The network for 'maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna ' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

maturation of ssu rrna from tricistronic rrna transcript ssu rrna 5 8s rrna lsu rrna

Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.

NameDescriptionProbabilityFunc Analog Organism
KRR1Krr1p1.000
NOP1Nop1p0.999
ENP1Enp1p0.999
NOP14Nop14p0.999
BFR2Bfr2p0.998
PWP2Pwp2p0.998
FAF1Faf1p0.998
KRE33Kre33p0.994
MPP10Mpp10p0.993
NOP56Nop56p0.992
UTP10Utp10p0.991
NOC4Noc4p0.988
RIO2Rio2p0.988
UTP4Utp4p0.987
UTP22Utp22p0.986
RPS14ARps14ap0.983
DIP2Dip2p0.983
BMS1Bms1p0.982
SLX9Slx9p0.981
ENP2Enp2p0.981
MRD1Mrd1p0.975
UTP11Utp11p0.973
UTP18Utp18p0.966
RPS9BRps9bp0.961
UTP7Utp7p0.957
SOF1Sof1p0.953
UTP6Utp6p0.951
UTP9Utp9p0.948
UTP25Utp25p0.948
RRP9Rrp9p0.948
NOP58Nop58p0.943
UTP8Utp8p0.942
TSR1Tsr1p0.938
RPS7ARps7ap0.933
ECM16Ecm16p0.917
IMP3Imp3p0.912
RPS5Rps5p0.910
RPS4ARps4ap0.907
NOB1Nob1p0.903
PXR1Pxr1p0.901
KRI1Kri1p0.895
EMG1Emg1p0.885
UTP13Utp13p0.884
RPS18ARps18ap0.881
RRP36Rrp36p0.874
BUD21Bud21p0.864
SAS10Sas10p0.861
ESF1Esf1p0.855
UTP15Utp15p0.843
RPS18BRps18bp0.835
ESF2Esf2p0.825
RPS0ARps0ap0.818
RPS11BRps11bp0.815
NAN1Nan1p0.808
UTP21Utp21p0.798
RRP12Rrp12p0.775
PNO1Pno1p0.770
UTP20Utp20p0.762
UTP23Utp23p0.755
RPS10BRps10bp0.753
RPS1BRps1bp0.744
NOP6Nop6p0.719
CMS1Cms1p0.718
RPS3Rps3p0.712
CDC33Cdc33p0.710
RRP5Rrp5p0.703
RIO1Rio1p0.636
RRP7Rrp7p0.636
UTP30Utp30p0.631
RPS17ARps17ap0.623
RPS17BRps17bp0.616
RRP14Rrp14p0.610
IMP4Imp4p0.603
ROK1Rok1p0.588
RPL12ARpl12ap0.579
DBP8Dbp8p0.576
RCL1Rcl1p0.559
GAR1Gar1p0.548
LCP5Lcp5p0.538
SUI1Sui1p0.526
RPS13Rps13p0.525
RPS24BRps24bp0.525
RPS11ARps11ap0.512
PRP43Prp43p0.502
ASC1Asc1p0.501
DIM1Dim1p0.476
LTV1Ltv1p0.460
RPS24ARps24ap0.438
EBP2Ebp2p0.432
BCD1Bcd1p0.417
PRS3Prs3p0.396
NOP8Nop8p0.393
RPS6BRps6bp0.354
UTP14Utp14p0.341
LRP1Lrp1p0.340
NOP12Nop12p0.299
TRM112Trm112p0.290
RPS9ARps9ap0.287
FCF1Fcf1p0.286
RPS4BRps4bp0.283
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Caenorhabditis elegans
NameDescriptionProbabilityFunc Analog Organism
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Danio rerio
NameDescriptionProbabilityFunc Analog Organism
bop1block of proliferation 10.823
wdr46WD repeat domain 460.701
utp15utp15, U3 small nucleolar ribonucleoprotein, homolog0.655
rps15aribosomal protein S15a0.650
rrp1ribosomal RNA processing 1 homolog (S. cerevisiae)0.568
nop14NOP14 nucleolar protein homolog (yeast)0.565
rps3aribosomal protein S3A0.531
ddx18DEAD (Asp-Glu-Ala-Asp) box polypeptide 180.511
diexfdigestive organ expansion factor homolog0.500
rps5ribosomal protein S50.499
polr1apolymerase (RNA) I polypeptide A0.473
rps11ribosomal protein S110.468
im:7148292im:71482920.464
gnl3guanine nucleotide binding protein-like 3 (nucleolar)0.454
rpl13ribosomal protein L130.440
mibmind bomb0.423
eif3meukaryotic translation initiation factor 3, subunit M0.415
noc3lnucleolar complex associated 3 homolog (S. cerevisiae)0.411
rpl7ribosomal protein L70.393
rps29ribosomal protein S290.389
rps15ribosomal protein S150.388
tbl3transducin (beta)-like 30.380
pespescadillo0.376
nsun5NOP2/Sun domain family, member 50.375
rps8aribosomal protein S8a0.369
rpl10aribosomal protein L10a0.368
