A | structural maintenance of chromosomes 1A | 0.070 | |
HMGB2 | high mobility group box 2 | 0.067 | |
PSMD11 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 | 0.064 | |
CREBBP | CREB binding protein | 0.060 | |
TAF1 | TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa | 0.055 | |
SMC3 | structural maintenance of chromosomes 3 | 0.054 | |
RAD21 | RAD21 homolog (S. pombe) | 0.046 | |
NCOA1 | nuclear receptor coactivator 1 | 0.044 | |
NCOR1 | nuclear receptor corepressor 1 | 0.042 | |
MED25 | mediator complex subunit 25 | 0.040 | |
TAF4 | TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa | 0.040 | |
RB1 | retinoblastoma 1 | 0.038 | |
SSRP1 | structure specific recognition protein 1 | 0.037 | |
ESR1 | estrogen receptor 1 | 0.037 | |
PSMD10 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 | 0.037 | |
PSMC5 | proteasome (prosome, macropain) 26S subunit, ATPase, 5 | 0.035 | |
USP14 | ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) | 0.035 | |
SMAD9 | SMAD family member 9 | 0.033 | |
RBM25 | RNA binding motif protein 25 | 0.030 | |
RTF1 | Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) | 0.029 | |
MKL1 | megakaryoblastic leukemia (translocation) 1 | 0.029 | |
RXRA | retinoid X receptor, alpha | 0.029 | |
ARNT | aryl hydrocarbon receptor nuclear translocator | 0.025 | |
TAF5 | TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa | 0.024 | |
BAZ1A | bromodomain adjacent to zinc finger domain, 1A | 0.023 | |
PSMD9 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 | 0.021 | |
NCOR2 | nuclear receptor corepressor 2 | 0.021 | |
PSMC4 | proteasome (prosome, macropain) 26S subunit, ATPase, 4 | 0.020 | |
HMGA1 | high mobility group AT-hook 1 | 0.020 | |
SIRT1 | sirtuin 1 | 0.020 | |
NUP153 | nucleoporin 153kDa | 0.019 | |
HNRNPA2B1 | heterogeneous nuclear ribonucleoprotein A2/B1 | 0.019 | |
NBN | nibrin | 0.018 | |
PAF1 | Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) | 0.017 | |
HMGB1 | high mobility group box 1 | 0.017 | |
DEK | DEK oncogene | 0.016 | |
HDAC3 | histone deacetylase 3 | 0.016 | |
XRCC6 | X-ray repair complementing defective repair in Chinese hamster cells 6 | 0.015 | |
TRIM33 | tripartite motif containing 33 | 0.015 | |
SMAD2 | SMAD family member 2 | 0.015 | |
RSRC2 | arginine/serine-rich coiled-coil 2 | 0.014 | |
DCP1B | DCP1 decapping enzyme homolog B (S. cerevisiae) | 0.014 | |
PSMC2 | proteasome (prosome, macropain) 26S subunit, ATPase, 2 | 0.014 | |
SNW1 | SNW domain containing 1 | 0.014 | |
TAF2 | TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa | 0.014 | |
HTT | huntingtin | 0.013 | |
KAT2B | K(lysine) acetyltransferase 2B | 0.013 | |
PSIP1 | PC4 and SFRS1 interacting protein 1 | 0.013 | |
WAPAL | wings apart-like homolog (Drosophila) | 0.013 | |
SFPQ | splicing factor proline/glutamine-rich | 0.012 | |
NR3C1 | nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) | 0.012 | |
E2F3 | E2F transcription factor 3 | 0.012 | |
LBR | lamin B receptor | 0.012 | |
PRPF4B | PRP4 pre-mRNA processing factor 4 homolog B (yeast) | 0.012 | |
