The network for 'protein dna complex assembly' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

protein dna complex assembly

The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex.

NameDescriptionProbabilityFunc Analog Organism
HHT1Hht1p1.000
ORC1Orc1p0.998
SPT15Spt15p0.997
RLF2Rlf2p0.989
TAF4Taf4p0.987
POB3Pob3p0.986
HHF1Hhf1p0.985
HTB1Htb1p0.969
ORC6Orc6p0.965
HIR1Hir1p0.951
ASF1Asf1p0.950
RTT106Rtt106p0.942
TAF6Taf6p0.939
MCM6Mcm6p0.938
ORC5Orc5p0.936
HAT1Hat1p0.935
HTB2Htb2p0.930
TAF10Taf10p0.881
HHT2Hht2p0.878
DBF4Dbf4p0.872
HAT2Hat2p0.858
CAC2Cac2p0.849
MCM3Mcm3p0.848
MCM2Mcm2p0.843
HIF1Hif1p0.842
SHU1Shu1p0.822
ORC3Orc3p0.806
ORC2Orc2p0.798
MCM5Mcm5p0.761
PSY3Psy3p0.760
HPC2Hpc2p0.740
MCM4Mcm4p0.739
BUR6Bur6p0.720
TAF3Taf3p0.707
SHU2Shu2p0.704
MOT1Mot1p0.696
RAD54Rad54p0.688
SRB6Srb6p0.686
RSC8Rsc8p0.685
ORC4Orc4p0.662
SPT8Spt8p0.635
HTA1Hta1p0.633
CKA1Cka1p0.633
TAF12Taf12p0.623
TAF7Taf7p0.597
CSM2Csm2p0.586
HIR3Hir3p0.563
HTA2Hta2p0.523
TAF5Taf5p0.521
HHF2Hhf2p0.519
IPL1Ipl1p0.515
SPT16Spt16p0.510
MED2Med2p0.506
MCM7Mcm7p0.495
CLB5Clb5p0.452
HHO1Hho1p0.415
FUN30Fun30p0.408
HIR2Hir2p0.393
RRN9Rrn9p0.392
TOA2Toa2p0.382
RFA1Rfa1p0.380
BRF1Brf1p0.375
NOC3Noc3p0.365
BDF1Bdf1p0.359
TAF9Taf9p0.349
SAE3Sae3p0.339
SPT2Spt2p0.335
TAH11Tah11p0.334
RPT5Rpt5p0.319
BDF2Bdf2p0.314
SRB4Srb4p0.312
IPI3Ipi3p0.306
RAD55Rad55p0.294
RPN13Rpn13p0.285
MCM10Mcm10p0.280
MED1Med1p0.272
RPT6Rpt6p0.271
RPT1Rpt1p0.263
MTC1Mtc1p0.257
TAF11Taf11p0.255
CSE2Cse2p0.249
CDC45Cdc45p0.235
PSH1Psh1p0.231
RPN10Rpn10p0.228
MIF2Mif2p0.226
SRB2Srb2p0.222
SAS4Sas4p0.221
CBF1Cbf1p0.221
MED7Med7p0.218
RPT3Rpt3p0.206
TAF8Taf8p0.202
RAD23Rad23p0.198
SAS2Sas2p0.184
RTT109Rtt109p0.179
CSE4Cse4p0.176
SNF5Snf5p0.175
RPN6Rpn6p0.171
MED8Med8p0.170
GAL11Gal11p0.169
KAP114Kap114p0.167
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Caenorhabditis elegans
NameDescriptionProbabilityFunc Analog Organism
cdl-1Protein CDL-10.128
rpn-7Protein RPN-70.090
bub-1Protein BUB-10.078
rfc-3Protein RFC-30.077
let-858Protein LET-8580.071
nst-1Protein NST-10.062
crn-3Protein CRN-30.055
air-2Protein AIR-20.049
tag-135Protein TAG-1350.047
hcp-3Protein HCP-30.045
Y42H9B.3Protein Y42H9B.30.044
ndc-80Protein NDC-800.042
dnj-11Protein DNJ-110.041
lin-53Protein LIN-530.038
plp-1Protein PLP-10.037
cosa-1Protein COSA-10.034
cec-5Protein CEC-50.031
nud-1Protein NUD-10.028
rpb-2Protein RPB-20.027
cec-4Protein CEC-40.027
CELE_Y23H5A.3Protein Y23H5A.30.026
R04F11.3Protein R04F11.30.025
zyg-1Protein ZYG-10.025
exo-3Protein EXO-30.023
T05B9.1Protein T05B9.10.022
ran-1Protein RAN-10.022
W06B4.1Protein W06B4.10.022
pqn-59Protein PQN-590.021
F25B5.2Protein F25B5.20.021
fcp-1Protein FCP-10.021
C56G2.7Protein C56G2.70.020
klp-16Protein KLP-160.020
npl-4.2Protein NPL-4.20.020
rpt-2Protein RPT-20.020
C52B9.8Protein C52B9.80.019
rnr-1Protein RNR-10.019
spt-5Protein SPT-50.019
capg-2Protein CAPG-20.019
sas-5Protein SAS-50.019
CELE_F25B4.5Protein F25B4.50.018
lin-35Protein LIN-350.018
B0511.6Protein B0511.60.018
sqv-4Protein SQV-40.018
rfp-1Protein RFP-10.018
M03C11.8Protein M03C11.80.016
mdf-2Protein MDF-20.016
dnj-19Protein DNJ-190.015
mes-6Protein MES-60.015
mcm-7Protein MCM-70.015
zen-4Protein ZEN-40.014
B0261.7Protein B0261.70.013
CELE_Y111B2A.3Protein Y111B2A.30.013
scc-1Protein SCC-10.012
him-10Protein HIM-100.012
mep-1Protein MEP-10.012
C15C6.4Protein C15C6.40.012
fkb-6Protein FKB-60.012
F55A3.3Protein F55A3.30.011
F25D7.4Protein F25D7.40.011
F54E7.8Protein F54E7.80.011
F20A1.9Protein F20A1.90.011
tba-1Protein TBA-10.011
CELE_C24H12.5Protein C24H12.50.011