med12mediator of RNA polymerase II transcription, subunit 12 homolog0.364
wdr75WD repeat domain 750.353
ddx27DEAD (Asp-Glu-Ala-Asp) box polypeptide 270.350
zgc:109888zgc:1098880.334
rpl11ribosomal protein L110.331
surf6surfeit 60.318
rpl36aribosomal protein L36A0.314
rpl30ribosomal protein L300.313
rps12ribosomal protein S120.309
rps3ribosomal protein S30.305
rps10ribosomal protein S100.298
zgc:92872zgc:928720.297
byslbystin-like0.288
nop58NOP58 ribonucleoprotein homolog (yeast)0.271
rps7ribosomal protein S70.268
umpsuridine monophosphate synthetase0.266
etf1eukaryotic translation termination factor 10.260
rpl5bribosomal protein L5b0.251
rps18ribosomal protein S180.249
rpsaribosomal protein SA0.243
ruvbl2RuvB-like 2 (E. coli)0.217
rpl5aribosomal protein L5a0.211
zgc:110084zgc:1100840.210
mki67ipmki67 (FHA domain) interacting nucleolar phosphoprotein (human)0.201
nola1nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs)0.190
si:dkey-91i17.1si:dkey-91i17.10.185
polr1epolymerase (RNA) I polypeptide E0.178
eif3geukaryotic translation initiation factor 3, subunit G0.178
tsr1TSR1, 20S rRNA accumulation, homolog (yeast)0.177
prmt7protein arginine N-methyltransferase 70.176
zgc:123327zgc:1233270.176
wdr36WD repeat domain 360.173
pprc1peroxisome proliferator-activated receptor gamma, coactivator-related 10.151
tp53tumor protein p530.151
polr1bpolymerase (RNA) I polypeptide B0.150
rps25ribosomal protein S250.141
eif3s2eukaryotic translation initiation factor 3, subunit 2 beta0.140
noc4lnucleolar complex associated 4 homolog (S. cerevisiae)0.139
eif3deukaryotic translation initiation factor 3, subunit D0.139
tsr2TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)0.138
fauaFinkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a0.133
rrp15ribosomal RNA processing 15 homolog (S. cerevisiae)0.132
fblfibrillarin0.129
nip7nuclear import 7 homolog (S. cerevisiae)0.126
utp6UTP6, small subunit (SSU) processome component, homolog (yeast)0.124
prp19PRP19/PSO4 homolog (S. cerevisiae)0.120
rsl24d1ribosomal L24 domain containing 10.115
zgc:56683zgc:566830.114
rplp0ribosomal protein, large, P00.114
riok2RIO kinase 2 (yeast)0.111
rps26ribosomal protein S260.111
dohhdeoxyhypusine hydroxylase/monooxygenase0.107
rpl36ribosomal protein L360.104
rpl10ribosomal protein L100.103
nhp2NHP2 ribonucleoprotein homolog (yeast)0.103
rpl35ribosomal protein L350.102
dhx16DEAH (Asp-Glu-Ala-His) box polypeptide 160.100
rpl12ribosomal protein L120.100
rpl26ribosomal protein L260.100
rpl7aribosomal protein L7a0.098
rps21ribosomal protein S210.096
akap1bA kinase (PRKA) anchor protein 1b0.094
cct6achaperonin containing TCP1, subunit 6A (zeta 1)0.092
eef1geukaryotic translation elongation factor 1 gamma0.092
rps4xribosomal protein S4, X-linked0.091
rcl1RNA terminal phosphate cyclase-like 10.086
rpl27ribosomal protein L270.084
utp11lUTP11-like, U3 small nucleolar ribonucleoprotein (yeast)0.082
wdr12WD repeat domain 120.082
btf3basic transcription factor 30.081
ddx39bDEAD (Asp-Glu-Ala-Asp) box polypeptide 39b0.079
pa2g4aproliferation-associated 2G4, a0.079
eif3s6ipeukaryotic translation initiation factor 3, subunit 6 interacting protein0.078
apcadenomatosis polyposis coli0.076