BCLAF1 | BCL2-associated transcription factor 1 | 0.012 | |
SMAD3 | SMAD family member 3 | 0.011 | |
KLHL24 | kelch-like 24 (Drosophila) | 0.011 | |
C10orf18 | chromosome 10 open reading frame 18 | 0.011 | |
ZNF518A | zinc finger protein 518A | 0.011 | |
CHD1 | chromodomain helicase DNA binding protein 1 | 0.011 | |
HIF1A | hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) | 0.011 | |
SCAF8 | SR-related CTD-associated factor 8 | 0.011 | |
BAZ1B | bromodomain adjacent to zinc finger domain, 1B | 0.011 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
Pax2 | paired box gene 2 | 0.694 | |
Fgf8 | fibroblast growth factor 8 | 0.659 | |
Shh | sonic hedgehog | 0.561 | |
Psmd4 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 | 0.512 | |
Gata4 | GATA binding protein 4 | 0.506 | |
Gli2 | GLI-Kruppel family member GLI2 | 0.355 | |
Wnt3a | wingless-related MMTV integration site 3A | 0.323 | |
Gli3 | GLI-Kruppel family member GLI3 | 0.295 | |
Pax8 | paired box gene 8 | 0.285 | |
Hand2 | heart and neural crest derivatives expressed transcript 2 | 0.274 | |
Sox9 | SRY-box containing gene 9 | 0.263 | |
Nog | noggin | 0.253 | |
Ptpn11 | protein tyrosine phosphatase, non-receptor type 11 | 0.244 | |
Rxra | retinoid X receptor alpha | 0.228 | |
Foxc1 | forkhead box C1 | 0.175 | |
Lhx1 | LIM homeobox protein 1 | 0.167 | |
Hand1 | heart and neural crest derivatives expressed transcript 1 | 0.160 | |
Vax1 | ventral anterior homeobox containing gene 1 | 0.143 | |
Fgfr2 | fibroblast growth factor receptor 2 | 0.140 | |
Tbx1 | T-box 1 | 0.114 | |
Wnt4 | wingless-related MMTV integration site 4 | 0.110 | |
Barx2 | BarH-like homeobox 2 | 0.104 | |
Pitx2 | paired-like homeodomain transcription factor 2 | 0.098 | |
Hoxd13 | homeobox D13 | 0.090 | |
Nkx2-5 | NK2 transcription factor related, locus 5 (Drosophila) | 0.087 | |
Psmb9 | proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) | 0.087 | |
Nkx6-1 | NK6 homeobox 1 | 0.087 | |
Rarg | retinoic acid receptor, gamma | 0.083 | |
Psmb8 | proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) | 0.079 | |
Rarb | retinoic acid receptor, beta | 0.077 | |
Ror2 | receptor tyrosine kinase-like orphan receptor 2 | 0.075 | |
Dkk1 | dickkopf homolog 1 (Xenopus laevis) | 0.068 | |
Usp18 | ubiquitin specific peptidase 18 | 0.065 | |
Wnt6 | wingless-related MMTV integration site 6 | 0.062 | |
Cct7 | chaperonin containing Tcp1, subunit 7 (eta) | 0.061 | |
Hoxa13 | homeobox A13 | 0.059 | |
Hoxd11 | homeobox D11 | 0.058 | |
Stat2 | signal transducer and activator of transcription 2 | 0.054 | |
Lhx3 | LIM homeobox protein 3 | 0.053 | |
Gdnf | glial cell line derived neurotrophic factor | 0.049 | |
Ctnnb1 | catenin (cadherin associated protein), beta 1 | 0.047 | |
Gata6 | GATA binding protein 6 | 0.047 | |
Rela | v-rel reticuloendotheliosis viral oncogene homolog A (avian) | 0.046 | |
Tbx3 | T-box 3 | 0.045 | |
Scaf11 | SR-related CTD-associated factor 11 | 0.044 | |
Nr5a1 | nuclear receptor subfamily 5, group A, member 1 | 0.042 | |
