The network for 'mrna splice site selection' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

mrna splice site selection

Selection of a splice site by components of the assembling spliceosome.

NameDescriptionProbabilityFunc Analog Organism
SNU56Snu56p0.350
SMX3Smx3p0.232
SMX2Smx2p0.224
SNP1Snp1p0.196
SNU71Snu71p0.188
YHC1Yhc1p0.160
LUC7Luc7p0.157
MUD1Mud1p0.141
SMD2Smd2p0.130
PRP42Prp42p0.125
SMB1Smb1p0.113
SMD1Smd1p0.082
SMD3Smd3p0.079
PRP8Prp8p0.057
BRR2Brr2p0.054
NAM8Nam8p0.042
PRP40Prp40p0.036
MUD2Mud2p0.032
TIF4632Tif4632p0.026
DED1Ded1p0.025
SLU7Slu7p0.025
MSL5Msl5p0.025
MPT5Mpt5p0.022
STO1Sto1p0.020
LSM8Lsm8p0.016
MEX67Mex67p0.016
URN1Urn1p0.016
PRP19Prp19p0.015
PKH3Pkh3p0.015
SRD1Srd1p0.015
SNU114Snu114p0.014
CWC21Cwc21p0.014
STB3Stb3p0.014
ARG8Arg8p0.014
SYF2Syf2p0.014
HPR1Hpr1p0.014
CWC27Cwc27p0.013
LEU2Leu2p0.013
PRS2Prs2p0.012
YLR264C-Ahypothetical protein0.012
YJU2Yju2p0.012
MER1Mer1p0.012
YLR162Whypothetical protein0.012
YOL038C-Ahypothetical protein0.012
YBR016Whypothetical protein0.012
ARP10Arp10p0.012
CUP1-1Cup1-1p0.012
GLN1Gln1p0.012
HRB1Hrb1p0.011
YAR068Whypothetical protein0.011
ATP6Atp6p0.011
HOHop0.011
YIL151Chypothetical protein0.011
SNU66Snu66p0.011
SPL2Spl2p0.011
YPR157Whypothetical protein0.011
YBR013Chypothetical protein0.011
SWC7Swc7p0.011
HPF1Hpf1p0.010
CPD1Cpd1p0.010
IZH4Izh4p0.010
YLR042Chypothetical protein0.010
AUA1Aua1p0.010
ZPS1Zps1p0.010
BSC1Bsc1p0.010
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Caenorhabditis elegans
NameDescriptionProbabilityFunc Analog Organism
aly-3Protein ALY-30.641
rsp-3Protein RSP-30.193
rsp-1Protein RSP-10.170
rsp-6Protein RSP-60.159
snr-4Protein SNR-40.154
hrpf-2Protein HRPF-20.146
snrp-27Protein SNRP-270.111
set-2Protein SET-20.109
lmn-1Protein LMN-10.090
hrpf-1Protein HRPF-10.078
dcn-1Protein DCN-10.073
uaf-2Protein UAF-20.068
rsp-2Protein RSP-20.050
snr-3Protein SNR-30.044
T08A11.2Protein T08A11.20.043
F17A2.13Protein F17A2.130.040
adr-1Protein ADR-10.038
elb-1Protein ELB-10.038
pabp-2Protein PABP-20.033
dnj-13Protein DNJ-130.029
snr-1Protein SNR-10.029
rsp-8Protein RSP-80.028
snr-6Protein SNR-60.026
ubxn-2Protein UBXN-20.026
acin-1Protein ACIN-10.025
CELE_F23A7.4Protein F23A7.40.025
dnj-19Protein DNJ-190.024
CELE_Y59A8B.10Protein Y59A8B.100.023
ced-9Protein CED-90.020
CELE_T05H4.11Protein T05H4.110.020
gex-2Protein GEX-20.019
tba-1Protein TBA-10.018
tiar-1Protein TIAR-10.018
dpy-30Protein DPY-300.018
cls-2Protein CLS-20.018
Y66H1A.4Protein Y66H1A.40.018
rsr-2Protein RSR-20.017
hrp-1Protein HRP-10.017
attf-2Protein ATTF-20.016
CELE_W03F9.10Protein W03F9.100.016
C46F11.4Protein C46F11.40.016
lin-8Protein LIN-80.015
lsm-5Protein LSM-50.014
D2085.3Protein D2085.30.013
smo-1Protein SMO-10.013
ZK418.9Protein ZK418.90.013
rnp-6Protein RNP-60.013
yif-1Protein YIF-10.013
CELE_Y73F8A.25Protein Y73F8A.250.012
snr-5Protein SNR-50.012
M03F8.3Protein M03F8.30.012
rpb-2Protein RPB-20.012
F08B4.7Protein F08B4.70.012
fust-1Protein FUST-10.012
C44E4.4Protein C44E4.40.012
hat-1Protein HAT-10.011
emb-5Protein EMB-50.011
T09B4.5Protein T09B4.50.011
ulp-2Protein ULP-20.011
btb-4Protein BTB-40.011
kin-10Protein KIN-100.011
T08B2.5Protein T08B2.50.011
C29F9.12Protein C29F9.120.011
ubc-3Protein UBC-30.010
