The network for 'rrna metabolic process' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

rrna metabolic process

The chemical reactions and pathways involving rRNA, ribosomal RNA, a structural constituent of ribosomes.

NameDescriptionProbabilityFunc Analog Organism
RRP6Rrp6p0.998
NOP12Nop12p0.998
NOP1Nop1p0.998
NOP58Nop58p0.996
BFR2Bfr2p0.996
UTP22Utp22p0.994
GAR1Gar1p0.994
RPS18ARps18ap0.992
LRP1Lrp1p0.990
KRE33Kre33p0.986
POP5Pop5p0.984
RRP40Rrp40p0.984
RRP46Rrp46p0.984
RRP45Rrp45p0.984
FAF1Faf1p0.980
UTP10Utp10p0.976
DIS3Dis3p0.974
MPP10Mpp10p0.974
POP4Pop4p0.973
SLX9Slx9p0.973
POP6Pop6p0.973
RIO1Rio1p0.971
DRS1Drs1p0.970
NAN1Nan1p0.969
MAK21Mak21p0.968
NOP6Nop6p0.967
MPP6Mpp6p0.966
SOF1Sof1p0.965
UTP6Utp6p0.956
RRP14Rrp14p0.955
RIX7Rix7p0.954
RRP43Rrp43p0.954
RPF2Rpf2p0.954
NOP56Nop56p0.953
RPS4ARps4ap0.951
PWP2Pwp2p0.949
ENP1Enp1p0.949
NIP7Nip7p0.948
EBP2Ebp2p0.943
DBP10Dbp10p0.942
RIO2Rio2p0.940
RPS13Rps13p0.940
NOB1Nob1p0.940
ESF1Esf1p0.938
DOM34Dom34p0.936
POP1Pop1p0.936
UTP13Utp13p0.935
MTR4Mtr4p0.935
RIX1Rix1p0.932
KRR1Krr1p0.931
RPS24BRps24bp0.930
PXR1Pxr1p0.928
TSR1Tsr1p0.925
RPP1Rpp1p0.921
RRP4Rrp4p0.918
PRP43Prp43p0.917
UTP25Utp25p0.916
ESF2Esf2p0.914
DIP2Dip2p0.914
NRD1Nrd1p0.913
NOP14Nop14p0.907
RPS7BRps7bp0.904
RLP7Rlp7p0.902
MRD1Mrd1p0.900
IMP3Imp3p0.900
FYV7Fyv7p0.897
MTR3Mtr3p0.894
SPB1Spb1p0.892
RPL28Rpl28p0.890
SKI6Ski6p0.889
ECM16Ecm16p0.879
ERB1Erb1p0.876
POP3Pop3p0.871
NOC2Noc2p0.870
CSL4Csl4p0.862
ENP2Enp2p0.858
RPS1BRps1bp0.855
RRP5Rrp5p0.854
UTP7Utp7p0.852
NOP8Nop8p0.850
SAS10Sas10p0.845
UTP21Utp21p0.843
RRP36Rrp36p0.836
RRP15Rrp15p0.832
RPS7ARps7ap0.830
POP8Pop8p0.812
RPA43Rpa43p0.808
ASC1Asc1p0.808
RPL13ARpl13ap0.806
RPS18BRps18bp0.805
RPS5Rps5p0.796
LCP5Lcp5p0.795
SPB4Spb4p0.792
UTP4Utp4p0.787
HIT1Hit1p0.786
RPS19BRps19bp0.782
NSR1Nsr1p0.780
RPL15ARpl15ap0.753
NOP2Nop2p0.748
HAS1Has1p0.746
Loading network...