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Drosophila melanogaster
NameDescriptionProbabilityFunc Analog Organism
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Homo sapiens
NameDescriptionProbabilityFunc Analog Organism
RPS14ribosomal protein S140.986
RPS4Xribosomal protein S4, X-linked0.983
RPS3ribosomal protein S30.961
RPS16ribosomal protein S160.906
FTSJ3FtsJ homolog 3 (E. coli)0.833
DDX21DEAD (Asp-Glu-Ala-Asp) box polypeptide 210.806
NOLC1nucleolar and coiled-body phosphoprotein 10.794
MAK16MAK16 homolog (S. cerevisiae)0.783
RPS11ribosomal protein S110.691
MKI67IPMKI67 (FHA domain) interacting nucleolar phosphoprotein0.687
C10orf2chromosome 10 open reading frame 20.685
RPL37Aribosomal protein L37a0.682
POLR1Cpolymerase (RNA) I polypeptide C, 30kDa0.609
WDR3WD repeat domain 30.600
RPS3Aribosomal protein S3A0.562
PPRC1peroxisome proliferator-activated receptor gamma, coactivator-related 10.557
RPS18ribosomal protein S180.530
HEATR1HEAT repeat containing 10.491
RPS15Aribosomal protein S15a0.481
CEBPZCCAAT/enhancer binding protein (C/EBP), zeta0.455
RPS25ribosomal protein S250.450
WDR74WD repeat domain 740.445
RPS5ribosomal protein S50.443
HSPH1heat shock 105kDa/110kDa protein 10.438
RPS28ribosomal protein S280.431
WDR43WD repeat domain 430.428
RPS12ribosomal protein S120.426
BYSLbystin-like0.419
RPS15ribosomal protein S150.415
TRMT1TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)0.407
EIF5Beukaryotic translation initiation factor 5B0.393
UTP14AUTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)0.389
NSUN2NOP2/Sun domain family, member 20.378
RPS13ribosomal protein S130.370
RPS10ribosomal protein S100.364
RPS8ribosomal protein S80.362
RPL9ribosomal protein L90.352
RPS6ribosomal protein S60.345
RPS29ribosomal protein S290.323
G3BP1GTPase activating protein (SH3 domain) binding protein 10.297
RPS17ribosomal protein S170.281
TGS1trimethylguanosine synthase 10.281
RRP9ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)0.276
EIF3Beukaryotic translation initiation factor 3, subunit B0.256
URB2URB2 ribosome biogenesis 2 homolog (S. cerevisiae)0.246
CCDC86coiled-coil domain containing 860.228
RPS2ribosomal protein S20.219
RPS24ribosomal protein S240.209
RPF2ribosome production factor 2 homolog (S. cerevisiae)0.205
GCN1L1GCN1 general control of amino-acid synthesis 1-like 1 (yeast)0.205
RPS23ribosomal protein S230.204
UTP15UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)0.192
NOL11nucleolar protein 110.186
RPL27Aribosomal protein L27a0.182
RRS1RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)0.177
RPL27ribosomal protein L270.177
RPSAribosomal protein SA0.174
GNL3guanine nucleotide binding protein-like 3 (nucleolar)0.173
NOP14NOP14 nucleolar protein homolog (yeast)0.171
RIOK1RIO kinase 1 (yeast)0.171
RPLP2ribosomal protein, large, P20.170
DPH2DPH2 homolog (S. cerevisiae)0.168
GNL2guanine nucleotide binding protein-like 2 (nucleolar)0.167
MPHOSPH10M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)0.159
EIF2S1eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa0.159
NAT10N-acetyltransferase 10 (GCN5-related)0.157
NOC3Lnucleolar complex associated 3 homolog (S. cerevisiae)0.155