CELE_F17C11.10Protein F17C11.100.010
cdt-1Protein CDT-10.010
C16A3.4Protein C16A3.40.010
C16A11.4Protein C16A11.40.010
glh-4Protein GLH-40.010
hil-4Protein HIL-40.010
sdc-2Protein SDC-20.010
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Danio rerio
NameDescriptionProbabilityFunc Analog Organism
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Drosophila melanogaster
NameDescriptionProbabilityFunc Analog Organism
Pros26.4Proteasome 26S subunit subunit 4 ATPase0.894
Mcm7Minichromosome maintenance 70.784
CG18764CG18764 gene product from transcript CG18764-RA0.764
Rpt3CG16916 gene product from transcript CG16916-RA0.735
Fs(2)KetFemale sterile (2) Ketel0.638
Rpn11CG18174 gene product from transcript CG18174-RA0.602
His2AvHistone H2A variant0.601
Ndc80CG9938 gene product from transcript CG9938-RA0.552
CDC45LCG3658 gene product from transcript CG3658-RA0.516
CG5384CG5384 gene product from transcript CG5384-RA0.367
RnrLRibonucleoside diphosphate reductase large subunit0.337
bab2CG9102 gene product from transcript CG9102-RA0.326
MRG15CG6363 gene product from transcript CG6363-RA0.323
CG10630CG10630 gene product from transcript CG10630-RA0.321
His4:CG33905CG33905 gene product from transcript CG33905-RA0.313
His4:CG33877CG33877 gene product from transcript CG33877-RA0.310
SuURSuppressor of Under-Replication0.305
His4:CG33903CG33903 gene product from transcript CG33903-RA0.304
CG3430CG3430 gene product from transcript CG3430-RA0.300
His4:CG33901CG33901 gene product from transcript CG33901-RA0.294
Mcm5Minichromosome maintenance 50.289
luteCG5319 gene product from transcript CG5319-RA0.265
smt3CG4494 gene product from transcript CG4494-RA0.230
Spc25CG7242 gene product from transcript CG7242-RA0.229
Nuf2CG8902 gene product from transcript CG8902-RA0.206
Prosbeta7Proteasome beta7 subunit0.204
CG12942CG12942 gene product from transcript CG12942-RA0.198
asunasunder0.196
BRWD3CG31132 gene product from transcript CG31132-RA0.196
His4:CG33881CG33881 gene product from transcript CG33881-RA0.193
His4:CG33887CG33887 gene product from transcript CG33887-RA0.193
SlbpStem-loop binding protein0.191
His4:CG33907CG33907 gene product from transcript CG33907-RA0.189
Orc2Origin recognition complex subunit 20.188
mus101mutagen-sensitive 1010.184
RfC38Replication factor C 38kD subunit0.182
His4:CG33891CG33891 gene product from transcript CG33891-RA0.180
His4:CG33895CG33895 gene product from transcript CG33895-RA0.180
His4:CG33889CG33889 gene product from transcript CG33889-RA0.178
wdewindei0.178
His4:CG33909CG33909 gene product from transcript CG33909-RA0.176
DllDistal-less0.171
His4:CG33883CG33883 gene product from transcript CG33883-RA0.166
His4:CG33885CG33885 gene product from transcript CG33885-RA0.166
His4:CG33879CG33879 gene product from transcript CG33879-RA0.166
Mcm10Sensitized chromosome inheritance modifier 190.164
CG2183CG2183 gene product from transcript CG2183-RA0.160
dnkdeoxyribonucleoside kinase0.159
His4:CG33897CG33897 gene product from transcript CG33897-RA0.158
His4:CG33893CG33893 gene product from transcript CG33893-RA0.158
His4:CG33899CG33899 gene product from transcript CG33899-RA0.154
marsCG17064 gene product from transcript CG17064-RB0.154
SF1Splicing factor 10.151
GstD6Glutathione S transferase D60.148
CG12883CG12883 gene product from transcript CG12883-RA0.147
cdc2cCG10498 gene product from transcript CG10498-RC0.141
DrefDNA replication-related element factor0.140
Gbeta13FG protein beta-subunit 13F0.137
RfC3Replication factor C subunit 30.133