Mesp1 | mesoderm posterior 1 | 0.042 | |
Gata5 | GATA binding protein 5 | 0.042 | |
Trp63 | transformation related protein 63 | 0.040 | |
Tbx5 | T-box 5 | 0.040 | |
Emx2 | empty spiracles homolog 2 (Drosophila) | 0.040 | |
Barx1 | BarH-like homeobox 1 | 0.039 | |
T | brachyury | 0.039 | |
Foxc2 | forkhead box C2 | 0.039 | |
Tap2 | transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) | 0.038 | |
Myl2 | myosin, light polypeptide 2, regulatory, cardiac, slow | 0.038 | |
Emx1 | empty spiracles homolog 1 (Drosophila) | 0.038 | |
Uba7 | ubiquitin-like modifier activating enzyme 7 | 0.037 | |
Otx2 | orthodenticle homolog 2 (Drosophila) | 0.037 | |
Efna4 | ephrin A4 | 0.036 | |
Lmx1a | LIM homeobox transcription factor 1 alpha | 0.035 | |
Tapbp | TAP binding protein | 0.034 | |
En1 | engrailed 1 | 0.034 | |
Suz12 | suppressor of zeste 12 homolog (Drosophila) | 0.033 | |
Isg15 | ISG15 ubiquitin-like modifier | 0.033 | |
Rara | retinoic acid receptor, alpha | 0.033 | |
Tgfb2 | transforming growth factor, beta 2 | 0.032 | |
Zfpm2 | zinc finger protein, multitype 2 | 0.032 | |
Pax1 | paired box gene 1 | 0.032 | |
Otx1 | orthodenticle homolog 1 (Drosophila) | 0.032 | |
Foxe1 | forkhead box E1 | 0.032 | |
Nfkb2 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100 | 0.031 | |
Fgf3 | fibroblast growth factor 3 | 0.031 | |
Ntf3 | neurotrophin 3 | 0.031 | |
Wnt2b | wingless related MMTV integration site 2b | 0.030 | |
Socs1 | suppressor of cytokine signaling 1 | 0.030 | |
Irf7 | interferon regulatory factor 7 | 0.030 | |
Pthlh | parathyroid hormone-like peptide | 0.029 | |
Ihh | Indian hedgehog | 0.029 | |
Tbx2 | T-box 2 | 0.028 | |
Bmp7 | bone morphogenetic protein 7 | 0.028 | |
Nkx3-2 | NK3 homeobox 2 | 0.028 | |
Pitx1 | paired-like homeodomain transcription factor 1 | 0.027 | |
Kl | klotho | 0.027 | |
Irgm1 | immunity-related GTPase family M member 1 | 0.027 | |
Amh | anti-Mullerian hormone | 0.026 | |
Col2a1 | collagen, type II, alpha 1 | 0.026 | |
Ar | androgen receptor | 0.026 | |
Batf3 | basic leucine zipper transcription factor, ATF-like 3 | 0.025 | |
Gli1 | GLI-Kruppel family member GLI1 | 0.025 | |
Tcf21 | transcription factor 21 | 0.024 | |
Lmx1b | LIM homeobox transcription factor 1 beta | 0.024 | |
Igtp | interferon gamma induced GTPase | 0.023 | |
Wnt10b | wingless related MMTV integration site 10b | 0.023 | |
Cdx1 | caudal type homeobox 1 | 0.023 | |
Hmx3 | H6 homeobox 3 | 0.023 | |
Bmpr1a | bone morphogenetic protein receptor, type 1A | 0.022 | |
Six5 | sine oculis-related homeobox 5 homolog (Drosophila) | 0.022 | |
Foxa2 | forkhead box A2 | 0.022 | |
Efnb2 | ephrin B2 | 0.022 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
Psmc1 | proteasome (prosome, macropain) 26S subunit, ATPase, 1 | 0.089 | |
Psmc2 | proteasome (prosome, macropain) 26S subunit, ATPase 2 | 0.040 | |
Psmc5 | proteasome (prosome, macropain) 26S subunit, ATPase, 5 | 0.034 | |
Psmd2 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 | 0.020 |