Caenorhabditis elegans
NameDescriptionProbabilityFunc Analog Organism
Y53C12B.1Protein Y53C12B.10.998
rbd-1Protein RBD-10.951
tag-184Protein TAG-1840.949
rha-2Protein RHA-20.914
C05C8.2Protein C05C8.20.897
C44E4.4Protein C44E4.40.881
rpl-32Protein RPL-320.849
CELE_C24H12.4Protein C24H12.40.840
K04C2.2Protein K04C2.20.827
wdr-46Protein WDR-460.823
rps-3Protein RPS-30.816
puf-12Protein PUF-120.796
Y46E12BL.2Protein Y46E12BL.20.793
pro-2Protein PRO-20.783
rpl-6Protein RPL-60.776
CELE_F07E5.5Protein F07E5.50.776
rpl-14Protein RPL-140.770
toe-1Protein TOE-10.761
rps-17Protein RPS-170.753
rpl-16Protein RPL-160.722
W07E6.2Protein W07E6.20.713
K07C5.4Protein K07C5.40.711
C47E12.7Protein C47E12.70.704
ZK512.2Protein ZK512.20.689
T10B5.3Protein T10B5.30.684
rpl-19Protein RPL-190.674
rps-18Protein RPS-180.668
lpd-6Protein LPD-60.654
Y66H1A.4Protein Y66H1A.40.652
H06I04.3Protein H06I04.30.646
rrbs-1Protein RRBS-10.630
rps-8Protein RPS-80.622
ZK546.14Protein ZK546.140.622
C18A3.3Protein C18A3.30.615
rps-7Protein RPS-70.614
rps-23Protein RPS-230.611
rpl-3Protein RPL-30.607
F49D11.10Protein F49D11.100.603
rpl-2Protein RPL-20.603
ngp-1Protein NGP-10.593
CELE_T06E6.1Protein T06E6.10.592
F55F8.2Protein F55F8.20.581
K07H8.10Protein K07H8.100.579
rpl-18Protein RPL-180.569
ZK686.2Protein ZK686.20.563
crn-3Protein CRN-30.556
nol-5Protein NOL-50.537
Y48E1A.1Protein Y48E1A.10.527
CELE_W03F9.10Protein W03F9.100.519
C37H5.5Protein C37H5.50.518
dao-5Protein DAO-50.514
rpl-30Protein RPL-300.511
rps-14Protein RPS-140.501
CELE_Y52B11A.10Protein Y52B11A.100.497
C53H9.2Protein C53H9.20.481
dis-3Protein DIS-30.479
ubq-2Protein UBQ-20.467
R02F2.7Protein R02F2.70.464
F11A10.7Protein F11A10.70.456
F09F7.3Protein F09F7.30.448
rpl-7Protein RPL-70.445
M28.5Protein M28.50.442
F44G4.1Protein F44G4.10.424
CELE_Y57A10A.27Protein Y57A10A.270.419
let-716Protein LET-7160.418
rpl-35Protein RPL-350.414
egl-45Protein EGL-450.389
F55F8.3Protein F55F8.30.383
rpl-31Protein RPL-310.365
W03G9.3Protein W03G9.30.358
rpl-38Protein RPL-380.357
eif-3.BProtein EIF-3.B0.355
rpl-22Protein RPL-220.348
smc-3Protein SMC-30.344
lpd-2Protein LPD-20.324
CELE_T26G10.1Protein T26G10.10.323
pro-1Protein PRO-10.320
Y48G1A.4Protein Y48G1A.40.318
nmt-1Protein NMT-10.312
F18C12.3Protein F18C12.30.311
F58B3.4Protein F58B3.40.309
ZK484.3Protein ZK484.30.304
rla-0Protein RLA-00.299
rps-21Protein RPS-210.293
rpl-36Protein RPL-360.292
rpl-41Protein RPL-410.290
rps-30Protein RPS-300.288
CELE_F53F4.11Protein F53F4.110.284
ZK792.5Protein ZK792.50.284
rpl-15Protein RPL-150.282
T28C6.7Protein T28C6.70.281
F27C1.6Protein F27C1.60.281
rpl-24.2Protein RPL-24.20.277
rpb-2Protein RPB-20.265
rps-12Protein RPS-120.261
acin-1Protein ACIN-10.261
fust-1Protein FUST-10.260
nap-1Protein NAP-10.248
rpl-5Protein RPL-50.248
T12E12.3Protein T12E12.30.244
Loading network...