RRP15ribosomal RNA processing 15 homolog (S. cerevisiae)0.153
EIF3Deukaryotic translation initiation factor 3, subunit D0.148
DNTTIP2deoxynucleotidyltransferase, terminal, interacting protein 20.147
WDR75WD repeat domain 750.147
RPL18ribosomal protein L180.140
PPANpeter pan homolog (Drosophila)0.137
NOP2NOP2 nucleolar protein homolog (yeast)0.135
RPS27ribosomal protein S270.134
IPO4importin 40.128
PUS7pseudouridylate synthase 7 homolog (S. cerevisiae)0.124
BMS1BMS1 homolog, ribosome assembly protein (yeast)0.123
BOP1block of proliferation 10.120
NUFIP1nuclear fragile X mental retardation protein interacting protein 10.116
RPL21ribosomal protein L210.115
NOC4Lnucleolar complex associated 4 homolog (S. cerevisiae)0.113
PDCD11programmed cell death 110.113
WDR46WD repeat domain 460.112
MAGOHmago-nashi homolog, proliferation-associated (Drosophila)0.105
RPS20ribosomal protein S200.100
RPP40ribonuclease P/MRP 40kDa subunit0.098
PTRH2peptidyl-tRNA hydrolase 20.097
RPLP1ribosomal protein, large, P10.094
KIAA0020KIAA00200.092
GTPBP4GTP binding protein 40.091
ESF1ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)0.090
RPS21ribosomal protein S210.090
U2SURPU2 snRNP-associated SURP domain containing0.089
SHQ1SHQ1 homolog (S. cerevisiae)0.088
PITPNBphosphatidylinositol transfer protein, beta0.086
TSR1TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)0.084
DIEXFdigestive organ expansion factor homolog (zebrafish)0.083
PUS1pseudouridylate synthase 10.082
WDR12WD repeat domain 120.081
Loading network...
Mus musculus
NameDescriptionProbabilityFunc Analog Organism
Gnl3guanine nucleotide binding protein-like 3 (nucleolar)0.428
Rrp1bribosomal RNA processing 1 homolog B (S. cerevisiae)0.177
Ddx21DEAD (Asp-Glu-Ala-Asp) box polypeptide 210.157
Tsr1TSR1, 20S rRNA accumulation, homolog (yeast)0.143
CebpzCCAAT/enhancer binding protein zeta0.138
Nop2NOP2 nucleolar protein homolog (yeast)0.096
Eedembryonic ectoderm development0.095
Fam203afamily with sequence similarity 203, member A0.067
Mybbp1aMYB binding protein (P160) 1a0.060
Dnttip2deoxynucleotidyltransferase, terminal, interacting protein 20.056
Cirh1acirrhosis, autosomal recessive 1A (human)0.056
Mki67ipMki67 (FHA domain) interacting nucleolar phosphoprotein0.054
Wdr74WD repeat domain 740.053
Grwd1glutamate-rich WD repeat containing 10.048
Rpl26ribosomal protein L260.047
Abt1activator of basal transcription 10.045
Gltscr2glioma tumor suppressor candidate region gene 20.044
Ddx10DEAD (Asp-Glu-Ala-Asp) box polypeptide 100.041
Utp20UTP20, small subunit (SSU) processome component, homolog (yeast)0.040
Mak16MAK16 homolog (S. cerevisiae)0.040
Rpl36aribosomal protein L36A0.038
Pwp1PWP1 homolog (S. cerevisiae)0.037
Polr1apolymerase (RNA) I polypeptide A0.036
Etf1eukaryotic translation termination factor 10.036
Rrp15ribosomal RNA processing 15 homolog (S. cerevisiae)0.035
Rpl14ribosomal protein L140.034
Spata5spermatogenesis associated 50.034
Ddx20DEAD (Asp-Glu-Ala-Asp) box polypeptide 200.032
Nufip1nuclear fragile X mental retardation protein interacting protein 10.029
Dis3DIS3 mitotic control homolog (S. cerevisiae)0.029
Eif2s2eukaryotic translation initiation factor 2, subunit 2 (beta)0.028
Ltv1LTV1 homolog (S. cerevisiae)0.028