cec-5Protein CEC-50.010
R186.7Protein R186.70.010
ntl-2Protein NTL-20.010
mig-38Protein MIG-380.010
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Danio rerio
NameDescriptionProbabilityFunc Analog Organism
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Drosophila melanogaster
NameDescriptionProbabilityFunc Analog Organism
cazcabeza0.341
reptreptin0.201
Uch-L3Ubiquitin C-terminal hydrolase0.111
noinoisette0.102
dre4CG1828 gene product from transcript CG1828-RB0.080
fzyfizzy0.074
Taf1TBP-associated factor 10.066
Bx42CG8264 gene product from transcript CG8264-RA0.054
belbelle0.046
mei-P26CG12218 gene product from transcript CG12218-RA0.043
B52CG10851 gene product from transcript CG10851-RB0.040
stwlstonewall0.038
scnyscrawny0.033
Rca1Regulator of cyclin A10.031
U2af50U2 small nuclear riboprotein auxiliary factor 500.030
snRNP-U1-70Ksmall ribonucleoprotein particle U1 subunit 70K0.030
tra2transformer 20.030
Sas10CG4202 gene product from transcript CG4202-RA0.030
Rsf1Repressor splicing factor 10.028
Cul-2Cullin-20.021
CG2469CG2469 gene product from transcript CG2469-RB0.021
Nipped-ACG33554 gene product from transcript CG33554-RE0.020
shtdshattered0.020
Hrb98DEHeterogeneous nuclear ribonucleoprotein at 98DE0.020
Cdc27CG8610 gene product from transcript CG8610-RA0.019
prodproliferation disrupter0.019
CG13900CG13900 gene product from transcript CG13900-RA0.018
Hrb27CHeterogeneous nuclear ribonucleoprotein at 27C0.018
blbancal0.017
SceSex combs extra0.017
Cenp-CCG31258 gene product from transcript CG31258-RA0.017
D1D1 chromosomal protein0.015
Rm62CG10279 gene product from transcript CG10279-RD0.015
SmrSmrter0.015
CG6854CG6854 gene product from transcript CG6854-RC0.015
14-3-3epsilonCG31196 gene product from transcript CG31196-RA0.014
Top2Topoisomerase 20.014
Bj1Bj1 protein0.014
Tip60CG6121 gene product from transcript CG6121-RA0.014
atmsantimeros0.014
Taf2TBP-associated factor 20.014
LamLamin0.013
kukkugelkern0.013
hydhyperplastic discs0.013
feofascetto0.013
lin19lin-19-like0.012
CG5794CG5794 gene product from transcript CG5794-RB0.012
rinrasputin0.012
cgcombgap0.012
brmbrahma0.012
RanBPMRan-binding protein M0.011
CG16941CG16941 gene product from transcript CG16941-RA0.011
larkCG8597 gene product from transcript CG8597-RD0.011
IswiImitation SWI0.010
qkr58E-1quaking related 58E-10.010
maelmaelstrom0.010
SF1Splicing factor 10.010
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Homo sapiens
NameDescriptionProbabilityFunc Analog Organism
SRPK2SRSF protein kinase 20.997
RNPS1RNA binding protein S1, serine-rich domain0.969
SRPK1SRSF protein kinase 10.862
U2AF1U2 small nuclear RNA auxiliary factor 10.838
SRSF2serine/arginine-rich splicing factor 20.816
SF3A2splicing factor 3a, subunit 2, 66kDa0.803
MAGOHmago-nashi homolog, proliferation-associated (Drosophila)0.641
U2AF2U2 small nuclear RNA auxiliary factor 20.614
EIF4A3eukaryotic translation initiation factor 4A30.530
SF3B2splicing factor 3b, subunit 2, 145kDa0.528
SRSF4serine/arginine-rich splicing factor 40.457
YWHAGtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide0.410
PRPF19PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)0.354
KHDRBS1KH domain containing, RNA binding, signal transduction associated 10.217