Danio rerio
NameDescriptionProbabilityFunc Analog Organism
im:7148292im:71482920.665
utp15utp15, U3 small nucleolar ribonucleoprotein, homolog0.484
wdr75WD repeat domain 750.483
tbl3transducin (beta)-like 30.429
nola1nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs)0.345
ddx18DEAD (Asp-Glu-Ala-Asp) box polypeptide 180.284
pespescadillo0.245
nop58NOP58 ribonucleoprotein homolog (yeast)0.192
rpl14ribosomal protein L140.190
gnl3guanine nucleotide binding protein-like 3 (nucleolar)0.159
wdr3WD repeat domain 30.153
si:dkey-91i17.1si:dkey-91i17.10.150
diexfdigestive organ expansion factor homolog0.145
fblfibrillarin0.143
polr1apolymerase (RNA) I polypeptide A0.138
wdr36WD repeat domain 360.138
etf1eukaryotic translation termination factor 10.133
med12mediator of RNA polymerase II transcription, subunit 12 homolog0.115
rps15ribosomal protein S150.113
surf6surfeit 60.100
rrp1ribosomal RNA processing 1 homolog (S. cerevisiae)0.091
npm1nucleophosmin 10.091
rpl35ribosomal protein L350.086
rps15aribosomal protein S15a0.085
rpl13ribosomal protein L130.084
rpl7l1ribosomal protein L7-like 10.077
ddx27DEAD (Asp-Glu-Ala-Asp) box polypeptide 270.076
gnl3lguanine nucleotide binding protein-like 3 (nucleolar)-like0.076
rpl7ribosomal protein L70.071
wdr46WD repeat domain 460.068
rps4xribosomal protein S4, X-linked0.067
rps8aribosomal protein S8a0.066
rpsaribosomal protein SA0.062
prp19PRP19/PSO4 homolog (S. cerevisiae)0.060
mki67ipmki67 (FHA domain) interacting nucleolar phosphoprotein (human)0.058
rpl13aribosomal protein L13a0.054
pdcd11programmed cell death 110.053
rpl6ribosomal protein L60.052
utp11lUTP11-like, U3 small nucleolar ribonucleoprotein (yeast)0.052
zgc:56683zgc:566830.050
zgc:109888zgc:1098880.050
mcmbpminichromosome maintenance complex binding protein0.048
nol6nucleolar protein family 6 (RNA-associated)0.047
rpl5bribosomal protein L5b0.046
rpl36aribosomal protein L36A0.046
rpl11ribosomal protein L110.043
utp6UTP6, small subunit (SSU) processome component, homolog (yeast)0.043
eif5a2eukaryotic translation initiation factor 5A20.042
zgc:109901zgc:1099010.042
rpl5aribosomal protein L5a0.037
tsr1TSR1, 20S rRNA accumulation, homolog (yeast)0.036
rps29ribosomal protein S290.036
rps18ribosomal protein S180.034
rpl3ribosomal protein L30.033
rsl24d1ribosomal L24 domain containing 10.033
pprc1peroxisome proliferator-activated receptor gamma, coactivator-related 10.032
dhx37DEAH (Asp-Glu-Ala-His) box polypeptide 370.032
bop1block of proliferation 10.032
noc3lnucleolar complex associated 3 homolog (S. cerevisiae)0.031
g3bp1GTPase activating protein (SH3 domain) binding protein 10.028
eif4bbeukaryotic translation initiation factor 4Bb0.026
zgc:65996zgc:659960.026
zgc:123327zgc:1233270.026
zgc:76988zgc:769880.025
rps25ribosomal protein S250.025
rpl19ribosomal protein L190.025
rpl10aribosomal protein L10a0.025
rps10ribosomal protein S100.025