CG9894CG9894 gene product from transcript CG9894-RB0.133
CG32458CG32458 gene product from transcript CG32458-RA0.129
Sas-4CG10061 gene product from transcript CG10061-RA0.128
CG42308CG42308 gene product from transcript CG42308-RA0.127
CG15141CG15141 gene product from transcript CG15141-RA0.125
cal1chromosome alignment defect 10.123
CG13472CG13472 gene product from transcript CG13472-RA0.119
DNApol-deltaDNA-polymerase-delta0.116
Caf1Chromatin assembly factor 1 subunit0.115
TfIIA-LTranscription factor IIA L0.113
CG1440CG1440 gene product from transcript CG1440-RA0.113
cyp33cyclophilin-330.112
CG32418CG32418 gene product from transcript CG32418-RA0.112
Vps16BVacuolar protein sorting 16B0.111
CG9135CG9135 gene product from transcript CG9135-RB0.111
Snr1Snf5-related 10.110
Rpn2CG11888 gene product from transcript CG11888-RA0.109
Rpb4CG33520 gene product from transcript CG33520-RF0.109
stwlstonewall0.108
CG3226CG3226 gene product from transcript CG3226-RA0.107
Sgf29CG30390 gene product from transcript CG30390-RA0.107
chmchameau0.106
Prp19CG5519 gene product from transcript CG5519-RA0.106
CG34244CG34244 gene product from transcript CG34244-RA0.106
AntpAntennapedia0.105
pavpavarotti0.105
Mes4CG11301 gene product from transcript CG11301-RB0.104
rodrough deal0.103
CG11188CG11188 gene product from transcript CG11188-RA0.100
CG6066CG6066 gene product from transcript CG6066-RA0.100
CG1965CG1965 gene product from transcript CG1965-RA0.096
Cenp-CCG31258 gene product from transcript CG31258-RA0.094
tostosca0.093
CG8108CG8108 gene product from transcript CG8108-RA0.092
CG6758CG6758 gene product from transcript CG6758-RA0.092
CG14120CG14120 gene product from transcript CG14120-RA0.092
CG6654CG6654 gene product from transcript CG6654-RA0.092
CG13350CG13350 gene product from transcript CG13350-RA0.088
His4:CG33869CG33869 gene product from transcript CG33869-RA0.088
CG32392CG32392 gene product from transcript CG32392-RB0.086
Rab9DbRab GTPase 9Db0.086
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Homo sapiens
NameDescriptionProbabilityFunc Analog Organism
TBPTATA box binding protein1.000
CBX5chromobox homolog 51.000
CHAF1Achromatin assembly factor 1, subunit A (p150)0.998
HIST1H3Bhistone cluster 1, H3b0.998
SETSET nuclear oncogene0.997
TAF4TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa0.996
HIST1H3Dhistone cluster 1, H3d0.994
CDK2cyclin-dependent kinase 20.992
CBX3chromobox homolog 30.989
ASF1BASF1 anti-silencing function 1 homolog B (S. cerevisiae)0.989
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 50.988
MCM2minichromosome maintenance complex component 20.988
SUMO2SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)0.978
ORC3origin recognition complex, subunit 30.978
CBX1chromobox homolog 10.977
MCM4minichromosome maintenance complex component 40.973
MCM7minichromosome maintenance complex component 70.971
HIST1H4Ahistone cluster 1, H4a0.952
MCM6minichromosome maintenance complex component 60.949
HDAC2histone deacetylase 20.939
PAX3paired box 30.937
RBBP4retinoblastoma binding protein 40.936
ORC2origin recognition complex, subunit 20.931
TAF1ATATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa0.923
HIST1H2AMhistone cluster 1, H2am0.905
SSRP1structure specific recognition protein 10.903
TAF1CTATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa0.898
MCM3minichromosome maintenance complex component 30.887
NSL1NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)0.879
HIST1H2ABhistone cluster 1, H2ab0.877
HIST1H3Ahistone cluster 1, H3a0.867
HIST1H2AEhistone cluster 1, H2ae0.865