Ccdc86coiled-coil domain containing 860.028
Plrg1pleiotropic regulator 1, PRL1 homolog (Arabidopsis)0.027
Nubp2nucleotide binding protein 20.027
Noc4lnucleolar complex associated 4 homolog (S. cerevisiae)0.026
Ighimmunoglobulin heavy chain complex0.026
Naa15N(alpha)-acetyltransferase 15, NatA auxiliary subunit0.026
Rrp12ribosomal RNA processing 12 homolog (S. cerevisiae)0.024
Wdr75WD repeat domain 750.024
Pdcd11programmed cell death 110.023
Rrp8ribosomal RNA processing 8, methyltransferase, homolog (yeast)0.023
Pwp2PWP2 periodic tryptophan protein homolog (yeast)0.023
Tex10testis expressed gene 100.023
Ppanpeter pan homolog (Drosophila)0.022
Exosc10exosome component 100.022
Rpl22ribosomal protein L220.022
Ppp2r2aprotein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform0.022
Polr1bpolymerase (RNA) I polypeptide B0.022
Rpsaribosomal protein SA0.021
Orc2origin recognition complex, subunit 20.021
Brix1BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)0.020
Sdad1SDA1 domain containing 10.020
Gnl2guanine nucleotide binding protein-like 2 (nucleolar)0.020
Rrp9RRP9, small subunit (SSU) processome component, homolog (yeast)0.020
TwistnbTWIST neighbor0.020
Rps25ribosomal protein S250.019
2610027L16RikRIKEN cDNA 2610027L16 gene0.019
Tbrg4transforming growth factor beta regulated gene 40.019
Noc3lnucleolar complex associated 3 homolog (S. cerevisiae)0.019
Gtpbp4GTP binding protein 40.019
Nop14NOP14 nucleolar protein homolog (yeast)0.018
Rpl23ribosomal protein L230.017
Smyd5SET and MYND domain containing 50.017
Fblfibrillarin0.017
Pus7lpseudouridylate synthase 7 homolog (S. cerevisiae)-like0.016
Rpl27aribosomal protein L27A0.016
Nip7nuclear import 7 homolog (S. cerevisiae)0.016
Eif1aeukaryotic translation initiation factor 1A0.016
Pprc1peroxisome proliferative activated receptor, gamma, coactivator-related 10.016
Wdr46WD repeat domain 460.016
Wdr43WD repeat domain 430.015
Wdr5WD repeat domain 50.015
Dph2DPH2 homolog (S. cerevisiae)0.015
Ngdnneuroguidin, EIF4E binding protein0.015
Rpl13aribosomal protein L13A0.014
Rpl21ribosomal protein L210.014
Wdr36WD repeat domain 360.014
Ddx18DEAD (Asp-Glu-Ala-Asp) box polypeptide 180.014
Elac2elaC homolog 2 (E. coli)0.014
Rpl41ribosomal protein L410.014
Smn1survival motor neuron 10.014
Rpl11ribosomal protein L110.014
Utp18UTP18, small subunit (SSU) processome component, homolog (yeast)0.013
Xpo5exportin 50.013
Nol8nucleolar protein 80.013
Rpl37aribosomal protein L37a0.013
D19Bwg1357eDNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed0.013
Tcerg1transcription elongation regulator 1 (CA150)0.013
Mycmyelocytomatosis oncogene0.013
Wdr55WD repeat domain 550.013
Polr2bpolymerase (RNA) II (DNA directed) polypeptide B0.013
Rrs1RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)0.013
Rpl3ribosomal protein L30.013
Srsf7serine/arginine-rich splicing factor 70.012
Nolc1nucleolar and coiled-body phosphoprotein 10.012
Ctdp1CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 10.012
Msh6mutS homolog 6 (E. coli)0.012
Kti12KTI12 homolog, chromatin associated (S. cerevisiae)0.012
Ccar1cell division cycle and apoptosis regulator 10.012
Loading network...
Rattus norvegicus
NameDescriptionProbabilityFunc Analog Organism