adssladenylosuccinate synthase, like0.024
nolc1nucleolar and coiled-body phosphoprotein 10.024
polr1cpolymerase (RNA) I polypeptide C0.024
rrs1RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)0.024
nsun5NOP2/Sun domain family, member 50.024
extl3exostoses (multiple)-like 30.023
imp4IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)0.021
zgc:123178zgc:1231780.021
rps7ribosomal protein S70.021
rps27aribosomal protein S27a0.021
mphosph6M-phase phosphoprotein 60.021
rps3ribosomal protein S30.020
rpl7aribosomal protein L7a0.020
rpl38ribosomal protein L380.020
ctpsCTP synthase0.020
zgc:92872zgc:928720.020
rps5ribosomal protein S50.019
rpl18aribosomal protein L18a0.019
pno1partner of NOB1 homolog (S. cerevisiae)0.019
nsa2NSA2 ribosome biogenesis homolog (S. cerevisiae)0.019
rps21ribosomal protein S210.019
eef2a.1eukaryotic translation elongation factor 2a, tandem duplicate 10.018
nat10N-acetyltransferase 100.018
byslbystin-like0.018
wu:fk33d07wu:fk33d070.018
nol10nucleolar protein 100.017
rps12ribosomal protein S120.017
noc4lnucleolar complex associated 4 homolog (S. cerevisiae)0.017
rps19ribosomal protein S190.017
polr1bpolymerase (RNA) I polypeptide B0.017
fam203afamily with sequence similarity 203, member A0.017
abcf2ATP-binding cassette, sub-family F (GCN20), member 20.017
Loading network...
Drosophila melanogaster
NameDescriptionProbabilityFunc Analog Organism
Loading network...
Homo sapiens
NameDescriptionProbabilityFunc Analog Organism
EXOSC3exosome component 31.000
FBLfibrillarin0.999
EXOSC2exosome component 20.999
LYARLy1 antibody reactive homolog (mouse)0.999
NPM1nucleophosmin (nucleolar phosphoprotein B23, numatrin)0.997
RPS3ribosomal protein S30.993
NOP56NOP56 ribonucleoprotein homolog (yeast)0.992
RPS6ribosomal protein S60.990
GNL3guanine nucleotide binding protein-like 3 (nucleolar)0.988
DKC1dyskeratosis congenita 1, dyskerin0.984
EXOSC7exosome component 70.982
EXOSC10exosome component 100.980
RPS7ribosomal protein S70.976
EXOSC5exosome component 50.959
EBNA1BP2EBNA1 binding protein 20.953
RPS4Xribosomal protein S4, X-linked0.953
EXOSC4exosome component 40.943
RPS5ribosomal protein S50.940
DDX21DEAD (Asp-Glu-Ala-Asp) box polypeptide 210.929
RPS16ribosomal protein S160.922
MYBBP1AMYB binding protein (P160) 1a0.912
NOLC1nucleolar and coiled-body phosphoprotein 10.908
BOP1block of proliferation 10.896
DIS3LDIS3 mitotic control homolog (S. cerevisiae)-like0.885
UTP14AUTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)0.872
WDR3WD repeat domain 30.860
GNL2guanine nucleotide binding protein-like 2 (nucleolar)0.857
SMURF2SMAD specific E3 ubiquitin protein ligase 20.838
EXOSC8exosome component 80.825
RPS15ribosomal protein S150.802
SYVN1synovial apoptosis inhibitor 1, synoviolin0.799
RPS3Aribosomal protein S3A0.789
RPS13ribosomal protein S130.783
RPSAribosomal protein SA0.782
MAGOHmago-nashi homolog, proliferation-associated (Drosophila)0.778