TRA2Btransformer 2 beta homolog (Drosophila)0.212
HNRNPH1heterogeneous nuclear ribonucleoprotein H1 (H)0.152
HNRNPA1heterogeneous nuclear ribonucleoprotein A10.135
SRSF10serine/arginine-rich splicing factor 100.120
SRSF6serine/arginine-rich splicing factor 60.113
RBM8ARNA binding motif protein 8A0.110
CDC5LCDC5 cell division cycle 5-like (S. pombe)0.107
PRPF3PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae)0.080
HNRNPCheterogeneous nuclear ribonucleoprotein C (C1/C2)0.073
SREK1splicing regulatory glutamine/lysine-rich protein 10.064
MATR3matrin 30.052
PRPF8PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)0.050
SF3B4splicing factor 3b, subunit 4, 49kDa0.048
MBNL1muscleblind-like (Drosophila)0.042
DDX5DEAD (Asp-Glu-Ala-Asp) box polypeptide 50.041
SRSF7serine/arginine-rich splicing factor 70.040
RBM10RNA binding motif protein 100.037
SRSF3serine/arginine-rich splicing factor 30.030
SNRNP200small nuclear ribonucleoprotein 200kDa (U5)0.029
PRPF38APRP38 pre-mRNA processing factor 38 (yeast) domain containing A0.028
RBM39RNA binding motif protein 390.028
CHERPcalcium homeostasis endoplasmic reticulum protein0.027
FUBP1far upstream element (FUSE) binding protein 10.019
CELF1CUGBP, Elav-like family member 10.019
SF1splicing factor 10.015
HNRNPA0heterogeneous nuclear ribonucleoprotein A00.015
SRRM1serine/arginine repetitive matrix 10.014
RALYRNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))0.013
SF3B1splicing factor 3b, subunit 1, 155kDa0.012
PPIL3peptidylprolyl isomerase (cyclophilin)-like 30.012
HNRNPH3heterogeneous nuclear ribonucleoprotein H3 (2H9)0.011
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Mus musculus
NameDescriptionProbabilityFunc Analog Organism
Hnrnph1heterogeneous nuclear ribonucleoprotein H10.411
Srsf7serine/arginine-rich splicing factor 70.208
Raver2ribonucleoprotein, PTB-binding 20.135
Sfpqsplicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)0.071
Srsf3serine/arginine-rich splicing factor 30.059
Srsf1serine/arginine-rich splicing factor 10.054
Srsf10serine/arginine-rich splicing factor 100.048
TardbpTAR DNA binding protein0.047
Hnrnpa3heterogeneous nuclear ribonucleoprotein A30.046
Hnrnpmheterogeneous nuclear ribonucleoprotein M0.036
Lbrlamin B receptor0.031
Tra2btransformer 2 beta homolog (Drosophila)0.025
Hnrnpkheterogeneous nuclear ribonucleoprotein K0.022
Hnrpdlheterogeneous nuclear ribonucleoprotein D-like0.021
Hnrnpa2b1heterogeneous nuclear ribonucleoprotein A2/B10.021
Hmgb1high mobility group box 10.020
Ddx5DEAD (Asp-Glu-Ala-Asp) box polypeptide 50.020
Psip1PC4 and SFRS1 interacting protein 10.019
Sp3trans-acting transcription factor 30.018
Matr3matrin 30.018
Srsf2serine/arginine-rich splicing factor 20.015
Smarca5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 50.012
Mat2amethionine adenosyltransferase II, alpha0.011
Ilf2interleukin enhancer binding factor 20.011
Prpf4bPRP4 pre-mRNA processing factor 4 homolog B (yeast)0.011
Hnrnph2heterogeneous nuclear ribonucleoprotein H20.011
CtcfCCCTC-binding factor0.010
Syncripsynaptotagmin binding, cytoplasmic RNA interacting protein0.010
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Rattus norvegicus
NameDescriptionProbabilityFunc Analog Organism