RAD51L1RAD51-like 1 (S. cerevisiae)0.861
HIST1H2AJhistone cluster 1, H2aj0.851
PSMD10proteasome (prosome, macropain) 26S subunit, non-ATPase, 100.850
HIST1H4Dhistone cluster 1, H4d0.848
CDC7cell division cycle 7 homolog (S. cerevisiae)0.841
HIST1H4Fhistone cluster 1, H4f0.838
CHAF1Bchromatin assembly factor 1, subunit B (p60)0.835
PSMD2proteasome (prosome, macropain) 26S subunit, non-ATPase, 20.830
TAF5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa0.823
SMAD4SMAD family member 40.822
TAF9TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa0.819
HIST1H2AIhistone cluster 1, H2ai0.808
ORC1origin recognition complex, subunit 10.804
TAF1TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa0.804
HIST2H2BEhistone cluster 2, H2be0.800
HIST1H1Chistone cluster 1, H1c0.793
CENPAcentromere protein A0.772
HIST1H4Bhistone cluster 1, H4b0.765
RAD51CRAD51 homolog C (S. cerevisiae)0.749
POLE3polymerase (DNA directed), epsilon 3 (p17 subunit)0.723
CDAN1congenital dyserythropoietic anemia, type I0.723
HIST1H2ALhistone cluster 1, H2al0.718
RBBP7retinoblastoma binding protein 70.713
HIST1H2BGhistone cluster 1, H2bg0.707
ORC6origin recognition complex, subunit 60.690
XRCC2X-ray repair complementing defective repair in Chinese hamster cells 20.668
MCM10minichromosome maintenance complex component 100.657
LBRlamin B receptor0.652
YWHAGtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide0.639
XRCC6X-ray repair complementing defective repair in Chinese hamster cells 60.636
TAF11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa0.636
HIST1H2BBhistone cluster 1, H2bb0.608
HIST1H4Ehistone cluster 1, H4e0.601
MMS22LMMS22-like, DNA repair protein0.561
NUCKS1nuclear casein kinase and cyclin-dependent kinase substrate 10.560
RAD51L3RAD51-like 3 (S. cerevisiae)0.557
RXRAretinoid X receptor, alpha0.553
HIST1H3Ghistone cluster 1, H3g0.550
YWHABtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide0.535
DUTdeoxyuridine triphosphatase0.529
TAF1BTATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa0.519
HDAC1histone deacetylase 10.517
HIST4H4histone cluster 4, H40.516
H3F3AH3 histone, family 3A0.511
WRNWerner syndrome, RecQ helicase-like0.487
H2AFZH2A histone family, member Z0.485
GTF2A2general transcription factor IIA, 2, 12kDa0.446
MCM5minichromosome maintenance complex component 50.438
HIST1H4Hhistone cluster 1, H4h0.435
SRSF3serine/arginine-rich splicing factor 30.420
CDK9cyclin-dependent kinase 90.416
CDC6cell division cycle 6 homolog (S. cerevisiae)0.415
NASPnuclear autoantigenic sperm protein (histone-binding)0.390
HIST1H2BMhistone cluster 1, H2bm0.390
DAXXdeath-domain associated protein0.378
UBE2Iubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)0.354
ASF1AASF1 anti-silencing function 1 homolog A (S. cerevisiae)0.348
PSMD4proteasome (prosome, macropain) 26S subunit, non-ATPase, 40.346
YWHAQtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide0.343
HIST1H2BJhistone cluster 1, H2bj0.342
TAF12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa0.341
POGZpogo transposable element with ZNF domain0.334
HIST1H3Chistone cluster 1, H3c0.325
RB1retinoblastoma 10.319
BAZ1Bbromodomain adjacent to zinc finger domain, 1B0.310
NBNnibrin0.307
TAF10TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa0.301
NAP1L1nucleosome assembly protein 1-like 10.289
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Mus musculus
NameDescriptionProbabilityFunc Analog Organism
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Rattus norvegicus
NameDescriptionProbabilityFunc Analog Organism