NOC3Lnucleolar complex associated 3 homolog (S. cerevisiae)0.766
RPS19ribosomal protein S190.721
RPL11ribosomal protein L110.713
RPS2ribosomal protein S20.704
WDR43WD repeat domain 430.672
EIF2S1eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa0.657
RPL7ribosomal protein L70.655
RPS15Aribosomal protein S15a0.651
HEATR1HEAT repeat containing 10.639
VCPvalosin containing protein0.637
RPL6ribosomal protein L60.628
RPL18ribosomal protein L180.621
KIAA0020KIAA00200.604
CEBPZCCAAT/enhancer binding protein (C/EBP), zeta0.602
RPS25ribosomal protein S250.600
RPS14ribosomal protein S140.588
NOL11nucleolar protein 110.554
CIRH1Acirrhosis, autosomal recessive 1A (cirhin)0.550
NOL8nucleolar protein 80.540
C10orf2chromosome 10 open reading frame 20.525
NAT10N-acetyltransferase 10 (GCN5-related)0.519
RPLP0ribosomal protein, large, P00.506
RPL36ribosomal protein L360.500
FTSJ3FtsJ homolog 3 (E. coli)0.477
RPS8ribosomal protein S80.470
EIF3Beukaryotic translation initiation factor 3, subunit B0.467
RPS24ribosomal protein S240.466
RPL4ribosomal protein L40.451
EEF1B2eukaryotic translation elongation factor 1 beta 20.443
EIF5Beukaryotic translation initiation factor 5B0.429
TSR1TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)0.392
LAS1LLAS1-like (S. cerevisiae)0.381
NCLnucleolin0.369
NOP58NOP58 ribonucleoprotein homolog (yeast)0.362
ESF1ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)0.348
LSM7LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)0.339
RPS12ribosomal protein S120.338
NOP14NOP14 nucleolar protein homolog (yeast)0.335
DDX18DEAD (Asp-Glu-Ala-Asp) box polypeptide 180.327
DIS3DIS3 mitotic control homolog (S. cerevisiae)0.327
RPL5ribosomal protein L50.311
RPL21ribosomal protein L210.311
MKI67IPMKI67 (FHA domain) interacting nucleolar phosphoprotein0.308
RPF2ribosome production factor 2 homolog (S. cerevisiae)0.305
GTPBP4GTP binding protein 40.305
MAK16MAK16 homolog (S. cerevisiae)0.301
PUS7pseudouridylate synthase 7 homolog (S. cerevisiae)0.276
BRIX1BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)0.264
PES1pescadillo homolog 1, containing BRCT domain (zebrafish)0.261
EXOSC9exosome component 90.259
WDR74WD repeat domain 740.259
DIMT1LDIM1 dimethyladenosine transferase 1-like (S. cerevisiae)0.256
NSUN2NOP2/Sun domain family, member 20.252
MRTO4mRNA turnover 4 homolog (S. cerevisiae)0.242
RRP15ribosomal RNA processing 15 homolog (S. cerevisiae)0.242
LTV1LTV1 homolog (S. cerevisiae)0.236
WDR75WD repeat domain 750.233
RPS11ribosomal protein S110.230
RRP9ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)0.227
PWP1PWP1 homolog (S. cerevisiae)0.224
RBM28RNA binding motif protein 280.214
EXOSC1exosome component 10.212
SNRPD2small nuclear ribonucleoprotein D2 polypeptide 16.5kDa0.209
RPS10ribosomal protein S100.207
ABCE1ATP-binding cassette, sub-family E (OABP), member 10.204
Loading network...
Mus musculus
NameDescriptionProbabilityFunc Analog Organism
Ddx21DEAD (Asp-Glu-Ala-Asp) box polypeptide 210.327
Tsr1TSR1, 20S rRNA accumulation, homolog (yeast)0.289
D19Bwg1357eDNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed0.118
Nsun2NOL1/NOP2/Sun domain family member 20.090
Mybbp1aMYB binding protein (P160) 1a0.086
Wdr74WD repeat domain 740.084
Npm1nucleophosmin 10.083
Ftsj3FtsJ homolog 3 (E. coli)0.077
Eedembryonic ectoderm development0.063
Wdr43WD repeat domain 430.063
Fblfibrillarin0.052
Rrp15ribosomal RNA processing 15 homolog (S. cerevisiae)0.050
Rps7ribosomal protein S70.047
Tarsthreonyl-tRNA synthetase0.045
Nop2NOP2 nucleolar protein homolog (yeast)0.043
Gnl3guanine nucleotide binding protein-like 3 (nucleolar)0.043
Utp20UTP20, small subunit (SSU) processome component, homolog (yeast)0.041
Wdr46WD repeat domain 460.039
Ltv1LTV1 homolog (S. cerevisiae)0.037
Nop58NOP58 ribonucleoprotein homolog (yeast)0.035
Rsl1d1ribosomal L1 domain containing 10.035
Ddx1DEAD (Asp-Glu-Ala-Asp) box polypeptide 10.034
Grwd1glutamate-rich WD repeat containing 10.030
Wdr3WD repeat domain 30.030
Dnttip2deoxynucleotidyltransferase, terminal, interacting protein 20.029
Mki67ipMki67 (FHA domain) interacting nucleolar phosphoprotein0.029
Elac2elaC homolog 2 (E. coli)0.028
Spata5spermatogenesis associated 50.028
Lsg1large subunit GTPase 1 homolog (S. cerevisiae)0.027
Nolc1nucleolar and coiled-body phosphoprotein 10.026
Ppanpeter pan homolog (Drosophila)0.026
Rrs1RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)0.025
Mak16MAK16 homolog (S. cerevisiae)0.025
Gtf2f1general transcription factor IIF, polypeptide 10.023
Emg1EMG1 nucleolar protein homolog (S. cerevisiae)0.022
Cirh1acirrhosis, autosomal recessive 1A (human)0.020
Dkc1dyskeratosis congenita 1, dyskerin homolog (human)0.020
Nop56NOP56 ribonucleoprotein homolog (yeast)0.020
Nop14NOP14 nucleolar protein homolog (yeast)0.020
Noc3lnucleolar complex associated 3 homolog (S. cerevisiae)0.019
Rarsarginyl-tRNA synthetase0.019
Rrp1bribosomal RNA processing 1 homolog B (S. cerevisiae)0.019
Gnl2guanine nucleotide binding protein-like 2 (nucleolar)0.016
Pwp2PWP2 periodic tryptophan protein homolog (yeast)0.016
CebpzCCAAT/enhancer binding protein zeta0.015
U2af1U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 10.015
Gtpbp4GTP binding protein 40.015
2610027L16RikRIKEN cDNA 2610027L16 gene0.015
Nmd3NMD3 homolog (S. cerevisiae)0.014
Rpl36aribosomal protein L36A0.014
Cyldcylindromatosis (turban tumor syndrome)0.014
Ddx10DEAD (Asp-Glu-Ala-Asp) box polypeptide 100.013
Pus1pseudouridine synthase 10.013
Ddx18DEAD (Asp-Glu-Ala-Asp) box polypeptide 180.013
Wdr75WD repeat domain 750.013
Utp6UTP6, small subunit (SSU) processome component, homolog (yeast)0.013
Eef1e1eukaryotic translation elongation factor 1 epsilon 10.012
Ccdc86coiled-coil domain containing 860.012
Rrp9RRP9, small subunit (SSU) processome component, homolog (yeast)0.012
Smyd5SET and MYND domain containing 50.012
Mettl1methyltransferase like 10.012
Nhp2NHP2 ribonucleoprotein homolog (yeast)0.012
Brix1BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)0.012
Exosc1exosome component 10.011
Noc4lnucleolar complex associated 4 homolog (S. cerevisiae)0.011
Znhit6zinc finger, HIT type 60.011
Gpatch4G patch domain containing 40.011
Tax1bp1Tax1 (human T-cell leukemia virus type I) binding protein 10.011
Nufip1nuclear fragile X mental retardation protein interacting protein 10.011
Sdad1SDA1 domain containing 10.011
Heatr1HEAT repeat containing 10.011
Orc2origin recognition complex, subunit 20.010
Adsladenylosuccinate lyase0.010
Plrg1pleiotropic regulator 1, PRL1 homolog (Arabidopsis)0.010
Loading network...
Rattus norvegicus
NameDescriptionProbabilityFunc Analog Organism
Rps27aribosomal protein S27a0.011
Rpl19ribosomal protein L190.010
Rpl31ribosomal protein L310.010